Pan troglodytes (chimpanzee): 460709
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Entry
460709 CDS
T01005
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X3
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
460709 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptr03032
]
460709 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
ptr03400
]
460709 (TOPBP1)
DNA replication proteins [BR:
ptr03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
460709 (TOPBP1)
DNA repair and recombination proteins [BR:
ptr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
460709 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
460709
NCBI-ProteinID:
XP_009444781
Ensembl:
ENSPTRG00000015410
VGNC:
8849
LinkDB
All DBs
Position
2:complement(136847960..136909450)
Genome browser
AA seq
1517 aa
AA seq
DB search
MSRNDKEPFFVKFLKSSDNSKCFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGVVFDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTISCTSLEKEK
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKITRYTDINMEDFKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSIEKGFCQDESIYKTEPRPEAKTMPNSSTPT
SQINTIDNVSNISNINASCVSESICNSLNSKLEPTLENLENLDVSAFQAPEDLLDGCRIY
LCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPHVVGAK
WLLECFSKGYMLSEEPYIHANYQPVEIPVSHQPESKAALLKKKNSSFSKKDFAPSEKHEQ
ADEDLLSQYENDSSTVVEAKTSEARPFNDSTHAEPLNDSTHISLQEENQSSVSHCVPDVA
TITEEGLFSQKSFLVLGFSNENESNIANIIKENAGKIMSLLSRTVADYAVVPLLGCEVEA
TVGEVVTNTWLVTCIDYQTLFDPKSNPLFTPVPVMTGMTPLEDCVISFSQCAGAEKESLT
FLANLLGASVQEYFVRKSNAKKGMFASTHLILKERGGSKYEAAKKWNLPAVTIAWLLETA
RTGKRADESHFLIENSSKEERSLETEITNGINLNSDTAEHPGTRLQTHRKTVVTPLDMNR
FQSKAFRAVVSQHARQVAASPAVGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAA
LETPGRPSQQKRKLSTPLSEVIVKNLQLALANSSRNAVALSASPQLKEAQSEKEEAPKPL
HKVVVCVSKKLGKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKERG
VHIVSEHWLLDCAQECKHLPESLYPHTYNPKMSLDISAVQDGRLCNSRLLSAVSATKDDE
PDPLILEENDVDNMATNNKESAPSNGSGKNDSKGVLTQTLEMRENFQKQLQEIMSATSIV
KPQGQRTSLSRSGCNSASSTPDSTRSARSGRSRVLEALRQSRQTVPDVNTEPSQNEQIIW
DDPTAREERARLASNLQWPSCPTQYSELQVDIQNLEDSPFQKPLHDSEIAKQAVCDPGNI
RVTEAPKHPISEELETPIKDSHLIPTPQAPSIAFPLANPPVAPHPREKIIMIEETHEELK
KQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAG
KWVLHRSYLEACRTAGHFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKIQQRQ
ESGIVEGAFSGWKVILHVDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDLNKLK
PDDSGVNIAEAAAQNVYCLRTEYIADYLMQESPPHVENYCLPEAISFIQNNKELGTGLSQ
KRKAPTEKNKIKRPRVH
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgttttttgtgaagtttttaaagtcttcagacaattcc
aaatgtttttttaaagctctcgagtccataaaagaattccaatcagaagaatatcttcag
attattacagaagaagaggcattgaagataaaggagaatgatagatcactttatatctgt
gacccttttagtggcgttgtctttgatcacctcaaaaagcttggctgcagaattgttggt
cctcaagtagtcatattttgtatgcaccaccagcgatgtgtcccaagagccgaacatcca
gtttataatatggttatgtctgatgtaaccatatcttgtacaagtctggaaaaagaaaaa
agggaagaagttcataaatatgtacaaatgatgggcggacgagtatacagagaccttaat
gtatcagtaactcaccttattgcaggagaagttggtagcaaaaaatatttagttgctgca
aacctgaagaaacctattttgcttccctcttggataaaaacactttgggagaagtcacaa
gagaaaaaaataactagatatactgatataaacatggaagatttcaagtgtcctattttt
cttggttgcataatctgtgtgactggcttatgtggcttagacaggaaagaagttcagcaa
ctcacagttaagcatggaggtcaatacatgggacagttgaaaatgaatgaatgtacacac
ctcattgtgcaagaaccaaaaggtcagaagtatgagtgtgccaagagatggaatgtacac
tgtgtgaccacacagtggttttttgacagtattgagaaaggtttttgtcaggatgaatcc
atatacaagacagaacctagaccagaagcaaagactatgcccaattcttcaactcctacc
agccagatcaacacaattgataatgtcagcaatatttccaacataaatgcaagttgcgta
agtgaatcaatatgtaattcacttaacagcaaactggagcctacacttgaaaatctagaa
aatctggatgtcagtgcatttcaagcacctgaagatttattagatggttgtcggatatat
ctttgcggttttagtggcagaaagctagataaactgagaagacttattaacagtggaggt
ggagttcgttttaaccagctaaatgaagatgtaactcatgttattgtgggagattatgat
gatgaattgaagcagttttggaataaatcagcccacaggcctcatgtagtgggagcaaag
tggttgctagagtgtttcagtaaaggttatatgctttctgaagaaccatatatccatgct
aattaccagccagtggaaattccagtttcacatcagcctgaaagtaaagcagctctttta
aaaaagaagaacagcagcttctctaagaaagactttgctcctagtgaaaagcatgagcaa
gctgatgaagatctgctctctcaatatgaaaatgatagctccacagtagttgaggctaag
acgtctgaagccaggccctttaatgattctactcatgctgagcccttgaatgattctact
cacatttctttgcaagaagaaaaccagtcttctgtcagtcattgtgtccctgatgttgct
acaattactgaagaaggcttatttagccaaaagagtttccttgttttgggttttagtaat
gaaaatgaatctaacatcgcaaacatcataaaagaaaatgctgggaaaatcatgtccctt
ctgagcagaactgttgcggattatgctgtggttcctctgctggggtgtgaagtggaagcc
actgtgggagaagttgttacaaatacatggctggttacttgcatagactatcagactttg
tttgatccaaagtcgaatcctctcttcacaccagtcccagtaatgacaggaatgactcct
ttagaggattgtgttatttcatttagccagtgtgctggagcagaaaaagagtctttaaca
ttcctagcaaacctccttggagcaagtgttcaagaatactttgttcgcaaatccaatgca
aagaaaggcatgtttgccagtactcatcttatactgaaagaacgtggtggctctaaatat
gaagctgcaaagaagtggaatttacctgcagttactatagcttggctgttggagactgct
agaacgggaaagagagcagacgaaagccattttctgattgaaaattcatctaaagaagaa
cgaagtttggaaacagaaataacaaatggaatcaatctaaattcagatactgcagagcat
cctggcacacgcctgcaaactcacagaaaaaccgtcgttacacctttagatatgaaccgc
tttcagagtaaagctttccgtgctgtggtctcacaacatgccagacaggtcgcagcctcc
ccagcagtaggacaaccacttcagaaggagccctcgttacacctggatacaccatcaaaa
ttcctgtccaaggacaaactcttcaagccttcctttgatgtgaaggatgcacttgcagcc
ttggaaactccaggacgtcccagccaacagaaaaggaaactgagtacgccactctcagaa
gttattgtcaaaaacttgcaacttgctttggcaaatagctctcgaaatgctgtcgctctt
tctgccagccctcagctgaaagaggcccagtcagagaaggaagaagccccaaagccactt
cacaaagtagtggtatgtgttagtaaaaaactcggtaaaaagcagagtgaactaaatggg
atcgcagcctctctaggagcagattacaggtggagttttgatgaaacagtgactcatttc
atctatcaagggcggccaaatgacactaatcgggagtataaatctgtaaaagaaagagga
gtacacattgtttccgagcactggcttttagattgtgcccaagagtgtaaacatcttcct
gaatctctttatccgcatacttataatcccaaaatgagcttggatatcagtgcagtgcaa
gatggccgactctgtaatagtcgactactctcagctgtgtctgcaacaaaggatgatgag
ccagatcctttgattttagaagaaaatgatgtagacaatatggccaccaataataaagag
tcagcaccatcaaatggaagtggaaagaatgactctaaaggagttctgacacagacctta
gagatgagagagaactttcagaagcagttacaggagataatgtctgcaacatcaatagtg
aaaccccaagggcagaggacttccctttcaagaagtggttgtaacagcgcatcttcaacc
cctgacagcactcgctctgctcgcagtggacgaagtagagtcctagaggcactgaggcag
tctcgtcaaacagtacctgatgtcaacacagagccttcccaaaatgaacagattatttgg
gatgaccctacagcaagggaggagagagcaaggcttgccagcaatttgcagtggcctagt
tgtcccacacaatactctgagcttcaggttgacattcaaaacttggaggattctcctttt
caaaagcctttacatgattcagaaattgctaaacaggctgtctgtgatcctggaaacata
cgtgtgactgaagctcccaaacacccaatctctgaagaactggaaactcccataaaagat
agccacctgatccctacgcctcaagcccccagtattgcctttccactcgccaacccccct
gtggctccgcaccctagagaaaagattataatgatagaggagactcatgaagaattaaaa
aaacagtacatatttcagttatcatctctgaatcctcaagaacgtattgactattgtcat
ctgattgagaaactaggtggattggtgatagaaaagcagtgctttgatcccacctgtaca
cacattgttgtgggacatccacttcgaaacgagaagtatttagcctcagtggcagctggg
aagtgggtgcttcatcgctcctaccttgaagcctgcaggactgctggacacttcgtgcag
gaagaagactatgaatggggaagtagttccatacttgatgttttgactggaatcaatgta
cagcaacgaagactagcacttgcagcaatgagatggagaaaaaaaatccagcaaagacaa
gaatctggcattgttgagggagcatttagtgggtggaaggttattttacatgtggatcag
tctcgagaagcaggcttcaaacgccttcttcagtcaggaggagcaaaggtgctacctggt
cattctgtacctttatttaaagaggccacacatcttttttctgacttgaataaactgaaa
ccagatgactcaggagttaatatagcagaagctgctgcccagaacgtgtactgcttgaga
acagaatacattgctgattatctcatgcaggaatcacctcctcatgtagaaaattactgt
ctaccagaagctatttcatttattcagaataataaggaacttgggactggattatcacaa
aagaggaaagctcctacagaaaaaaataaaatcaaacgacctagagtacactaa
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integrated database retrieval system
