Pan troglodytes (chimpanzee): 459988
Help
Entry
459988 CDS
T01005
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X4
KO
K06237
collagen type IV alpha
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04151
PI3K-Akt signaling pathway
ptr04510
Focal adhesion
ptr04512
ECM-receptor interaction
ptr04820
Cytoskeleton in muscle cells
ptr04926
Relaxin signaling pathway
ptr04933
AGE-RAGE signaling pathway in diabetic complications
ptr04974
Protein digestion and absorption
ptr05146
Amoebiasis
ptr05165
Human papillomavirus infection
ptr05200
Pathways in cancer
ptr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
459988 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
459988 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
459988 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
459988 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
459988 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
459988 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
459988 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
459988 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
459988 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
459988 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
459988 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptr04147
]
459988 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
ptr00536
]
459988 (COL4A3)
Exosome [BR:
ptr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
459988 (COL4A3)
Glycosaminoglycan binding proteins [BR:
ptr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
459988 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
459988
NCBI-ProteinID:
XP_009442736
Ensembl:
ENSPTRG00000012992
VGNC:
10718
LinkDB
All DBs
Position
13:129409067..129557681
Genome browser
AA seq
1635 aa
AA seq
DB search
MSARTAPGPQVLLLPLLLVLLAAAPVASKGCVCKDKGQCFCDGAKGEKGEKGFPGPPGSP
GQKGFTGPEGLPGPQGPKGFPGLPGLTGSKGVRGISGLPGFSGSPGLPGTPGNTGPYGLV
GVPGCSGSKGEQGFPGLPGTPGYPGIPGAAGLKGQKGAPAKGEDIELDAKGDPGLPGAPG
PQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKGHMGERVIGHKGERGVKGLTGPPGP
PGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPSGLPGESYGSEKGAPGDPGPQGKPG
KDGVPGFPGSEGVKGNRGFPGLMGEDGIKGQKGDIGPPGFRGPTEYYDTYQEKGEEGTPG
PPGPRGARGPQGPSGPPGVPGSPGSSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSP
GCAGSPGLPGSPGPPGPPGDIVFRKGPPGDRGLPGYLGSPGIPGVDGPKGEPGLLCTQCP
YIPGPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQGDPGLKGEK
GETLQPEGQVGAPGDPGLRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGD
PGSPGSPGPAGPAGPPGYGPQGEPGPQGTQGVPGAPGPPGEAGPRGELSVSTPVPGLPGP
PGPPGHPGPQGPPGDKGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPAVAMPGGPGTP
GFPGERGNSGEHGEIGLPGLPGLPGTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRG
AQGLPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSPGMPGHQGEMGPPGQRGY
PGNPGILGPPGEDGVIGMMGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGE
QGDKGNPGPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGP
RGDLGSTGNPGEPGLRGIPGIMGNMGMPGSKGKRGTLGFPGRAGRPGLPGIHGLQGDKGE
PGYSEGTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKP
GPHGDLGFKGIKGLLGPPGIRGPPGLPGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLL
RAPPGPRGNPGAQGAKGDRGAPGFPGLPGRRGAMGEAGPRGPTGIEGFPGPPGLPGAIIP
GQTGNRGPPGSRGSPGEPGPPGPPGSHVIGIKGDKGSMGHPGLKGPPGTAGDMGPPGRLG
APGTPGLPGPRGDPGFQGFPGVKGEKGNPGFLGSIGPPGPIGPKGLPGVRGDPGTLKIIS
LPGSPGPPGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGKPGTPGPAGEKGNKGSKG
EPGPAGSDGLPGLKGKRGDSGSPATWTTRGFVFTRHSQTTAIPSCPEGTVPLYSGFSFLF
VQGNQQAHGQDLGTLGSCLQRFTTMPFLFCNVNDVCNFASRNDYSYWLSTPALMPMNMAP
ITGRALEPYISRCTVCEGPAIAIAVHSQTTDIPPCPHGWISLWKGFSFIMFTSAGSEGTG
QALASPGSCLEEFRASPFLECHGRGTCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGEL
EKIISRCQVCMKKRH
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccggaccgcccccgggccgcaggtgctcctgctgccgctcctgctggtgctc
ctggcggcggcgcccgtagccagcaagggttgtgtctgtaaagacaaaggccagtgcttc
tgtgatggggccaaaggggagaagggggagaagggctttcctggaccccccggttctcct
ggccagaaaggattcacaggtcctgaaggcttgcctggaccacagggacccaagggcttt
ccaggacttccaggactcacgggttccaaaggtgtaaggggaataagtggattgccagga
ttttctggttctcctggacttccaggcaccccaggcaataccgggccttacggacttgtt
ggtgtaccaggatgcagtggttctaagggtgagcaggggtttccaggactcccagggaca
ccgggctacccagggatcccgggtgctgctggtttgaaaggacaaaagggtgctcctgct
aaaggagaagatatagaacttgatgcaaaaggcgaccccgggttgccaggggctccagga
ccccagggtttgccaggtcctccaggttttcctgggcctgttggcccacctggtcctccg
ggattctttggctttccaggagccatgggacctagaggacctaagggtcacatgggtgaa
agagtgataggacataaaggagagcggggtgtgaaagggttaacaggacccccgggacca
ccaggaacagttattgtgaccctaactggcccagataacagaacggacctcaagggggaa
aagggagacaagggagcaatgggcgagcctggacctcctggaccctcaggactgcctgga
gaatcatatggatctgaaaagggtgctcctggagaccctggcccacagggaaaacccgga
aaagatggtgttcctggcttccctggaagtgagggagtcaagggcaacaggggtttccct
gggttaatgggtgaagatggcattaagggacagaaaggggacattggccctccaggattt
cgtggtccaacagaatattatgacacataccaggaaaagggagaggaaggcactccaggc
ccaccagggcccagaggagctcgtggcccacaaggtcccagtggtccccccggagttcct
ggaagtcctggatcatcaaggcctggcctcagaggagcccctggatggccaggcttgaaa
ggaagtaaaggggaacgaggccgcccaggaaaggatgccatggggactcctgggtcccca
ggttgtgctggttcaccaggtcttccaggatcaccgggacctccaggacctccaggtgac
atcgtttttcgcaagggtccacctggagatcgcggactgccaggctatctagggtctcca
ggaatcccaggagttgatgggcccaaaggagaaccaggcctcctgtgtacacagtgccct
tatatcccagggcctcccggtctcccaggattgccagggttacatggtgtaaaaggaatc
ccaggaagacaaggtgcagctggcttgaaaggaagcccagggtccccaggaaatacaggt
cttccaggatttccaggtttcccaggtgcccagggtgacccaggacttaaaggagaaaaa
ggtgaaacacttcagcctgaggggcaagtgggtgccccaggtgacccagggctcagaggc
caacctgggagaaagggcttggatggaattcctggaactccgggagtgaaaggattacca
ggacctaaaggcgaactggctctgagtggtgagaaaggggaccaaggtcctccaggggat
cctggctcccctgggtccccaggacctgcaggaccagctggaccacctggctatggaccc
caaggagaacctggtccccagggcacgcaaggagttcctggagcccccggaccacccgga
gaagccggccctaggggagagctcagtgtttcaacaccagttccaggcctaccaggacct
ccagggccccctggccatcctggcccccaaggtccacctggagacaaaggttttccaggt
acaaaaggatcactgggttgtcctggaaaaatgggagagcctgggttacccggaaagcca
ggcctcccaggtgccaagggagaaccagcagtagccatgcctggaggaccaggaacacca
ggttttccaggagaaagaggcaattctggggaacatggagaaattggactccctggactt
ccaggtctccctggaactccaggaaatgaagggcttgatggaccacgaggagatccaggg
cagcctggaccacctggagaacaaggacccccaggaaggtgcatagagggtcccagggga
gcccaaggacttccaggcttaaatggattgaaagggcaacaaggcagaagaggtaaaacg
gggccaaagggagacccaggaattccaggcttggatagatcaggatttcctggagaaact
ggatcaccaggaatgccaggtcatcaaggtgaaatgggaccaccgggtcaaagaggatat
ccaggaaatccgggaattttagggccaccaggtgaagatggagtgattgggatgatgggc
tttcctggagccattggccctccagggccccctgggaacccaggcacaccagggcagagg
gggagccctggaattccaggagtaaagggccagagaggaaccccaggagccaagggggaa
caaggagataaaggaaatcccgggccttctgagatatcccacgtaataggggacaaagga
gaaccaggtctcaaaggattcgcaggaaatccaggtgagaaaggaaacagaggcgttcca
gggatgccaggtttaaagggcctcaaaggactacctggaccagcaggaccaccaggcccc
agaggagatttgggcagcactgggaatcctggagaaccaggactgcgtggtataccagga
atcatggggaacatgggcatgccaggttctaaaggaaaaaggggaactttgggattccca
ggtcgagcaggaagaccaggcctcccaggtattcatggtctccagggagataagggagag
ccaggttattcagaaggtacaaggccaggaccaccgggaccaacgggggatccaggactg
ccgggtgatatgggaaagaaaggagaaatggggcaacctggcccccctggacatttgggg
cctgctggacctgagggagcccctggaagtcctggaagtcctggcctcccaggaaagcca
ggtcctcatggtgatttgggttttaaaggaatcaaaggcctcctgggccctccaggaatc
agaggccctccaggtcttccaggatttccaggatctcctggaccaatgggtataagaggt
gaccaaggacgtgatggaattcctggtccagccggagaaaagggagaaacgggtttattg
agggcccctccaggcccaagagggaaccctggtgctcaaggagccaaaggagacagggga
gccccaggttttcctggcctcccgggcagaagaggggccatgggagaggctggacctcga
ggacccacaggcatagaaggattcccggggccaccaggtctgcccggtgcaattatccct
ggccagacaggaaatcgtggtccaccaggctcaagaggaagcccaggtgagcctggtccc
cctggacctccagggagtcacgtaataggcataaaaggagacaaagggtctatgggccac
cctggcctgaaaggtccacctggaactgcaggagacatgggaccaccaggtcgtctggga
gcaccaggtactccaggtcttccaggacccagaggtgatcctggattccaggggtttcca
ggcgtgaaaggagaaaagggtaatcctggatttctaggatccattggacctccaggacca
attgggccaaaaggactacctggtgtacgtggagaccctggcacacttaagattatctcc
cttccaggaagcccagggccacctggcacacctggagagccagggatgcagggagaacct
gggccaccagggccacctggaaacctaggaccctgtgggccaagaggtaagccaggcaag
gatggaaaaccaggaactcctggaccagctggagaaaaaggcaacaaaggttctaaagga
gagccaggaccagctggatcagatggattgcccggtttgaaaggaaaacgtggagacagt
ggatcacctgcaacctggacaacgagaggctttgtcttcacccgacacagtcaaaccaca
gcaattccttcatgtccagaggggacagtgccactctacagtgggttttcttttcttttt
gtacaaggaaatcaacaagcccacggacaagaccttggaactcttggcagctgcctgcag
cgatttaccacaatgccattcttattctgcaatgtcaatgatgtatgtaatttcgcatct
cgaaatgattattcatactggctgtcaacaccagctctgatgccaatgaacatggccccc
attactggcagagcccttgagccttatataagcagatgcactgtttgtgaaggtcctgcg
atcgccatagccgttcacagccaaaccactgacattcctccatgtcctcacggctggatt
tctctctggaaaggattttcattcatcatgttcacaagtgcaggttctgagggcaccggg
caagcactggcctcccctggctcctgcctggaagaattccgagccagcccatttctagaa
tgtcatggaagaggaacgtgcaactactattcaaattcctacagtttctggctggcttca
ttaaacccagaaagaatgttcagaaagcctattccatcaactgtgaaagctggggaatta
gaaaaaataataagtcgctgtcaggtgtgcatgaagaaaagacactga
DBGET
integrated database retrieval system
