Pan troglodytes (chimpanzee): 459053
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Entry
459053 CDS
T01005
Symbol
PUM2
Name
(RefSeq) pumilio homolog 2 isoform X4
KO
K17943
pumilio RNA-binding family
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
459053 (PUM2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Rad26-like_N
PC4
Motif
Other DBs
NCBI-GeneID:
459053
NCBI-ProteinID:
XP_001140678
Ensembl:
ENSPTRG00000011692
VGNC:
6396
UniProt:
A0A6D2W4F7
H2QHH7
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All DBs
Position
12:102524517..102628004
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AA seq
1065 aa
AA seq
DB search
MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGTSHHSMSQP
IMVQRRSGQGFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGNFGTRD
AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGLPNGMDADCKDFNRTPGSRQ
ASPTEVVERLGPNTNPSEGLGPLPNPTANKPLVEEFSNPETQNLDAMEQVGLESLQFDYP
GNQVPMDSSGATVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSA
GLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQ
QAAAAANNTASQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAAAAANPTLA
FGQGLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAA
AAAAGGTASSLTGSTNGLFRPIGTQPPQQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLF
SHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSS
SSLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGS
GRYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNRF
PNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYV
IQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHV
LKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQ
TLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNV
VEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIM
HKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatgattttcaagctcttgcattagaatctcggggaatgggagagcttttgcct
accaaaaagttttgggaacctgatgattcaacaaaagatggacaaaaaggcatatttctt
ggggatgatgaatggagagagactgcatggggaacttctcaccattcaatgtcccagcct
attatggtacagagaagatctggacagggttttcatggaaacagtgaagtaaatgcaata
ctgtctccgcgatcagaaagtggaggccttggtgtgagcatggtagaatatgtattaagt
tcttctcctgctgataaattggattctcgatttaggaagggaaattttggcactagagat
gctgaaacagatggacctgagaaaggagatcaaaaaggcaaggcttctccatttgaggag
gaccaaaacagagatcttaaacaaggagatgatgatgattctaaaataaatggcagaggt
ttgccaaatggaatggatgccgattgcaaagattttaatcgtactcctggaagtcgtcaa
gcctctccaactgaagtagttgagcgcttgggccccaatactaatccctcagaaggactg
gggcctcttcctaatcctacagctaataaaccacttgttgaagaattttcaaatcctgaa
actcagaatctggatgccatggaacaagttggtctggaatccttacagtttgactatcct
ggtaatcaggtaccaatggactcttcaggagctactgtaggcctttttgactacaattcc
cagcagcagctctttcagaggactaatgcactaacagttcagcagttaactgcagctcaa
cagcagcaatatgcattagcagcagctcagcagccacatatagctggtgtattctcagca
ggccttgctccagctgcatttgtgccaaatccatacattattagtgctgctcctccaggg
accgatccgtatactgcagcaggattggctgcagcagctacattagcaggtccagcagtg
gttccacctcagtattacggcgttccatggggggtgtatccagccaacttatttcagcag
caagctgcagctgcggcaaataacacagccagtcagcaagcagcatcacaagctcagcct
ggacagcaacaggttctccgtgctggagcaggtcagcgtcctcttactcccaatcagggt
cagcaagggcagcaagcagaatcacttgcggcagctgcagcagcaaatccaacattggct
tttggtcagggtcttgctactggcatgccaggctatcaagtactagctccaactgcctat
tatgatcagactggtgccttagtggttggccctggagcaaggactggccttggagctcca
gttcggttaatggctccaacacctgttttaattagttcagcagcagcacaagctgcagca
gcagcagcagctggaggaactgcaagtagccttacaggcagcacaaatggtctgtttcgg
ccaattggcactcagccaccacagcagcagcagcaacagcagccaagcactaatctgcaa
tctaattcattttatggaagcagttctttgactaatagctcccagagtagttctttattt
tctcatggacctggtcaacctggaagtacatctcttggctttggaagtggtaactctttg
ggtgctgctataggctcagccctcagtggatttggttcatcagttggcagttctgcaagt
agtagtgccacaaggagagagtctctatctactagctctgacttgtacaaaagatctagt
agcagcctagcacccatagggcaaccattttacaatagtctgggattttcctcctctcca
agtccaataggcatgcctctgccaagccaaactccaggacattcacttacgccaccgcca
tcactttcatcacatggatcctcatccagtttgcatttaggaggactgacaaatggtagt
ggtcgatatatctctgcagcacctggagcagaagcaaaatatcgaagtgcttcaagcact
tccagtctatttagctccagcagccagctctttcctccttcccggcttcggtataatagg
tctgatattatgccttctggccgcagtagattattggaagatttcagaaacaaccgcttc
ccaaaccttcaacttagagacttgattggacatatagttgagttttctcaagaccagcat
ggttctagattcatacagcaaaagctagagagagctactccagctgagcgacagatggta
tttaatgaaattctgcaagcagcctatcaattaatgactgatgtttttggcaactatgtt
atacagaagttttttgagtttgggagtctggatcaaaaattagccctggctactcgtatt
cgtggtcatgttctacccttagccttgcagatgtatggctgccgtgttattcagaaagca
ttagaatctatttcttctgaccagcagagtgaaatggtaaaggagctggatggtcatgtg
ctcaaatgtgtgaaagatcagaatggaaaccatgttgtacaaaaatgtatcgaatgtgtt
cagccacagtcactacagttcatcattgatgctttcaagggacaagtatttgtgctttca
actcatccttatggctgcagagtaattcagcgcatcctagagcattgcactgcagaacag
accttacctatcttagaagaactccaccaacatacagagcagttggtacaggatcagtat
ggcaattacgttattcagcatgtactggaacacggtcgacctgaagacaagagcaaaatt
gtttccgaaatcaggggaaaggttttagccctgagtcaacacaaatttgccagcaatgta
gtagaaaagtgtgttactcatgcctcccgtgctgagagagctttactgattgacgaggtt
tgctgccagaatgatggtcctcacagtgccttatacaccatgatgaaggaccagtatgcc
aattacgtggttcaaaagatgattgatatggctgaacctgctcagagaaagataatcatg
cacaagattcgacctcacattactactttgcgcaaatacacatacgggaagcatatactg
gccaagttggaaaagtattatttgaagaatagcccggacctaggacctattggaggacca
ccaaatggaatgctgtaa
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