Pan troglodytes (chimpanzee): 459930
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Entry
459930 CDS
T01005
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptr03036
]
459930 (SMARCAL1)
Chromosome and associated proteins [BR:
ptr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
459930 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
Flavi_DEAD
ERCC3_RAD25_C
DUF6615
Motif
Other DBs
NCBI-GeneID:
459930
NCBI-ProteinID:
XP_001153008
Ensembl:
ENSPTRG00000012898
VGNC:
10370
UniProt:
H2R0H8
A0A6D2XMT7
LinkDB
All DBs
Position
13:118674481..118745484
Genome browser
AA seq
954 aa
AA seq
DB search
MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQRTSSGISIAGNPFQAKQGPSQNFPRE
SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHSPRSQMALT
GISPPLAQSPPEVPKQQLLSYELGQGHAQASPEIRFTPFANPTHKPLAKPKSSQETPAHS
SGQPPRDAKLEAKTAKASPSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
CVRNGDRFQVLIGYNAELIAVFKTLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
PLEWAYGSSESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
DSRRYDVKTRKWSFLLEEHSKLIAKVRCLPQVQLDPLPMTLTLAFASQLKKTSLSLTPDV
PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
LESGREKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYKDPKQQKIYDLFQKSFEKEGSDMELL
EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcctcttacagaggagcagaggaaaaagattgaagagaatcgacaaaaggct
ctggcccgcagagctgagaagttattggcagaacagcatcagaggactagctcgggcatc
tccattgctggcaacccattccaggccaagcaaggcccatcccaaaatttcccaagggag
tcttgtaagccagtgagccatggtgtcattttcaagcaacagaatctcagtagctcatct
aatgctgaccaaagacctcatgattcccacagttttcaggcaaagggaatatggaaaaag
ccagaagaaatgcccacagcctgcccaggccacagtccacgtagtcaaatggctctcact
ggaatctctcctcccttggcacaaagtcctccagaggtccctaaacaacagctcttgagt
tatgagttaggtcaaggtcatgctcaggcttcacctgagatcaggttcacaccctttgct
aacccaactcataagcctctggccaaaccaaagagttcccaagagacaccagctcattcc
tctggacagcctcccagggatgctaagttagaggccaagacagcaaaagcctccccttcg
gggcagaacatttcttacatccattctagctcagagagtgtaacgcccaggacagaagga
agactccaacagaagtcagggtcctcagtccaaaaaggagtgaactctcagaagggaaag
tgcgtaaggaacggcgatcgtttccaggtgttgattgggtacaatgcggaactcattgca
gtgtttaagaccctgcccagcaagaattatgatcctgacaccaagacgtggaacttcagc
atgaatgactatagtgccttgatgaaagcagcccagagcctccccacggtcaacctgcag
cctctggaatgggcctatggcagcagcgagtcaccctccaccagcagtgagggacaggcc
ggccttccatcagctccatccctttcgtttgtcaaagggcgatgcatgctcatctccagg
gcctacttcgaggcagacatcagttattcacaggaccttattgcgctttttaaacagatg
gattccagaagatatgatgtcaagaccaggaagtggagctttctcttagaagagcacagt
aaactaattgcaaaggtgcgctgcctcccacaagttcagctggaccctctgcccatgact
ctcaccctggcgtttgcttctcagctcaagaagacatctctcagtctcacgccagatgtc
ccagaggcagacctttctgaagtggaccccaagctcgtgtctaatctgatgccctttcag
agagctggagtcaattttgccatagccaaaggaggccgcctgctgctcgctgacgacatg
ggcctggggaagaccatccaagccatctgcatcgcagccttttaccggaaggagtggccg
ctcctggtggtggtgccatcctccgtgcgcttcacctgggagcaggccttccttcggtgg
ctgccatctctgagcccagattgcatcaacgtcgtggtgactgggaaggaccgcctgaca
gctggcctgatcaacattgtcagctttgaccttcttagcaagttggaaaaacagctaaaa
accccttttaaagttgtcatcattgatgaatctcacttcctcaaaaacagtaggactgcc
cgctgtcgagcagctatgccggtcctaaaggttgccaagagggtgatcctgttgtcgggc
acaccagccatgtcccggcccgcagagctctacacgcagatcatcgcagtcaagccaact
ttcttcccccagtttcatgcctttggacttcgctactgtgatgccaaacggatgccttgg
gggtgggactactcaggttcctccaacctgggagagctgaagctcctgctggaggaagca
gtcatgctgcggcgcctcaagtccgacgtcctttcccagctgcctgccaagcagcgcaag
atagtggtgattgccccaggacggatcaatgccaggaccagagctgccctggatgctgca
gccaaggaaatgaccaccaaggacaaaactaaacagcagcagaaagatgccctcattctc
ttcttcaacagaacagctgaagctaaaatcccgtctgtcattgaatatatcttggaccta
ctggaaagtggaagagagaagtttttagtatttgcacaccataaggtggtcctggacgca
attacgcaagagcttgagagaaagcacgtgcagcacatccgcatcgatggctccacctca
tcagctgagcgggaggacctgtgccagcagttccaactgtcggagaggcatgccgtggcc
gtgctgtccatcaccgctgccaatatgggcctcaccttctcctcggctgacctggtggtg
tttgctgagctgttttggaacccaggggtgctgatccaggctgaggaccgcgtgcaccgc
attggacagaccagctccgtgggcattcactacctcgtggcaaagggcacagctgatgac
tacctttggcccctgattcaagagaagattaaagttctggcggaagccgggctttctgag
accaatttttcagaaatgacagaatccactgattacctctacaaggacccaaagcagcag
aagatctacgacctattccagaagtcctttgagaaagaaggaagtgatatggagctcctg
gaagcagcagagtcctttgacccaggaagtgcttcaggaacatctggaagtagttcccag
aacatgggagacaccctggatgaaagctcattgacagccagtccacagaagaaaaggaga
tttgaattttttgataactgggacagctttacgtctcccctgtaa
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