KEGG   Pan troglodytes (chimpanzee): 458425
Entry
458425            CDS       T01005                                 
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
  KO
K12855  pre-mRNA-processing factor 6
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    458425 (PRPF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptr03041]
    458425 (PRPF6)
Spliceosome [BR:ptr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    458425 (PRPF6)
 Complex C
   U5 SnRNP specific factors
    458425 (PRPF6)
SSDB
Motif
Pfam: PRP1_N TPR_14 TPR_19 HAT_PRP39_N Suf HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C TPR_16 TPR_17 TPR_2 TPR_8 ARM_TT21_2nd TPR_1 TPR_CcmH_CycH ARM_TT21_C T7SS_EccA1_N ChAPs ARM_TT21_5th
Other DBs
NCBI-GeneID: 458425
NCBI-ProteinID: XP_016793773
Ensembl: ENSPTRG00000013765
VGNC: 6250
UniProt: K7BSZ8 A0A6D2VZZ2
LinkDB
Position
21:70327647..70377592
AA seq 941 aa
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYER
ARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEE
QKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHD
PHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CESAEPRHGELWCAVSKDIANWQKKIGDILRLVAGRIKNTF
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgaacaagaagaagaaaccgttcctagggatgcccgcgccactcggctacgtgccgggg
ctgggccggggtgccactggcttcaccacgcggtcagacattgggcccgcccgtgatgca
aatgaccctgtggatgatcgccatgcacccccaggcaagagaaccgttggggaccagatg
aagaaaaaccaggctgctgacgatgacgacgaggatctaaatgacaccaattacgatgag
tttaatggctatgctgggagcctcttctcaagtggaccctacgagaaagatgatgaggaa
gcagatgctatttatgcagccctggataaaaggatggatgaaagaagaaaagaaagacgg
gagcaaagggagaaagaagaaatagagaaatatcgtatggaacgccccaaaatccaacag
cagttctcagacctcaagaggaagttggcagaagtcacagaagaagagtggctgagcatc
cccgaggttggcgatgccagaaataaacgtcagcggaacccacgctatgagaagctgacc
cctgttcctgacagtttctttgccaaacatttacagaccggagagaaccatacctcagtg
gatccccgacaaactcaatttggaggtcttaacacaccctatccaggtggactaaacact
ccatacccaggtggaatgacgccaggattgatgacacctggcacaggtgagctggacatg
aggaagattggccaagcgaggaacactctgatggacatgaggctgagccaggtgtctgac
tccgtgagtggacagaccgtcgttgaccccaaaggctacctgacggatttaaattccatg
atcccgacacacggaggagacatcaatgatatcaagaaggcgcgactgctcctcaagtct
gttcgggagacgaaccctcatcacccgccagcctggattgcatcagcccgcctggaagaa
gtcactgggaagctacaagtagctcggaaccttatcatgaaggggacggagatgtgcccc
aagagtgaagatgtctggctggaagcagccaggttgcagcctggggacacagccaaggcc
gtggtagcccaagctgtccgtcatctcccacagtctgtcaggatttacatcagagcagca
gagctggaaacggacattcgtgcaaagaagcgggttcttcggaaagccctcgagcatgtt
ccaaactcggttcgcttgtggaaagcagccgttgagctggaagaacctgaagatgctaga
atcatgctgagccgagctgtggagtgctgccccaccagcgtggagctctggcttgctctg
gcaaggctggagacctatgaaaatgcccgcaaggtcttgaacaaggcgcgggagaacatt
cctacagaccgacatatctggatcacggctgctaagctggaggaagccaatgggaacacg
cagatggtggagaagatcatcgaccgagccatcacctctctgcgggccaacggtgtggag
atcaaccgtgagcagtggatccaggatgccgaggaatgtgacagggctgggagtgtggcc
acctgccaggccgtcatgcgtgccgtgattgggattgggattgaggaggaagatcggaag
catacctggatggaggatgctgacagttgtgtagcccacaatgccctggagtgtgcacga
gccatctacgcctacgccctgcaggtgttccccagcaagaagagtgtgtggctgcgcgcc
gcgtacttcgagaagaaccatggcactcgggagtccctggaagcactcctgcagagggct
gtggcccactgccccaaagcagaggtgctgtggctcatgggcgccaagtccaagtggctg
gcaggggatgtgcctgcagcaaggagcatcctggccctggccttccaggccaaccccaac
agtgaggagatctggctggcagccgtgaagctggagtccgagaatgatgagtacgagcga
gcccggaggctgctggccaaggcgcggagcagtgcccccaccgcccgggtgttcatgaag
tctgtgaagctggagtgggtgcaagacaacatcagggcagcccaggatctgtgcgaggag
gccctgcggcactatgaggacttccccaagctgtggatgatgaaggggcagatcgaggag
cagaaggagatgatggagaaggcgcgggaagcctataaccaggggttgaagaagtgtccc
cactccacacccctgtggcttttgctctctcggctggaggagaagattgggcagcttact
cgagcacgggccattttggaaaagtctcgtctgaagaacccaaagaaccctgggctgtgg
ttggagtccgtgcggctggagtaccgtgcggggctgaagaacatcgcaaatacgctcatg
gccaaggcgctgcaggagtgccctaactccggtatcctgtggtctgaggccatcttcctc
gaggcaaggccccagaggaggaccaagagcgtggatgccctgaagaagtgtgagcatgac
ccccatgtgctcctggccgtggccaagctgttttggagtcagcggaagatcaccaaggcc
agggagtggttccaccgcactgtgaagattgactcggacctgggggatgcctgggccttc
ttctacaagtttgagctgcagcatggcactgaggagcagcaggaggaggtgaggaagcgc
tgtgagagtgcagagcctcggcatggggagctgtggtgcgccgtgtccaaggacatcgcc
aactggcagaagaagatcggggacatccttaggctggtggccggccgcatcaagaacacc
ttctga

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