KEGG   Pan troglodytes (chimpanzee): 460167
Entry
460167            CDS       T01005                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03013  Nucleocytoplasmic transport
ptr04141  Protein processing in endoplasmic reticulum
ptr04150  mTOR signaling pathway
ptr05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    460167 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    460167 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    460167 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    460167 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    460167 (SEC13)
   04131 Membrane trafficking [BR:ptr04131]
    460167 (SEC13)
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     460167 (SEC13)
Membrane trafficking [BR:ptr04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    460167 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    460167 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    460167 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 Beta-prop_RIG_2nd EIF3I Beta-prop_NOL10_N WD40_Gbeta Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st NBCH_WD40 PAC11
Other DBs
NCBI-GeneID: 460167
NCBI-ProteinID: NP_001267197
Ensembl: ENSPTRG00000014619
VGNC: 2558
UniProt: G2HEP5
LinkDB
Position
2:complement(14320931..14341621)
AA seq 325 aa
MGKMVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHE
GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYG
LILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPN
YIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD
GRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW
VCISDVNKGQGSVSASVTEGQQNEQ
NT seq 978 nt   +upstreamnt  +downstreamnt
atggggaaaatggtgtcagtaattaacactgtggatacctcccatgaggacatgattcac
gacgcccagatggactactatggcacccgcctggcaacctgctcatcagacaggtccgtc
aaaatctttgatgtgcgcaatggagggcagatccttatcgccgacctcaggggtcatgag
ggtcctgtgtggcaagtggcctgggctcaccccatgtacggcaacatcctggcatcgtgc
tcctatgaccggaaagtcattatctggagagaggaaaacggcacctgggagaagagccac
gagcatgcaggacacgactcctcagtgaactcggtgtgctgggccccccatgactacggc
ctgatcctggcctgtgggagctcggatggggccatctccctgctgacttacaccggggaa
ggccaatgggaagtaaagaagatcaacaacgctcacaccattggctgcaatgccgtcagc
tgggcccctgctgttgtacctggaagcctcatagaccagccatcggggcagaaacccaat
tacatcaagaggtttgcatcaggtggctgtgacaacctcatcaagctgtggaaggaggag
gaggacggccagtggaaggaggagcagaagctagaagcgcacagtgactgggttcgagat
gtggcctgggccccctccatcggcctgcccaccagcaccatcgccagctgctcccaggat
ggtcgtgtgttcatttggacctgtgatgatgcctcaagcaatacgtggtcccctaaattg
ttgcacaagttcaacgatgtggtgtggcatgtgagctggtccatcacagccaacatcctg
gctgtctctggtggagacaataaggtgaccctgtggaaggagtcagttgatgggcagtgg
gtgtgcatcagtgatgtcaacaagggccagggctccgtatcagcgtcagtgacagagggc
cagcagaatgagcagtga

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