Pan troglodytes (chimpanzee): 460337
Help
Entry
460337 CDS
T01005
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03082
ATP-dependent chromatin remodeling
ptr04714
Thermogenesis
ptr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
460337 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
460337 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
460337 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptr03021
]
460337 (SMARCC1)
03036 Chromosome and associated proteins [BR:
ptr03036
]
460337 (SMARCC1)
Transcription machinery [BR:
ptr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
460337 (SMARCC1)
Chromosome and associated proteins [BR:
ptr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
460337 (SMARCC1)
PBAF complex
460337 (SMARCC1)
GBAF(ncBAF) complex
460337 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
460337
NCBI-ProteinID:
XP_001154676
Ensembl:
ENSPTRG00000014875
VGNC:
10473
UniProt:
H2QMI4
A0A6D2XHE6
LinkDB
All DBs
Position
2:complement(51598027..51793256)
Genome browser
AA seq
1105 aa
AA seq
DB search
MAAAAGGGGPGTAVGATGSGIAAAAAGLAVYRRKDGGPATKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKEKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKTSANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGG
KEDEDPAKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPVDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
MEADPDGQQPEKAENKVENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKE
LTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQ
QPPPPPPADGVPPPPAPGPPASAAP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcggcaggcggcggcgggccggggacagcggtaggcgccacgggctcgggg
attgcggcggcagccgcaggcctagctgtttatcgacggaaggatgggggcccggccacc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcatgcagatgctcctaccaataaaacactggctgggctg
gtggtgcagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaaactccctgcaaagtgtttcatggatttcaaagctggaggcaccttatgtcac
attcttggggctgcttacaagtataaaaatgaacagggatggcggaggtttgacctacag
aacccatctcgaatggatcgtaatgtggaaatgtttatgaacattgaaaaaacattggtg
cagaacaattgtttgaccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatatcatcaaacgacatcagggaacatttacggatgagaagtca
aaagcttcccaccacatttacccatattcttcctcacaagacgatgaagaatggttgaga
ccggtgatgagaaaagagaagcaagtgttagtgcattggggcttttacccagacagctat
gatacttgggtccatagtaatgatgttgatgctgaaattgaagatccaccaattccagaa
aaaccatggaaggttcatgtgaaatggattttggacactgatattttcaatgaatggatg
aatgaggaggattatgaggtggatgaaaataggaagcctgtgagttttcgtcagcggatt
tcaaccaagaatgaagagccagtcagaagtccagaaagaagagatagaaaaacatcagct
aatgctcgaaagaggaaacattcgccttcgcctccccctccgacaccaacagaatcacgg
aagaagagtgggaagaaaggccaagctagcctttatgggaagcgcagaagtcagaaagag
gaagatgagcaagaagatctaaccaaggatatggaagacccaacacctgtacccaatata
gaagaagtagtacttcccaaaaatgtgaacctaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtagcagatctagatgagcaggatgaagaaacagtcacagcaggagga
aaggaagatgaagatcctgccaaaggtgatcagagtcgatcagttgaccctggggaagat
aatgtgacagagcagaccaatcacattattattcctagttatgcatcatggtttgattat
aactgtattcatgtgattgaacggcgtgctcttcctgagttcttcaatggaaaaaacaaa
tccaagactccagaaatatacttggcatatcgaaattttatgattgacacgtatcgtcta
aacccccaagagtatttaactagcactgcttgtcggaggaacttgactggagatgtgtgt
gctgtgatgagggtccatgcctttttagagcagtggggactcgttaattaccaagttgac
ccggaaagtagacccatggcaatgggacctcctcctactcctcattttaatgtattagct
gataccccctctgggcttgtgcctctgcatcttcgatcacctcaggttcctgctgctcaa
cagatgctaaattttcctgagaaaaacaaggaaaaaccagttgatttgcagaactttggt
ctccgtactgacatttactccaagaaaacattagcaaagagtaaaggtgctagtgctgga
agagaatggactgaacaggagacccttctactcctggaggccctggagatgtacaaggat
gattggaacaaagtgtcggaacatgttggaagtcgtactcaggatgaatgcatcctccac
tttttgagacttcccattgaggacccataccttgagaattcagatgcttcccttgggcct
ttggcctaccagcctgtccccttcagtcagtcgggaaatccagttatgagtactgttgct
tttttggcatctgtggtggaccctcgcgtggcatctgccgcagcaaaagcggctttggag
gagttttctcgggttcgggaggaggtaccactggaattggttgaagctcatgtcaagaaa
gtacaagaagcagcacgagcctctgggaaagtggatcccacctacggtctggagagcagc
tgcattgcaggcacagggcctgatgagccagagaagcttgaaggagctgaagaggaaaaa
atggaagccgaccctgatggtcagcagcctgaaaaggcagaaaataaagtggaaaatgaa
acggatgaaggtgataaagcacaagatggagaaaatgaaaaaaatagtgaaaaggaacag
gatagtgaagtgagtgaggataccaaatcagaagaaaaggagactgaagagaacaaagaa
ctcactgatacatgtaaagaaagagaaagtgatactgggaagaagaaagtagaacatgaa
atttccgaaggaaatgttgccacagccgcagcagctgctcttgcctcagcggctaccaaa
gccaagcacctggctgcagtggaagaaagaaagatcaagtccctggtagctctcttggtt
gagacacaaatgaagaaactagagatcaaacttcgacattttgaagagctggaaactatc
atggacagagagaaagaagctctagaacaacagaggcagcagttgcttactgaacgccaa
aacttccacatggaacagctgaagtatgctgaattacgagcacgacagcaaatggaacag
cagcagcatggccagaaccctcaacaggcacaccagcactcaggaggacctggcctggcc
ccacttggagcagcagggcaccctggcatgatgcctcatcaacagccccctccctaccct
ctgatgcaccaccagatgccaccacctcatccaccccagccaggtcagataccaggccca
ggttccatgatgcccgggcagcacatgccaggccgcatgattcccactgttgcagccaac
atccacccctctgggagtggccctacccctcctggcatgccgccaatgccaggaaacatc
ttaggaccccgggtacccctgacagcacctaacggcatgtatccccctccaccacagcag
cagccaccgccaccgccacctgcagatggggtccctccgcctcctgctcctggcccgcca
gcctcagctgctccttag
DBGET
integrated database retrieval system
