Pan troglodytes (chimpanzee): 461240
Help
Entry
461240 CDS
T01005
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03013
Nucleocytoplasmic transport
ptr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
461240 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
461240 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
461240 (NUP54)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
461240 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
461240
NCBI-ProteinID:
XP_024211868
Ensembl:
ENSPTRG00000016185
VGNC:
747
LinkDB
All DBs
Position
3:53978888..54012962
Genome browser
AA seq
562 aa
AA seq
DB search
MAFNFGAPSGTSGTAAATAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLASAGGFGGFGTTSTTAGSAFSFSAPTNTGTTGLFGGTQNKGFGFGTG
FGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPSNK
DEDGLVVLVFNKKETEIRSQQQQLVESLHKVLGGNQTLTVNVEGTKTLPDDQTEVVIYVV
ERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVD
PIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTSVAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQGELNAPT
QFKGRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLVEHGLNETIHIRGGVFS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaattttggggctccctctggcacctccggtaccgctgcagccaccgcggcc
cccgcgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaactgctaatcctgcagtgaactttaatattgggaatttcggtgtttct
actacctcggcgactccgttcaattttggtaacagtctggcaagtgcaggtgggtttgga
ggatttgggacaacatctacaactgcaggttctgcgttcagcttttctgccccaactaac
acaggcactactggactctttggtggtactcagaacaaaggttttggatttggtactggt
tttggcacaacaacgggaactagtactggtttaggtactggtttgggaactggactggga
tttggaggatttaatacacaacagcagcagcagcaaactacattaggtggtctcttcagt
cagcctacacaagctcctacccagtccaaccagctgataaatactgcgagtgctctttct
gctccaacgctgttgggagatgagagagatgctattttggcaaaatggaatcaactgcag
gccttttggggaacaggaaaagggtatttcaacaataatattccgccagtggaattcaca
caagaaaatcccttttgccgatttaaggcagtaggttatagttgcatgcccagtaataaa
gatgaagatgggctagtggttttagttttcaacaaaaaagaaacagagattcgaagccaa
caacaacagttggtagaatcattgcataaagttttgggaggaaaccagacccttactgta
aatgtagagggcactaaaacattgccagatgatcagacagaagttgttatttatgttgtt
gagcgttcgccaaatggtacttcaagaagagttccagctacaacgctatatgcccatttt
gaacaagccaatataaaaacacaattgcagcaacttggtgtaaccctttctatgactaga
acagaactttctcctgcacagatcaaacagcttttacagaatcctcctgctggtgttgat
cctattatctgggaacaggccaaggtagataaccctgattctgaaaagttaattcctgta
ccaatggtgggttttaaggaacttctccgaagactgaaggttcaagatcagatgactaag
cagcatcaaaccagattagatatcatatctgaagatattagtgagctacaaaagaatcaa
actacatctgtagccaaaattgcacaatacaagaggaaactcatggatctttcccataga
actttacaggtcctaatcaaacaggaaattcaaaggaagagtggttatgccattcaggct
gatgaagagcagttgcgagttcagctggatacgattcagggtgaactaaatgcacctact
cagttcaagggccgactaaatgaattgatgtctcaaatcaggatgcagaatcattttgga
gcagtcagatctgaagaaaggtattacatagatgcagatctgttacgagaaatcaagcag
catttgaaacaacaacaggaaggccttagccatttgattagcatcattaaagatgatcta
gaagatataaagctggtcgaacatggattgaatgaaaccatccacatcagaggtggtgtc
tttagttga
DBGET
integrated database retrieval system