Pan troglodytes (chimpanzee): 459657
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Entry
459657 CDS
T01005
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X3
KO
K11138
telomere-associated protein RIF1
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
459657 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptr03032
]
459657 (RIF1)
DNA replication proteins [BR:
ptr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
459657 (RIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
NICE-1
Motif
Other DBs
NCBI-GeneID:
459657
NCBI-ProteinID:
XP_001137674
Ensembl:
ENSPTRG00000012534
VGNC:
2803
UniProt:
A0A2I3TVH6
A0A6D2Y1B4
LinkDB
All DBs
Position
13:53444676..53568760
Genome browser
AA seq
2473 aa
AA seq
DB search
MTARGQSPLAPLLETLEDPSASHGGQTDAYLTLTSRMTGEEGKEVITEIEKKLPRLYKVL
KTHISSQNSELSSAALQALGFCLYNPKITSELSEANALELLSKLNDTIKNSDKNVRTRAL
WVISKQTFPSEVVGKMVSSIIDSLEILFNKGETRSAVVDFEALNVIVRLIEQAPIQMGEE
AVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLISELQKL
FMSKNETYVLKLWPLFVKLLGRTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPDILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQGNSCHVATSPGLNPMTPVHKGASSPYGAPGTPRMNLSSNLGG
MATIPSIQLLGLEMLLHFLLGPEALSFAKQNKLVLSLEPLEHPLISSPSFFSKHANTLIT
AVHDSFVAVGKDAPDVVVSAIWKELISLVKSVTESGNKKEKPGSEVLTLLLKSLESIVKS
EVFPVSKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNFLECGVSD
ERFFLSLESLVGCVLSGPTSPLAFSDSVLNVINQNAKQLENKEHLWKMWSVIVTPLTELI
NQTNEVNQGDALEHNFSAIYGALTLPVNHIFSEQRFPVATMKTLLRTWSELYRAFARCAA
LVATAEENLCCEELSSKIMSSLEDEGFSNLLFVDRIIYIITVMVDCIDFSPYNIKYQPKV
KSPQRPSDWSKKKNEPLGKLTSLFKLIVKVIYSFHALSFKEAHSDTLFTIGNSITSIISS
VLGHISLPSMIRKIFATLTRPLALFYENSKLDEVPKVYSSLNNKLEKLLGEIIACLQFSY
TGTYDSELLEQLSPLLCIIFLHKNKQIRKQSAQFWNATFAKVMMLVYPEELKPVLTQAKQ
KFLLLLPGLETVEMMEESSGPYSDGTENSQLNVKISGMERKSNGKRDSFLAQTKNKKENM
KPAAKLKLESSSLKVKGEILLEEEKSTDFVFIPPEGKDAKERILTDHQKEVLKTKRCDIP
AMYNNLDVSQDTLFTQYSQEEPMEIPTLTRKPKEDSKMMITEEQMDSDIVIPQDVTEDCG
MAEHLEKASLSNNECGSLDKTSPEMSNSNNDERKKALISSRKTSTECASSTENSFVVSSS
SVSNTTVAGTPPYPTSRRQTFITLEKFDGSENRPFSPSPLNNISSTVTVKNNQETMIKTD
FLPKAKQREGTFSKSDSEKVVNGTKRSSRRAGKAEQTGNKRSKPLMRSEPEKNTEESVEG
IVVLENNPPGLLNQTECVSDNQVHLSESTMEHDNTKLKAATMENAVLLETNTVEEKNVEI
NLESKENTPPVVISADQMVNEDSQVQITPNQKTLRRSSRRRSEVVESTTESQDKENNHQK
KERRKEEEKPLQKSPLHIKDDVLPKQKLIAELTLQENLIEKGSNLHEKTLGETSANAETE
QNKKKADPENIKSEGDGTQDIVDKSSEKLVRGRTRYQTRRASQGLLSSIENSESDSSEAK
EEGSRKKRSGKWKNKSNESVDIQDQEEKVVKQECIKAENQSHDYKASSEEDVSIKSPICE
KQDESSTVICQDSTVTSDLLQVPDDLPNVCEEKNETSKYAEYSFTSLPVPESNLRTRNAI
KRLHKRDSFDNCSLGESSKIGISDISLLSEKTFQTLECQHKRSRRVRRSKGCDCCGEKSQ
PQEKSLIGLKNTENNDVEISETKKADVQAPVSPSETSQANPYSEGQFLDEHHSVNFHLGL
KEDNDTINDSLIVSETKSKENTMQESLPSGIVNFREEICDMDSSEAMSLESQESPNENFK
TVGPCLGDSKNVSQESLETKEGKPEETPKMELSLENVAVEGNACKVTESNLEKAKTMELD
VGNEASFHGQERTKTGISEEAAIEENYKINDDSEADTAKLNAKEVATEEFNSDISLSDNT
TPVKLNAQTEISEQTAAGELDGGNDVSDLHSSEETNTKMKNYEEMMIGEAMAETGHDGET
ENEGITTKTSKPDEAETNMLTAEMDNFVCDTVEMSTEEGIIDANKTETNTEYSKSEEKLD
NNQMVMESDILQEDYHTSQKVEEPSQCLASGTAISELIIEDNNASPQKLRELDPSLVSAN
DSPSGMQTRCVWSPLASPSTSILKRGLKRSQEDEISSPVNKVRRVSFADPIYQAGLADDI
DRRCSIVRSHSSNSSPIGKSVKTSPTTQSKHNTTSAKGFLSPGSRSPKFKSSKKCLISEM
AKESIPCPTESVYPPLVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTAS
EIKTLPIRSPKVSNVKKALRIYHEQQVKTRGLEEIPVFDISEKTVNGIENKSLSPDEERL
VSDIIDPVALETPLSKNLVAQISALALQLDSEDLHNYSGSQLFEMHEKLSCMANSVIKNL
QSRWRSPSHENSI
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaggggtcagagccccctcgcgccgctgttggagactttggaagacccttct
gcctcccatggagggcagactgacgcttacctgactctgaccagtcgtatgactggagaa
gaaggaaaagaagtaattacagaaattgagaaaaaacttcctcggctgtacaaagtttta
aagactcacatttccagtcaaaactcggagctgagtagtgctgctctacaagcactgggg
ttttgcttatataatcccaaaattacctcagaattatcagaggcaaatgctctagaattg
ctttcaaaattgaatgataccattaagaattcagacaaaaatgtacgtactagagcactt
tgggtgatatctaagcagacatttccctctgaagtggttggcaaaatggtatccagtata
attgattcattagaaatactgtttaacaaaggagagacgcgttctgctgttgttgatttt
gaagcattaaatgttatcgtaaggctaattgaacaagccccaattcaaatgggagaagag
gcagtgaggtgggcaaaactggtcatacctttagtggttcattcagcacaaaaggtacat
ttgcggggagcaactgctctggagatgggaatgccattattgcttcagaaacagcaagaa
atagcatctattacggagcagcttatgactactaaattaatctcagaacttcagaagcta
tttatgagtaaaaatgagacttacgtgttaaaattatggcctttgtttgtcaaactactt
ggaaggaccttgcatcgaagtgggagtttcatcaattctctcttgcaactagaagaactt
ggatttcgtagtggagcacccatgattaaaaagatagcttttattgcttggaagagttta
atagataattttgctttaaatccagatatactatgtagtgcaaaaagactcaagttgtta
atgcagcctttgagttccatccatgtgagaacagaaactctagcattaacaaaactagaa
gtctggtggtatttactgatgagacttggacctcatcttcctgctaattttgaacaggtt
tgtgtgcctctgattcaaagtacaataagcattgattctaatgcctcacctcagggcaat
tcgtgtcatgtagctacatctccaggtttaaatcctatgactcctgtacacaaaggtgct
tcctccccgtacggagccccgggaactccccgaatgaacctgagttcgaatttaggtgga
atggccacaatcccatccattcaacttttgggacttgaaatgttgcttcatttcttgttg
ggtccggaagccttgagttttgctaagcaaaataaacttgtgctgagcttagagccactg
gaacatccgttaatcagcagcccttcctttttttccaaacatgcaaatacacttatcact
gctgttcatgatagctttgttgcagttggaaaagatgcccccgatgtggttgtcagtgct
atctggaaggagctaattagcttggtgaagtcagttactgaatcaggtaacaaaaaagag
aaaccaggttctgaagttttgactctcttattaaagtctttggaaagcatagtaaagtct
gaagtatttcctgtatcaaaaacgctggtcctcatggaaattacaattaaaggacttcct
cagaaagtattaggttcaccagcatatcaggttgctaatatggatattcttaatggtact
ccagctttgttcttaattcaattaattttcaacaattttttggaatgtggtgtatcagat
gaaaggttctttctcagtttggaatcacttgtaggctgtgttctttctggtccaacttca
ccactagctttcagtgactcagttttaaatgttattaatcaaaatgcaaagcagttggaa
aataaggagcatctctggaaaatgtggagtgttatagtcaccccattaactgaattgatt
aatcagaccaatgaagtaaatcaaggtgatgccttagaacataattttagtgccatctat
ggtgcattgactttaccagtaaaccacattttttcagaacagagatttccagtggccacc
atgaagactttgcttagaacttggtcagaattatatagagcatttgctcgttgtgctgct
ttggtggcaacagcagaagagaacttgtgctgtgaggaactttcttccaagataatgtcc
agtttggaagatgaaggcttttctaatttgttgttcgtggatagaattatttatattatt
actgtaatggttgattgcattgacttctcaccatataatattaaatatcagcccaaagtt
aaatcaccacagagaccttcagattggtccaaaaagaagaatgagcccctagggaaattg
acttctttatttaaacttattgtgaaagtgatctattctttccacgcactgagcttcaag
gaagcacattccgataccctcttcactattggcaactcaatcaccagcattatttccagt
gtacttggacatatttctttgccttctatgatccgaaaaatatttgcaactttaacaaga
cctctggcattattttatgaaaactcaaagcttgatgaagttcctaaagtatatagttct
ctgaacaacaagttagaaaagctactgggagaaattattgcttgtctgcaattcagctac
accggaacttatgatagtgaacttcttgaacaactctccccactattatgcataatattt
ctgcacaagaataaacagattcgaaaacagagtgctcagttctggaatgccacttttgct
aaagtgatgatgttggtttatcctgaagagttaaaaccagtactaacacaagccaaacaa
aaatttctgctcctgttgcctggtttggaaactgttgaaatgatggaggaatccagtgga
ccatattctgatggaacagaaaattcacaactaaatgtgaagataagtggcatggagaga
aaatcaaatggaaaaagagattcatttttggcacaaacaaagaataaaaaagaaaatatg
aaaccagcagccaaactgaaacttgaatcttcatctttaaaagtaaagggtgaaattctt
ttggaagaggaaaagtctactgactttgtgtttatacctccagaaggaaaagatgcaaag
gaaagaatattaactgatcatcaaaaagaagttctcaaaacaaagcggtgtgatattcct
gccatgtataataatctggatgtttcccaagataccttatttactcagtatagtcaggaa
gagcctatggaaattcctactttaaccagaaaaccaaaggaggattctaagatgatgatt
acggaggagcaaatggacagtgacattgtcattcctcaagatgtcacggaagactgtggt
atggctgaacatcttgaaaaggcctccctttcgaataatgagtgtggttctcttgacaaa
accagtccagaaatgtcgaacagtaataatgatgaaagaaaaaaagctttaatttcatca
aggaaaacatcaactgaatgtgcatctagtacagaaaattctttcgttgtcagcagtagt
tcagtttctaataccactgttgctggaactcccccataccctacaagtcggaggcaaacc
tttattactttggagaagtttgatggttcagaaaatagaccttttagtccatcccccttg
aataatatttcatcaactgttacagtgaaaaataaccaggaaacgatgattaaaacagat
tttctaccaaaagcaaagcaaagagaagggactttttcaaaatctgattctgaaaaagta
gtgaatggaactaagagatcaagccggagagctggtaaagctgaacaaacagggaataaa
aggtctaagcccttaatgagatctgagccggagaaaaatactgaggaatctgttgaaggc
attgtagtcttagaaaataacccacctggtttgcttaatcaaacagaatgtgtgtcagat
aatcaggttcatctttctgaatctacaatggagcatgacaatacaaagcttaaagcagca
acaatggaaaatgctgtattattggaaactaatactgtagaggagaaaaatgtagaaatt
aatttggaatccaaagagaatacacccccagtagtaatatcagcagatcaaatggtaaat
gaggatagtcaggttcagataactccaaatcagaaaacccttagacggtcttcaaggcga
cgttcagaagtggtagagtctaccactgaaagccaagataaggaaaataatcatcaaaaa
aaggaacgacgtaaggaagaagaaaaacctcttcagaagagtccattgcatataaaagat
gatgtgttacctaaacaaaaactgattgctgaactaactctacaggagaatttaattgag
aaaggaagtaatttacatgagaagactcttggggaaactagtgctaatgcagaaactgaa
caaaataaaaaaaaggcagaccctgagaacattaagtctgagggggatggtacccaggac
attgtagataagtcctctgagaaactagtcagaggccgaacacggtatcaaactagaaga
gcatctcagggtttgctttccagcattgaaaactcagaatctgatagttcggaggcaaaa
gaagaaggttctaggaagaagagatctggaaaatggaaaaacaaaagcaatgaaagtgtt
gacattcaagatcaagaagagaaagtggtgaaacaggaatgtataaaagctgaaaatcag
tcacatgattataaagcaagttctgaagaagatgtaagcataaaatctccgatttgtgaa
aaacaagatgaaagtagtactgtaatatgtcaggattctacagtaacttcagatttgttg
caagttcctgatgatttaccaaatgtgtgtgaggaaaaaaatgaaactagcaaatatgca
gaatattcctttacaagtctacctgtgccagaatcaaatctaaggactagaaatgccatt
aagagattacataagcgagactcttttgataattgtagtttgggagaatcctcaaaaata
gggatatcagatatttctttgctttcagaaaaaacttttcaaacacttgaatgccaacac
aagagaagtaggagggtgaggagatctaaaggttgtgattgctgtggggaaaaatcacaa
cctcaggaaaagtcactcattgggttaaagaatacagaaaataatgacgtagaaattagt
gaaacaaaaaaggcagatgtgcaagcacctgtaagcccatcagaaacttctcaagctaat
ccatattctgaaggacaatttttagatgaacatcatagtgtgaattttcatttgggtctc
aaagaggataatgatactattaatgattcattaattgtttctgaaaccaaatcaaaagaa
aacactatgcaagaatctcttccttctggaatagtaaactttagagaggaaatttgtgat
atggattctagtgaagcaatgtctcttgaaagccaagagtcacctaatgaaaattttaaa
actgttggcccgtgtttaggagactcgaaaaatgtttcacaggaatctttggagacaaaa
gaaggaaaaccagaagaaaccccaaaaatggaactgagtctagagaatgttgctgttgaa
ggaaatgcatgtaaagtaacagaatccaatctagagaaagcaaaaactatggaattggat
gtaggaaatgaagctagcttccatggacaagagagaaccaaaactggtatttctgaagaa
gcagcaatagaagaaaattataaaataaatgatgactctgaagcagacacagctaaactg
aatgccaaagaagtagcaactgaggaatttaattcagatattagtctttctgataatact
acacctgtaaaattgaatgctcaaactgagatttctgaacaaacagcagctggggaacta
gatggaggaaatgatgtatctgatctacactcatctgaagaaacgaataccaaaatgaaa
aattatgaagaaatgatgatcggtgaggcaatggctgaaactggccatgatggtgaaaca
gagaatgagggcataactaccaaaacctcaaagcctgatgaagctgaaacaaacatgttg
actgcagaaatggacaactttgtttgtgacacagttgaaatgagcactgaagaaggaatc
attgacgctaataaaactgaaacaaatactgagtatagtaaatctgaagaaaaattagat
aacaatcaaatggtaatggaaagtgatattttacaggaagattaccatacttcacagaaa
gtagaggaaccatcacagtgtctggcatctggaacagctatctctgaactaataatagaa
gacaataatgcatctcctcaaaaactaagggaacttgatccttcacttgtgtcagcaaat
gacagtcctagtggcatgcagacacgctgtgtctggtctcctttggcttctccgtctacg
agcattttaaagagaggactaaaaagatcccaagaagatgaaatctcatcacctgttaat
aaggttcgccgtgtctcctttgcagatccaatataccaagcaggattggcagatgacatt
gatagacggtgctctattgttaggtctcattcttccaatagttctcccataggaaaaagt
gttaaaacttctcctactacacaatctaagcataataccacttcagccaaaggatttctg
tccccaggatcacgtagccctaaatttaagagctcaaagaagtgtttaatttcagaaatg
gccaaagaatccataccatgcccaacagaaagtgtttacccaccattggtgaactgtgtg
gcaccagttgacatcattttacctcagattacatcaaacatgtgggcaagaggcctggga
caactcattagagctaagaatataaaaactattggtgatttgagtactcttacagcatct
gaaataaaaactcttcctatccgttctccaaaagtgtccaatgtaaaaaaggctctcaga
atatatcatgagcagcaggtgaagactcgtggactagaagagattccagtttttgatatt
tctgaaaaaacagtaaatggaatagaaaataaatctttgtcacctgatgaagaaagactt
gtctcagatataattgatcctgttgctttagaaactccattatccaaaaaccttgtggca
cagattagtgctcttgctcttcagctggattcagaagatcttcataattattcaggaagc
caactatttgaaatgcacgagaaactaagttgtatggcaaactctgtaataaaaaatcta
cagtcacgttggagatcaccatcccatgaaaattctatttag
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integrated database retrieval system
