Pan troglodytes (chimpanzee): 461113
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Entry
461113 CDS
T01005
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptr04131
]
461113 (SH3TC1)
Membrane trafficking [BR:
ptr04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
461113 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_NPHP3
TPR_1
TPR_2
SH3_1
TPR_7
Csd3_N
TPR_19
Motif
Other DBs
NCBI-GeneID:
461113
NCBI-ProteinID:
XP_016806789
Ensembl:
ENSPTRG00000015901
VGNC:
684
LinkDB
All DBs
Position
3:8529441..8571648
Genome browser
AA seq
1573 aa
AA seq
DB search
MEEEQRSELRLAGLRQPVAGGLPQSQPGGGLGAPGLYYRAWGLGSGQAGQGLDLVQERAN
DQPAAVSVQPPWACLSVTGPQGQGGSRAGSRGRRPLCSQPGCGRPLPAPSSWRQPRGASQ
RWARSGHLVPACYGPVGLGAASEEHAAGEGALFREHGLSGVMAQQRGSDQLLRRGTRHPG
VLPRRGRGLQAENQREEAPWRKGAQQTRDREGRRSSGAGSHPPQHGARARHVRSLRVMEN
LPAVTTEEPAPMGRGPVGPSGGGSSRDQVRTVAMRPSVTWEKAGPKEAKAPVRGDEAPPA
RVAGPAAGTPPCQMGVYPTDLTLQLLAVRRKSGLRDPGLQQTLRGQLRLLENDSREMARV
LGELSARLLSIHSDQDRIVVTFKTFEEIWKFSTYHALGFTHHCLANLLMDQAFWLLSPSE
EEETAIQVHVDENALRLTHESLLIQEGPFFVLCPDHHVRVMTGPRDAGNGPQALRQASGA
PQGEAAPETDSSPPSPSVSSEEVAVAAAPEPLIPFHQWALRIPQDPIDDAMGGPVMPGNP
LMAVGLASALADFQGLGPEEMTFRGGDLIEILGAQVPSLPWCVGRHAASGQVGFVRSSLI
SMQGPVSELESAIFLNEEEKSFFSEGCFSEEDARQLLRRMSGTDVCSVYSLDSVEEAETE
QPQEKEIPPPCLSPEPQETLQKVKNVLEQCKTCPGCPQEPASWGLCAASSDVSLQDPEEP
SFCLEAEDDWEDPEALSSLLLFLNASGYKASFHGLYDVALPWLSSVFRSFSDEEELTGRL
AQARGAAKKAGLLMALARLCFLLGRLCSRRLKLSQARVYFEEALGALEGSFGDLFLVVAV
YANLASIYRKQKNREKCAQVVPKAMALLLGTPDHICSTEAEGEILQLALRRAVGGQSLQA
EARACFLLARHHVHLKQPEEALPFLERLLLLHRDSGAPEAAWLSDCYLLLADIYSRKCLP
HLVLSCVKVASLRTRGSLAGSLRSVNLVLQNTPQPHSLPAQTSHYLRQALASLTPGTGQA
LRGPLYTSLAQLYSHHGCHGPAITFMTQAVEASAVAGVHAIVDHLVALAWLHVLHGQSPV
ALDILQSVQDAVVASEDQEGVIANMVAVALKRTGRTRQAAESYYRALRAARDLGQQRNQA
VGLANFGALCLHAGASRLAQHYLLEAVRLFSRLPLGECGRDFTHVLLQLGHLCTRQGPAQ
QGKGYYEWALLVAVEMGHVESQLRAVQRLCHFYSAVMPSEAQCVIYHELQLSLACKVADK
VLEGQLLETISQLYLSLGTERAYKSALDYTKRSLGIFIDLQKKEKEAHAWLQAGKIYYIL
RQSELVDLYIQVAQNVALYTGDPNLGLELFEAAGDIFFDGAWEREKAVSFYRDRALPLAV
TTGNRKAELRLCNKLVALLATLEEPQEGLEFAHMALALSITLGDRLNERVAYHRLAALQH
RLGHGELAEHFYLKALSLCNSPLEFDEETLYYVKVYLVLGDIIFYDLKDPFDAAGYYQLA
LAAAVDLGNKKAQLKIYTRLATIYHNFLLDREKSLFFYQKARTFATELNVRRVNLPPLPL
CGWAPWLAPSHPR
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaacagagatcagagctgaggctggcagggctgaggcagccggtggctggt
ggacttccccaatcccagcctggcgggggactgggtgcccctggcctctactacagagcc
tgggggctgggcagcgggcaggcaggacagggcctggacctcgtccaggaaagagctaat
gatcaaccggctgcggtgtctgtgcagccgccctgggcctgcctctccgtcaccggccct
caggggcagggaggaagtagggcaggaagcagggggcggaggccgctgtgcagtcagcct
ggctgtgggcggcccctgcctgctccgtccagctggagacagccccgtggggccagccag
cgctgggccaggagcggccacctggttcctgcgtgctacggccctgtgggcctgggagct
gcctctgaggaacacgccgcaggcgaaggagcactgttccgggagcacggtctgtctggt
gtgatggcccagcaaagaggcagtgaccagctcctgaggaggggcacaaggcacccaggg
gttctgcctcgacggggaaggggactccaggcagaaaaccagcgagaggaggccccgtgg
aggaagggagcacagcaaacccgagatagggaggggaggcgcagcagcggtgcgggatca
cacccaccacaacacggtgcacgggccaggcatgtgaggtctctgcgggtcatggagaac
ctccctgccgtgaccactgaggagccggcccccatggggaggggtcctgtgggaccctca
ggaggtggcagcagccgggaccaggtccggactgtggccatgaggccctctgtgacctgg
gagaaagcggggcccaaggaggccaaggcaccagtgagaggcgacgaggctcctcctgcc
cgcgtggctgggcctgctgctgggacccctccctgccagatgggggtttatcccacagac
ctgaccctgcagctgctggctgtgcggaggaagagcggactgcgggaccccggcctacag
cagaccctccggggccagctccgcctgctggagaatgatagccgggagatggcccgcgtg
cttggggaattatcagccaggctgctgtccatccacagtgaccaggaccggatcgtggtg
acgtttaagacttttgaagaaatctggaagttttccacctaccacgctctcggcttcact
catcactgcctggcaaacctgctcatggaccaggccttctggctgctctcgcccagtgag
gaggaggagacggccatccaagtccatgtggatgagaacgccttgaggctgacccacgag
agcctcctcatccaagaagggcccttctttgtcctgtgtcctgaccaccatgtgagagtg
atgacgggtccccgggatgcaggaaatggcccccaggccctcaggcaggcttcgggggca
ccccagggagaggcggccccggaaacagactcttcaccgccgagccccagcgtgtcctcc
gaggaggtggcagtggcggccgccccggagcctttgattccatttcatcagtgggctctt
aggatcccccaggaccccatcgacgatgccatgggtggccctgtgatgcccggcaacccg
ttgatggctgtgggcctggcctcggcattggcagacttccagggcttggggcccgaagag
atgaccttccgaggtggcgacctcatcgagatccttggggcgcaggtgcccagcctgccc
tggtgcgtgggccgacacgcagcctcgggccaggtggggtttgtgcggagcagcctcatc
agcatgcagggccccgtgtccgagttggaaagtgcaatttttctcaatgaggaagaaaaa
tcattcttcagcgagggctgcttttctgaggaggatgccaggcagttgctgaggcggatg
tcgggcaccgacgtctgcagcgtgtacagcctggactcagtagaggaagctgagactgag
cagccgcaggaaaaagaaatacctccaccttgcctgagcccggagccacaggagaccttg
cagaaggtgaagaatgttctggaacaatgcaagacctgcccaggctgcccccaggagcca
gcgtcctggggtctctgtgcggcatccagtgacgtgagcttgcaggaccccgaggagccc
tccttctgcttggaagctgaggacgactgggaggacccagaggccctgagctcactgctg
ctgttcctgaacgcctccgggtacaaggccagcttccatggcctgtacgatgtggcgctg
ccatggctgagcagcgtgttccgcagcttcagcgacgaggaggagctgactgggcgcctg
gcacaggcccggggggcggccaagaaagctggcctcctcatggccctggccaggctctgc
ttcctcctggggcggctgtgcagcaggaggctcaagctgtcccaggcccgggtgtacttt
gaggaagcgctgggggccctggagggcagcttcggggacctgttcctggtggtggctgtg
tacgccaacctggccagcatttaccggaagcagaagaaccgggagaagtgtgcacaggtg
gtgcccaaagccatggccctgctcctggggacgcccgaccacatctgcagcaccgaggcg
gagggggagatcctgcagctggcgctgcggcgggcggtgggtggccagagcctgcaggcc
gaggcccgggcctgcttcctgctggccaggcaccacgtgcacctcaagcagcccgaggag
gccctgcccttcctagagcggctgctgcttttgcacagggactcgggagccccagaggct
gcgtggctctcagactgctacctactcctggctgacatctacagccgcaagtgcctgccc
cacctggtgctgagctgtgtcaaggtggcctcattgcggacacggggctcgctggccggc
tcgctgaggagtgtgaacctggtgctccagaacaccccccagccccacagcctccctgcc
cagacttcccactacctcaggcaagcgctggcatccctgaccccgggcacgggccaggcg
ctgcgcggccccctctacaccagcttggcccagctgtacagccaccatggctgccacggc
ccggccatcacctttatgacgcaggcagtggaagccagtgctgttgccggagtccatgcc
atcgtggaccacctggtggccctggcctggctgcacgtgcttcatgggcagagcccggtg
gccctggacatcctgcagtctgtccaggatgcggtggtggccagcgaggaccaggagggc
gtgattgccaacatggtggccgtggctctgaagaggacgggccggacaaggcaggcagcc
gagagctactaccgcgcccttcgggcggctcgggacctgggccagcagaggaaccaggca
gtggggctggccaacttcggggccctgtgcctgcacgcgggtgccagcaggctggcccag
cactacctcctggaggccgtgcggctgttctcgaggctgcccctcggggagtgtggccgg
gacttcacccacgtgctcctgcagctgggccacctctgcacccgccagggcccggcccag
cagggcaagggctactacgagtgggcccttctggtcgccgtggagatgggccacgtggag
agccagctgcgggccgtccagcggctgtgccacttctacagcgccgtcatgcccagcgag
gcccagtgtgtcatctaccatgagctccagctctccctggcctgcaaggtggccgacaag
gtgctggaggggcagctcctggagaccatcagtcagctctacctgtccctgggcaccgag
agggcctacaaatccgcactggactacaccaaacgaagtctggggattttcattgacctc
cagaagaaagagaaggaggcgcatgcctggctgcaagcagggaagatctattacatcttg
cggcagagcgagctggtggacctctacatccaggtggcacagaatgtggccctgtacaca
ggcgaccccaacctggggctggaactgtttgaggcggctggagacatcttcttcgacggg
gcctgggagcgggagaaagctgtgtccttctaccgggaccgggccctgcccctggcagtg
actacgggcaaccgcaaggcggagctgcggctgtgcaacaagctggtggcactgctggcc
acgctggaggagccccaggagggcttggagtttgcccacatggccctagcactcagcatc
accctgggggaccggctgaacgagcgcgtggcctaccaccggctggccgccctgcaacac
cgactgggccatggcgagctggcagagcacttctacctcaaggccctgtcgctctgcaac
tcgccgctggagtttgatgaggagaccctctactacgtgaaggtgtacctggtgctcggt
gacatcatcttctatgacctgaaggacccgtttgatgcagccgggtactaccagctggcg
ctggcggccgccgtggacctgggcaacaagaaggcacagctgaagatctacacgcggctg
gccaccatctaccacaacttcctcctggaccgtgagaagtcgctcttcttctaccagaag
gccaggaccttcgccacagagctcaacgtccgcagggtcaacctgcctcctctgccactc
tgcgggtgggccccctggttggcccccagccaccctcgctga
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