KEGG   Pan troglodytes (chimpanzee): 461240
Entry
461240            CDS       T01005                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03013  Nucleocytoplasmic transport
ptr05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    461240 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    461240 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    461240 (NUP54)
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     461240 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 461240
NCBI-ProteinID: XP_024211868
Ensembl: ENSPTRG00000016185
VGNC: 747
LinkDB
Position
3:53978888..54012962
AA seq 562 aa
MAFNFGAPSGTSGTAAATAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLASAGGFGGFGTTSTTAGSAFSFSAPTNTGTTGLFGGTQNKGFGFGTG
FGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPSNK
DEDGLVVLVFNKKETEIRSQQQQLVESLHKVLGGNQTLTVNVEGTKTLPDDQTEVVIYVV
ERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVD
PIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTSVAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQGELNAPT
QFKGRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLVEHGLNETIHIRGGVFS
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggccttcaattttggggctccctctggcacctccggtaccgctgcagccaccgcggcc
cccgcgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaactgctaatcctgcagtgaactttaatattgggaatttcggtgtttct
actacctcggcgactccgttcaattttggtaacagtctggcaagtgcaggtgggtttgga
ggatttgggacaacatctacaactgcaggttctgcgttcagcttttctgccccaactaac
acaggcactactggactctttggtggtactcagaacaaaggttttggatttggtactggt
tttggcacaacaacgggaactagtactggtttaggtactggtttgggaactggactggga
tttggaggatttaatacacaacagcagcagcagcaaactacattaggtggtctcttcagt
cagcctacacaagctcctacccagtccaaccagctgataaatactgcgagtgctctttct
gctccaacgctgttgggagatgagagagatgctattttggcaaaatggaatcaactgcag
gccttttggggaacaggaaaagggtatttcaacaataatattccgccagtggaattcaca
caagaaaatcccttttgccgatttaaggcagtaggttatagttgcatgcccagtaataaa
gatgaagatgggctagtggttttagttttcaacaaaaaagaaacagagattcgaagccaa
caacaacagttggtagaatcattgcataaagttttgggaggaaaccagacccttactgta
aatgtagagggcactaaaacattgccagatgatcagacagaagttgttatttatgttgtt
gagcgttcgccaaatggtacttcaagaagagttccagctacaacgctatatgcccatttt
gaacaagccaatataaaaacacaattgcagcaacttggtgtaaccctttctatgactaga
acagaactttctcctgcacagatcaaacagcttttacagaatcctcctgctggtgttgat
cctattatctgggaacaggccaaggtagataaccctgattctgaaaagttaattcctgta
ccaatggtgggttttaaggaacttctccgaagactgaaggttcaagatcagatgactaag
cagcatcaaaccagattagatatcatatctgaagatattagtgagctacaaaagaatcaa
actacatctgtagccaaaattgcacaatacaagaggaaactcatggatctttcccataga
actttacaggtcctaatcaaacaggaaattcaaaggaagagtggttatgccattcaggct
gatgaagagcagttgcgagttcagctggatacgattcagggtgaactaaatgcacctact
cagttcaagggccgactaaatgaattgatgtctcaaatcaggatgcagaatcattttgga
gcagtcagatctgaagaaaggtattacatagatgcagatctgttacgagaaatcaagcag
catttgaaacaacaacaggaaggccttagccatttgattagcatcattaaagatgatcta
gaagatataaagctggtcgaacatggattgaatgaaaccatccacatcagaggtggtgtc
tttagttga

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