KEGG   Pan troglodytes (chimpanzee): 460277
Entry
460277            CDS       T01005                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    460277 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptr03400]
    460277 (WDR48)
DNA repair and recombination proteins [BR:ptr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     460277 (WDR48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IP5PC_F WDR54 Beta-prop_DCAF4 WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 RAWUL Nucleoporin_N WD40_like Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 460277
NCBI-ProteinID: NP_001267448
Ensembl: ENSPTRG00000014765
VGNC: 2629
UniProt: G2HHJ8
LinkDB
Position
2:43057837..43105075
AA seq 677 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLG
TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVATTKSTVNKWALKGIHNFRASGDYDNDCTNPITPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHVN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSNNEKPGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggcccatcaccggcagaacacagcagggcggaggaaagtgcaggtttcctatgtt
attcgagatgaagtggagaagtacaaccgaaatggagtcaatgctctgcagctggatcca
gcactaaatagacttttcacagccggtcgagactctatcataagaatatggagtgtcaat
cagcacaagcaagatccatatatagcatctatggaacaccatactgattgggtaaacgac
attgtactctgttgtaatgggaaaacattaatatctgcttcttctgacacgacagtaaaa
gtatggaatgcacacaagggattttgcatgtcaacattaaggacacataaggattatgta
aaggccttagcatatgccaaggataaagaactagtagcatcagctgggttggacagacaa
atattcctttgggatgtgaatactctaacagcattgactgcctcaaataacactgtcaca
acttcttctttaagtggaaacaaagattccatttatagcctggccatgaatcaactggga
acaatcattgtatcagggtccactgaaaaggtgttaagggtatgggatccaagaacatgt
gcaaaactaatgaagcttaaagggcacacggataatgtgaaggcattgctattaaacaga
gatggcacgcaatgcctttcaggcagttctgatgggacaattcgcctttggtcccttggc
cagcagagatgtatagcaacataccgagtccatgatgaaggtgtttgggcgctgcaagtc
aatgatgccttcacacatgtgtattctggtggaagggacaggaagatttattgtacagac
ctaagaaaccctgacattcgggtgctaatttgtgaagaaaaagcaccagttctcaagatg
gagcttgatagatcagctgatcctcctcctgcaatttgggttgcaacaactaagtctaca
gtaaataaatggactttgaaaggaattcataattttagagcctctggagattatgacaat
gactgtacaaatcctataacacctctttgtacacaacctgaccaggttattaaagggggt
gctagtattattcagtgccacattcttaatgataagagacatatattaaccaaagatacc
aataataatgtggcatattgggatgtattgaaggcatgtaaagttgaagatctgggcaaa
gtggattttgaagatgaaattaagaaaagatttaaaatggtgtatgtgccaaattggttc
tcagtagacttaaaaacagggatgttaactattactttggatgaaagtgattgttttgct
gcctgggtttctgcaaaagatgctggtttcagcagccctgatgggtcagatccaaaattg
aatttaggaggacttttactccaagcactcctggaatattggcctagaacacatgtgaat
ccaatggatgaagaggaaaatgaagtaaaccatgtaaatggggagcaggagaaccgagtg
cagaagggaaatggatattttcaagtgcccccacatacacccgtgatctttggtgaagct
ggaggtcgcacactgttcaggctgctctgccgagattccgggggtgagactgagtctatg
cttcttaatgaaacagtgccacaatgggtaattgacatcactgtggataaaaatatgccc
aaattcaacaaaattcctttctacctccaacctcatgcatcttcaggagcaaaaacctta
aaaaaagatagactctctgctagtgacatgctccaagtccgaaaagttatggaacatgtt
tatgaaaaaattatcaacttggataatgagtctcaaaccactagctcttctaataatgaa
aaaccaggagaacaggaaaaagaagaagatattgctgtgttggcagaggagaaaattgaa
cttttgtgccaggaccaggttttggatccaaatatggaccttcgaacagtgaaacacttc
atatggaagagcggtggagacctcaccctccattaccgtcagaagtccacgtga

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