Entry |
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Symbol |
POLR1B
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Name |
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
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KO |
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Organism |
ptr Pan troglodytes (chimpanzee)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:ptr00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
459495 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ptr03021]
459495 (POLR1B)
Enzymes [BR:ptr01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
459495 (POLR1B)
Transcription machinery [BR:ptr03021]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
459495 (POLR1B)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
12:complement(10693964..10729487)
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AA seq |
1163 aa
MRGGCGNGTPATTSGVYRETGVRCAGGHMDPGSRWRNLPSGPSLKHLTDPSYGIPREQQK
AALQELTRAHVESFNYAVHEGLGLAVQAIPPFEFAFKDERISFTILDAVISPPTVPKGTI
CKEANVYPAECRGRRSTYRGKLTADINWAVNGISKGIIKQFLGYVPIMVKSKLCNLRNLP
PQALIEHHEEAEEMGGYFIINGIEKVIRMLIMPRRNFPIAMIRPKWKTRGPGYTQYGVSM
HCVREEHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQELIKGK
EDDSFLRNSVSQMLRIVMEEGCLTQKQVLNYLGECFRVKLNVPDWYPNEQAAEFLFNQCI
CIHLKSNTEKFYMLCLMTRKLFALAKGECMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGW
LVSIKIAFDKKAQKTSVSMNTDNLMKIFTMGIDLTKPFEYLFATGNLRSKTGLGLLQDSG
LCVVADKLNFIRYLSHFRCVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMN
HLTAVCEVVTQFVYTASIPALLCNLGVTPIDGAPHRSYSECYPVLLDGVMVGWVDKDLAP
GIADSLRHFKVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEE
LIGTMEQIFMNVAIFEDEVFAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMG
KQTMGFPILTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNYPIGTNAIVAVISYTGYD
MEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLVFGIKPGDPRVLQKLDDDGL
PFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDNIKVCSNDTGSGKFKCVCITMR
VPRNPTIGDKFASRHGQKGILSRLWPAEDMPFTESGMVPDILFNPHGFPSRMTIGMLIES
MAGKSAALHGLCHDATPFIFSEENSALEYFGEMLKAAGYNFYGTERLYSGISGLELEADI
FIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQPIGGRNVQGGIRFGEMERDALLAHGTSF
LLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKPPPSWSAMRNRKYNCTLCNRSDTIDTVSV
PYVFRYFVAELAAMNIKVKLDVV |
NT seq |
3492 nt +upstreamnt +downstreamnt
atgcgaggaggctgcggaaacgggactccggccactacttccggcgtgtaccgagagact
ggcgtccggtgtgcaggtggccacatggatcctggcagccggtggcggaacctgcccagc
gggcctagcctaaagcacttgactgacccctcttatggaatcccgcgggaacagcaaaag
gcagcgttgcaggagctgacgcgggcgcatgtggagtccttcaactacgctgtgcacgag
ggcctcggcctcgcggtgcaggctatacctccctttgaatttgctttcaaagatgagcgt
atctcttttactattctggatgctgttatcagtccacctacagttccaaaagggaccatc
tgcaaagaggccaatgtttatccagcagaatgccggggccgaaggagtacctaccgtggg
aagttgacagctgatatcaactgggcagtgaatggaatctcaaaaggaatcattaagcag
tttcttggctatgttcccatcatggtgaaatccaagctttgcaacttacgtaaccttccc
ccacaagccctcattgagcaccatgaggaggcggaggaaatggggggctattttataatc
aatggcattgaaaaagtcatccgaatgttgattatgcctcggagaaattttcccattgca
atgataagaccaaaatggaaaaccagagggcctggttatactcagtatggagtttcaatg
cactgtgtgagggaagaacattccgctgtcaatatgaacctccactacttggaaaatggc
actgttatgttgaactttatttaccggaaagaactgttctttcttcctttgggatttgca
cttaaggcacttgtcagcttttctgattatcagatctttcaggagctcatcaaaggaaaa
gaggatgattctttccttaggaactctgtttctcagatgttaaggattgtaatggaagag
ggttgtttgacacaaaaacaggtccttaactacctaggtgaatgcttcagagtaaaactc
aatgttcctgactggtacccaaatgagcaagctgcggagttcctgtttaaccagtgcatc
tgtatccacttgaaatccaatactgaaaagttttatatgctttgtctcatgacgcgaaag
ctctttgctttagccaaaggagagtgcatggaggacaatcctgatagtttggtgaaccag
gaagtcctcacaccgggtcagctcttccttatgttcctgaaggaaaaactggaaggttgg
ttagtgtctattaaaatagcttttgataagaaggctcagaagaccagtgtttccatgaac
actgacaatttgatgaagatttttacaatgggcatagaccttaccaaaccatttgaatac
ctttttgctacggggaatctgcgttctaaaacaggtcttggcctcctacaagattctgga
ctttgtgttgtggctgacaagctgaacttcatacgctacctctcccatttccgctgcgtg
cacagaggggctgattttgccaagatgaggaccaccacagtacgcaggctgctgccagag
tcctggggcttcctttgtcccgtgcataccccagacggggagccctgtggcctgatgaac
cacctaactgccgtatgtgaggttgtcacacagtttgtgtatacggcatctattccagct
ttactatgcaacttgggggtcactcccattgatggagctccccaccgatcatacagtgag
tgctaccctgtcctgctggacggtgtcatggttggctgggtggataaggatcttgctcca
ggcatcgcagattctcttcgtcattttaaggtgttgagagagaaaagaattcctccctgg
atggaagtggtccttatacccatgacaggaaaaccaagtctgtacccaggattgttcctt
tttaccactccttgtagactggtacggcctgtgcagaacttagaattgggcaaagaagag
ctaattggaactatggaacagatcttcatgaatgtcgctatctttgaggatgaggttttt
gctggagttaccacacaccaggaactctttccacacagcctgctgagtgtgattgccaac
ttcatccctttctctgatcacaaccagagtccacggaacatgtaccaatgccagatgggt
aagcaaactatgggctttccaattctcacttatcaagaccgatcggataacaaactgtat
cgtcttcagactcctcagagtcccttggtgagaccctccatgtatgattattatgacatg
gataactatccaattgggaccaatgccatcgttgctgtgatttcttacactggctatgat
atggaagatgccatgattgtgaataaggcctcttgggaacgaggctttgcccatggaagt
gtctacaagtctgagttcatagacctctctgaaaaaattaaacaaggagatagtagcctg
gtgtttggaatcaaacctggtgacccacgcgttttgcagaagttagatgacgatggattg
ccgtttataggagcaaaactgcagtacggagatccgtattacagctacctaaacctcaac
accggggaaagttttgtgatgtactataagagtaaagaaaattgtgttgtggataacatc
aaagtgtgcagtaatgacactgggagtggaaaattcaagtgtgtttgcatcactatgaga
gtgcctcggaacccaactatcggagataaatttgccagtcgccatgggcagaagggcatt
ttaagcagattgtggccggctgaggacatgccttttactgagagtgggatggtcccagac
attctgttcaatccccatggttttccatcccgcatgaccattgggatgttaattgagagt
atggccgggaagtctgcagctttgcatggtctctgccatgatgctacacccttcatcttc
tcagaggagaactcggccttagaatactttggtgagatgttaaaggctgctggctacaat
ttctatggcaccgagaggttatatagtggcatcagtgggctagaactggaagcagacatc
ttcataggagtggtttattatcagcgcttacgccatatggtctcagacaaatttcaggta
aggacaactggagcccgagacagagtcaccaaccagcctattgggggaagaaatgtccag
ggtggaatccgttttggggagatggaacgggatgcgcttttagctcatggtacatctttt
ctccttcatgaccgcctcttcaactgctcagatcggtcggtagcccatgtgtgtgtgaag
tgtggcagtttactctctccactgttggagaagccacccccttcttggtctgccatgcgc
aacagaaaatacaactgtaccctgtgtaatcgcagtgacactatcgatactgtttctgtg
ccttatgtttttcggtattttgtagctgaactggcagctatgaacatcaaagtgaaactg
gatgttgtttaa |