KEGG   Pan troglodytes (chimpanzee): 461362
Entry
461362            CDS       T01005                                 
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X5
  KO
K15184  AF4/FMR2 family member 1
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    461362 (AFF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptr03021]
    461362 (AFF1)
Transcription machinery [BR:ptr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     461362 (AFF1)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int BRD4_CDT
Other DBs
NCBI-GeneID: 461362
NCBI-ProteinID: XP_009446273
Ensembl: ENSPTRG00000016255
VGNC: 2949
UniProt: K7CZD8
LinkDB
Position
3:88273291..88520423
AA seq 1211 aa
MAAQSSLYNDDRNLLRIREKERRNQEAHQEKEAFPEKIPLFGEPYKTAKGDELSSRIQNM
LGNYEEVKEFLSTKSHTHRLDASENRLGKPKYPLIPDKGSSIPSSSFHTSVHHQSIHTPA
SGPLSVGNISHNPKMAQPRTEPMPSLHAKSCGPPDSQHLTQDRLGQEGFGSSHHKKGDRR
ADGDHCASVTDSAPGRELSPLISSLPSPVPPLSPIHSNQQTLPRMQGSSKVHGSSNNSKG
YCPAKSPKDLAVKVHDKETPQDSLVAPAQPPSQTFPPPSLPSKSVAVQQKPTAYVRPMDG
QDQAPSESPELKPLPEDYRQQTFEKTDLKVPAKAKLTKLKMPSQSVEQTYSNEVHCVEEI
LKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKDSQHVSSVTENQKQYDTSSKTHSNSQQGT
SSMLEDDLQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDS
SSDSESESSSSDSEENEPLETPAPEPEPPTTNKWQLDNWLTKVSQPAAPPEGPGSTEPPR
RHPESKGSSDSATSQEHSESKDPPPKSSSKAPRALPEAPHPGKRSCQKSPAQQEPPQRQT
VGTKQPKKPAKASARAGSRTSLQGEREPGLLPYGSRDQTSKDKPKVKTKGRPRAAASNEP
KPAVPPSSEKKKHKSSLPAPSKALSGPEPAKDNVEDRSPEHFALVPLTESQGPPHSGSGS
RTSGCRQAVVVQEDSRKDRLPLPLRDTKLLSPLRDTPPPQSLMVKITLDLLSRIPQPPGK
GSRQRKAEDKQLPAGKKHSSEKRSSDSSSKLAKKRKGEAERDCDNKKIRLEKEIKSQSSS
SSSHKESSKTKPSRPSSQSSKKEMLPPPPVSSSSQKPAKPALKRSRREADTCGQDPPKSA
SSTKSNHKDSSTPKQRRVEGKGSRSSSEHKGSSGDTANPFPVPSLPNGNSKPGKPQVKFD
KQQADLHMREAKKMKQKAELMTDKVGKAFKYLEAVLSFIECGIATESESQASKSAYSVYS
ETVDLIKFIMSLKSFSDATAPTQEKIFAVLCMRCQSILNMAMFRCKKDIAIKYSRTLNKH
FESSSKVAQAPSPCIARSTGTPSPLSPMPSPASSVGSQSSAGSVGSSGVAATISTPVTIQ
NMTSSYVTITSHVLTAFDLWEQAEALTRKNKEFFARLSTNVCTLALNSSLVDLVHYTRQG
FQQLQELTKTP
NT seq 3636 nt   +upstreamnt  +downstreamnt
atggcagcccagtcaagtttgtacaatgacgacagaaacctgcttcgaattagagagaag
gaaagacgcaaccaggaagcccaccaagagaaagaggcatttcctgaaaagattcccctt
tttggagagccctacaagacagcaaaaggtgatgagctgtctagtcgaatacagaacatg
ttgggaaactacgaagaagtgaaggagttccttagtactaagtctcacactcatcgcttg
gatgcttctgaaaataggttgggaaagccgaaatatcctttaattcctgacaaagggagc
agcattccatccagctccttccacactagtgtccaccaccagtccattcacactcctgcg
tctggaccactttctgttggcaacattagccacaatccaaagatggcgcagccaagaact
gaaccaatgccaagtctccatgccaaaagctgcggcccaccggacagccagcacctgacc
caggatcgccttggtcaggaggggtttggctctagtcatcacaagaaaggtgaccgaaga
gctgacggagaccactgtgcttcggtgacagattcggctccagggagggagctttctccc
ttaatctcctctttgccttccccagttccccctttgtcacctatacattccaaccagcaa
actcttccccggatgcaaggaagcagcaaggttcatggcagcagcaataacagtaaaggc
tattgcccagccaaatctcccaaggacctagcagtgaaagtccatgataaagagacccct
caagacagtttggtggcccctgcccagccgccttctcagacatttccacctccctccctc
ccctcaaaaagtgttgcagtgcagcagaagcccacggcttatgtccggcccatggatggt
caagatcaggcccctagtgaatcccctgaactgaaaccactgccggaggactatcgacag
cagacctttgaaaaaacagacttgaaagtgcctgccaaagccaagctcaccaaactgaag
atgccttctcagtcagttgagcagacctactccaatgaagtccattgtgttgaagagatt
ctgaaggaaatgacccattcatggccacctcctttgacagcaatacatacgcctagtaca
gctgagccatccaagtttcctttccctacaaaggactctcagcatgtcagttctgtaacc
gaaaaccaaaaacaatatgatacatcttcaaaaactcactcaaattctcagcaaggaacg
tcatccatgctcgaagacgaccttcagctcagtgacagtgaggacagtgacagtgaacaa
accccagagaagcctccctcctcatctgcacctccaagtgctccacagtcccttccagaa
ccagtggcatcagcacattccagcagtgcagagtcagaaagcaccagtgactcagacagt
tcctcagactcggagagcgagagcagttcaagtgacagcgaagaaaatgagcccctagaa
accccggctccggagcctgagcctccaacaacaaacaaatggcagctggacaactggctg
accaaagtcagccagccagctgcgccaccggagggccccgggagcacagagcccccacgg
cggcacccagagagtaagggcagcagcgacagtgccacgagtcaggagcattctgaatcc
aaagatcctccccctaaaagctccagcaaagccccccgggccctacccgaagccccccac
cccggaaagaggagctgtcagaagtctccggcacagcaggagcccccacaaaggcaaacc
gttggaaccaaacaacccaaaaaacctgccaaggcctctgcccgggcaggttcacggacc
agcctgcagggggaaagggagccagggcttcttccctatggctcccgagaccagacttcc
aaagacaagcccaaggtgaagacgaaaggacggccccgggccgcagcaagcaatgagccc
aagccagcagtgcccccctccagtgagaagaagaagcacaagagctccctccctgccccc
tctaaggctctctcaggcccagaacccgcgaaggacaatgtggaggacaggagccctgag
cactttgctcttgttcccctgactgagagccagggcccaccccacagtggcagtggcagc
aggactagtggctgccgccaagccgtggtggtccaggaggacagccgcaaagacagactc
ccattgcctttgagagacaccaagctgctctcaccgctcagggacactcctcccccacaa
agcttgatggtgaagatcaccctagacctgctctctcggataccccagcctcccgggaag
gggagccgccagaggaaagcagaagataaacagctgcccgcagggaagaagcacagctct
gagaagaggagctcagacagctcaagcaagttggccaaaaagagaaagggtgaagcagaa
agagactgtgataacaagaaaatcagactggagaaggaaatcaaatcacagtcgtcttct
tcatcctcccacaaagaatcttctaaaacaaagccctccaggccctcctcacagtcctca
aagaaggaaatgctccccccgccacccgtgtcctcgtcctcccagaagccagccaagcct
gcacttaagaggtcaaggcgggaagcagacacctgtggccaggaccctcccaaaagtgcc
agcagtaccaagagcaaccacaaagactcttccactcccaagcagagaagagtagagggg
aagggctccagaagctcctcggagcacaagggttcttccggagatactgcaaatcctttt
ccagtgccttctttgccaaatggtaactctaaaccagggaagcctcaagtgaagtttgac
aaacaacaagcagaccttcacatgagggaggcaaaaaagatgaagcagaaagcagagtta
atgacggacaaggttggaaaggcttttaagtacctggaagccgtcttgtccttcattgag
tgtggaattgccacagagtctgaaagccaggcatccaagtcagcttactctgtctactca
gaaactgtagatctcattaaattcataatgtcattaaaatccttctcagatgccacagcg
ccaacacaagagaaaatatttgctgttttatgcatgcgttgccagtccattttgaacatg
gcgatgtttcgttgtaaaaaagacatagcaataaagtattctcgtactcttaataaacac
ttcgagagttcttccaaagtcgcccaggcaccttctccatgcattgcaagaagcacaggc
acaccatcccctctttccccaatgccttctcctgccagctccgtagggtcccagtcaagt
gctggcagtgtggggagcagtggggtggctgccactatcagcaccccagtcaccatccag
aatatgacatcttcctatgtcaccatcacatcccatgttcttactgcctttgacctttgg
gaacaggccgaggccctcacaaggaagaataaagaattctttgctcggctcagcacaaat
gtgtgcaccttggccctcaacagcagtttggtggacctggtgcactatacacgacagggt
tttcagcagctacaagaattaaccaaaacaccttaa

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