| Entry |
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| Symbol |
SCN10A
|
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| Name |
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
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| KO |
| K04842 | voltage-gated sodium channel type X alpha |
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| Organism |
ptr Pan troglodytes (chimpanzee)
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| Brite |
KEGG Orthology (KO) [BR:ptr00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:ptr04040]
460274 (SCN10A)
Ion channels [BR:ptr04040]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
460274 (SCN10A)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(42699814..42796380)
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| AA seq |
1959 aa
MEFPIGSLETNNFRRFTPESLVEIEKQIAAKQGTKKAREKHREQKDQEEKPRPQLDLKAC
NQLPKFYGELPAELIGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITITILVNCVCMTRTDLPEKIEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVKKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNDMAVNETTNYSSHRKPDI
YINKRGTSDPLLCGNGSDSGHCPDGYICLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQDS
WERLYQQTLRASGKIYMIFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATTDEIEAKEKK
FQEALEMLRKEQEVLAALGIDTTSLHSHNGSPLTSKNASERRHRIKPRVSEGSTEDNKSP
RSDPYNQRRMSFLGLASGKRRASHGSVFHFRSPGRDISLPEGVTDDGVFPGDHESHRGSL
LLGGGAGQQGPLPRSPLPQPSNPDSRHGEDEHQLPPTSELAPGAVDVSAFDAGQKKTFLS
AEYLDEPFRAQRAMSVVSIITSVLEELEESEQKCPPCLTSLAQKYLIWDCCPMWVKLKTI
LFGLVTDPFAELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKII
AFDPYYYFQKKWNIFDCIIVTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTLI
KIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYRNNRKNISAPHEDWPRWHMHDFFH
SFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADN
LTAPEDDGEVNNLQVALARIQVFGHRTKQALCSFFSRPCPFPQPKAEPELVVKLPLSSSK
AENHVAANTARGSSGGLQAPRGPRDEHSDFIANPTVWVSVPIAEGESDLDDLEDDGGEDA
QSFQQEVIPKGQQEQLQQVERCGDHLTPRSPGTGTSSEDLAPSLGETWKDESVPQASAEG
VDDTSSSEGSTVDCPDPEEILRKIPELADDLEEPDDCFTEGCIRHCPCCKVDTTKSPWDV
GWQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALLEYTDRVFTFIF
VFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALRP
LRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINYTDGE
FSLVPLSIVNNKSDCKIQNSTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAV
DSREVNMQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPLNKFQGFVFDIVTRQAFDITIMVLICLNMITMMVET
DDQSEEKTKILGKINQFFVAVFTGECVMKLFALRQYYFTNGWNVFDFIVVVLSIASLIFS
AILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYSIFGMSSFPHVRWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPY
CDPNLPNSNGTRGDCGSPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLS
EDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNILIQMDLPLVPGDK
IHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKSSYEPIATTLRWKQEDISATV
IQKAYRSYVLHRSMALSNTPCVPRAEEEAASLPDEGFVAFTANENCVLPDKSETASATSF
PPSYESVTRGLSDRVNMRTSSSIQNEDEATSMELIAPGP |
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| NT seq |
5880 nt +upstreamnt +downstreamnt
atggaattccccattggatccctcgaaactaacaacttccgtcgctttactccggagtca
ctggtggagatagagaagcaaattgctgccaagcagggaacaaagaaagccagagagaag
catagggagcagaaggaccaagaagagaagcctcggccccagctagacttgaaagcctgc
aaccagctgcccaagttctatggtgagctcccagcagaactgatcggggagcccctggag
gatctagatccgttctacagcacacaccggacatttatggtgctgaacaaagggaggact
atttcccggtttagtgccactcgggccctgtggctattcagtcctttcaacctgatcaga
agaacggccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttattacg
atcactattttggttaattgtgtgtgcatgacccgaactgaccttccagagaaaattgaa
tatgtcttcactgtcatttacacctttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagttcacgtacctgagagatccttggaactggctggattttagcgtcatt
accctggcatatgttggcacagcaatagatctccgtgggatctcaggcctgcggacattc
agagttcttagagcattaaaaacagtttctgtgatcccaggcctgaaggtcattgtgggg
gccctgattcactcagtgaagaaactggctgatgtgaccatcctcaccatcttctgccta
agtgtttttgccttggtggggctgcaactcttcaagggcaacctcaaaaataaatgtgtc
aagaatgacatggctgtcaatgagacaaccaactactcatctcacagaaaaccagatatc
tacataaataagcgaggcacttctgaccccttactgtgtggcaatggatctgactcaggc
cactgccctgatggttatatctgccttaaaacttcggacaacccggattttaactacacc
agctttgattcctttgcttgggctttcctctcactgttccgcctcatgacacaggattcc
tgggaacgcctctaccagcagaccctgagggcttctgggaaaatctatatgatctttttt
gtgctcgtaatcttcctgggatctttctacctggtcaacttgatcttggctgtagtcacc
atggcatatgaggagcagaaccaggcaaccactgatgaaattgaagcaaaggagaagaag
ttccaggaggccctcgagatgctccggaaggagcaggaggtgctagcagcactagggatt
gacacaacctctctccactcccacaatggatcacctttaacctccaaaaatgccagtgag
agaaggcatagaataaagccaagagtgtcagagggctccacagaagacaacaaatcaccc
cgctctgatccttacaaccagcgcaggatgtcttttctaggcctcgcctctggaaaacgc
cgggctagtcatggcagtgtattccatttccggtcccctggccgagatatctcactccct
gagggagtcacagatgatggagtctttcctggagaccacgaaagccatcggggctctctg
ctgctgggtgggggtgctggccagcaaggccccctccctagaagccctcttcctcaaccc
agcaaccctgactccaggcatggagaagatgaacaccaactgccacccactagtgagctt
gcccctggagctgtcgatgtctcggcattcgatgcaggacaaaagaagactttcttgtca
gcagaatacttagatgaacctttccgggcccaaagggcaatgagtgttgtcagtatcata
acctccgtccttgaggaactcgaggagtctgaacagaagtgcccaccctgcttgaccagc
ttggctcagaagtatctgatctgggattgctgccccatgtgggtgaagctcaagacaatt
ctctttgggcttgtgacggatccctttgcagagctcaccatcaccttgtgcatcgtggtg
aacaccatcttcatggccatggagcaccatggcatgagccctaccttcgaagccatgctc
cagataggcaacattgtctttaccatattttttactgccgaaatggtcttcaaaatcatt
gccttcgacccatactattatttccagaagaagtggaatatctttgactgcatcatcgtc
actgtgagtctgctagagctgggcgtggccaagaagggaagcctgtctgtgctgcggagc
ttccgcttgctgcgcgtattcaagctggccaaatcctggcccaccttaaacacactcatc
aagatcatcggaaactcagtgggggcactggggaacctcaccatcatcctggccatcatt
gtctttgtctttgctctggttggcaagcagctcctaggggaaaactaccgtaacaaccga
aaaaatatctccgcgccccatgaagattggccccgctggcacatgcacgacttcttccac
tctttcctcattgtcttccgtatcctctgtggagagtggattgagaacatgtgggcctgc
atggaagtcggccaaaaatccatatgcctcatccttttcttgacggtgatggtgctaggg
aacctggtggtgcttaacctgttcatcgccctgctattgaactctttcagtgctgacaac
ctcacagccccggaggacgatggggaggtgaacaacctgcaggtggccctggcacggatc
caggtctttggccatcgtaccaagcaggctctttgcagcttcttcagcaggccctgccca
ttcccccagcccaaggcagagcctgagctggtggtgaaactcccactctccagctccaag
gctgagaaccacgttgctgccaacactgccagggggagctctggagggctccaagctccc
agaggccccagggatgagcacagtgacttcatcgctaatccgactgtgtgggtctctgtg
cccattgctgagggcgaatctgatcttgatgacttggaggatgatggtggggaagatgct
cagagcttccagcaggaagtgatccccaaaggacagcaggagcagctgcagcaagtcgag
aggtgtggggaccacctgacacccaggagcccaggcactggaacatcttctgaggacctg
gctccatccctgggtgagacgtggaaagatgagtctgttcctcaggcctctgccgaggga
gtggacgacacaagctcctctgagggcagcacagtggactgcccagatcctgaggagatc
ctgaggaagatccctgagctggcagatgacctggaagaaccagatgactgcttcacagaa
ggatgcattcgccactgtccttgctgcaaagtggataccaccaagagtccatgggatgtg
ggctggcaggtgcgcaagacttgctaccgtatcgtggagcacagctggtttgagagcttc
atcatcttcatgatcctgctcagcagtggatctctggcctttgaagactattacctggac
cagaagcccacggtgaaagctttgctggagtacactgacagggtcttcacctttatcttt
gtgtttgagatgctgcttaagtgggtggcctatggcttcaaaaagtacttcaccaatgcc
tggtgctggctggacttcctcattgtgaatatctcactgataagtctcacagcgaagatt
ctggaatattctgaagtggctcccatcaaagcccttcgaacccttcgcgctctgcggcca
ctgcgggctctttctcgatttgaaggcatgcgggtggtggtggatgccctggtgggcgcc
atcccatccatcatgaatgtcctcctcgtctgcctcatcttctggctcatcttcagcatc
atgggcgtgaacctcttcgcagggaagttttggaggtgcatcaactataccgatggagag
ttttcccttgtacctttgtcgattgtgaataacaagtctgactgcaagattcaaaactcc
accggcagcttcttctgggtcaatgtgaaagtcaactttgataatgttgcaatgggttac
cttgcacttctgcaggtggcaacctttaaaggctggatggacattatgtatgcagctgtt
gattcccgggaggttaacatgcaacccaagtgggaggacaacgtgtacatgtatttgtac
tttgtcatcttcatcatttttggaggcttcttcacactgaatctctttgttggggtcata
attgacaacttcaatcaacagaaaaaaaagttagggggccaggacatcttcatgacagag
gagcagaagaagtactacaatgccatgaagaagttgggctccaagaagccccagaagccc
atcccacggcccctgaacaagttccagggttttgtctttgacatcgtgaccagacaagct
tttgacatcaccatcatggtcctcatctgcctcaacatgatcaccatgatggtggagact
gatgaccaaagtgaagaaaagacgaaaattctgggcaaaatcaaccagttctttgtggcc
gtcttcacaggcgaatgtgtcatgaagctgttcgctttgaggcagtactacttcacaaat
ggctggaatgtgtttgacttcattgtggtggttctctccattgcgagcctgattttttct
gcaattcttaagtcacttcaaagttacttctccccgacgctcttcagagtcatccgcctg
gcccgaattggccgcatcctcagactgatccgagcggccaaggggatccgcacactgctc
tttgccctcatgatgtccctgcctgccctcttcaacatcgggctgttgctattccttgtc
atgttcatctactccatcttcggtatgtccagctttccccatgtgaggtgggaggctggc
atcgacgacatgttcaacttccagaccttcgccaacagcatgctgtgcctcttccagatc
accacgtcggccggctgggatggcctcctcagccccatcctcaacactgggcccccctac
tgtgaccccaatctgcccaacagcaatggcaccagaggggactgtgggagcccagccgta
ggcatcatcttcttcaccacctacatcatcatctccttcctcatcgtggtcaacatgtac
attgcagtgattctggagaacttcaatgtggccacggaggagagcaccgagcccctgagt
gaggacgactttgacatgttctatgagacctgggagaagtttgacccagaggccactcag
tttattaccttttctgctctctcggactttgcagacactctctctggtcccctgagaatc
ccaaaacccaatcgaaatatactgatccagatggacctgcctttggtccctggagataag
atccactgcttggacatcctttttgctttcaccaagaatgtcctaggagaatccggggag
ttggattctctgaaggcaaatatggaggagaagtttatggcaactaatctttcaaaatca
tcctatgaaccaatagcaaccactctccgatggaagcaagaagacatttcagccactgtc
attcaaaaggcctatcggagctatgtgctgcaccgctccatggcactctctaacacccca
tgtgtgcccagagctgaggaggaggctgcatcactcccagatgaaggttttgttgcattc
acagcaaatgaaaattgtgtactcccagacaaatctgaaactgcatctgccacatcattc
ccaccgtcctatgagagtgtcactagaggccttagtgatagagtcaacatgaggacatct
agctcaatacaaaatgaagatgaagccaccagtatggagctgattgcccctgggccctag |
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