Pan troglodytes (chimpanzee): 461766
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Entry
461766 CDS
T01005
Symbol
VCAN
Name
(RefSeq) versican core protein isoform X2
KO
K06793
versican core protein
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04514
Cell adhesion molecules
ptr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
461766 (VCAN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
461766 (VCAN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ptr00535
]
461766 (VCAN)
00536 Glycosaminoglycan binding proteins [BR:
ptr00536
]
461766 (VCAN)
04091 Lectins [BR:
ptr04091
]
461766 (VCAN)
Proteoglycans [BR:
ptr00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
461766 (VCAN)
Glycosaminoglycan binding proteins [BR:
ptr00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
461766 (VCAN)
Lectins [BR:
ptr04091
]
C-Type lectins
Lecticans
461766 (VCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
hEGF
EGF_TEN
Sushi
EGF_3
EGF_2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
461766
NCBI-ProteinID:
XP_001147684
Ensembl:
ENSPTRG00000017055
VGNC:
4221
UniProt:
A0A2I3TP34
LinkDB
All DBs
Position
4:complement(32470852..32582058)
Genome browser
AA seq
2409 aa
AA seq
DB search
MFINIKSILWMCSTLIVTHALHKVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSE
FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKL
LASDAGLYRCDVMYGIEDTQDTVSLTVDGVVFHYRAATSRYTLNFEAAQKACLDVGAVIA
TPEQLFAAYEDGFEQCDAGWLSDQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYD
VYCYVDHLDGDVFHLTVPSKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLS
DASVRHPVTVARAQCGGGLLGVRTLYRFENQTGFPPPDSRFDAYCFKRRMSDLSVIGHPI
DSESKEDEPCSEETDPVHDLMAEILPEFPDIIEIDLYHSEENEEEEEECANATDVTTTPS
VQYINGKHLVTTVPKDPEAAEARRGQFESVAPSQNFSDSSESDTHPFVIAKTELSTAVQP
NESTETTESLEITWKPETYPETSEHFSGGEPDVFPTVPFHEEFESGTAKKGAESVTERDT
EVGHQGREHTEPVSLFPEESSGEIAIDQESQKIAFARATEVTFGEEVEKSTSVTYTPTIV
PSSASAYVSEEEAVTLIGNPWPDDLLSTKESWVEATPRQVVELSGSSSIPITEGSGEAEE
DEDTMFTMVTDLSQRNTTDTLITLDTSRIITESFFEVPATTIYPVSEQTSAKVVPTKFVS
ETDTSEWISSTSVEEKKRKEEEGTTGTASTVEVYSSTQRSDQLILPFELESPNVATSSDS
GTRKSFMSLTTPTQSEREMTDSTPVFTETNTLENLGAQTTEHSSVHHPGVQEGLTTLPRS
PASVFMEQGSGEAAADPETTTVSSFSLNLEYEIQAEKEAAGTLSPHVETTFSTEPTGLVL
STVMDREVAENITQTSREIVISERLEEPNYGAEIRGFSTGFPLEEDFSGDFREYSTVSHP
IAKEETVMTEGSGDAAFRDTQTSPSTVPTSVHISHISDSEGPSSTMVSTSAFPWEEFTSS
AEGSGEQLVTVSSSVVPVLPSAVRKFSGTASSIIDEGLGEVGTVNEIDRRSTILPTAEVE
GTKAPVEKEEVKVSGTVSTNFPQTIEPAKLWSRQEVNPVRQEIESETTSEEQIQEEKSFE
SPQNSPATEQTIFDSQTFTETELKTTDYSVLTTKKTYSDDKEMKEEDTSLVNMSTPDPDA
NGLESYTTLPEATEKSHFFLATALVTESIPAEHVVTDSPIKKEESTKHFPKGMRPTIQES
DTELLFSGLGSGEEVLPTLPTESVNFTEVEQINNTLYPHTSQVESTSSDKIEDSNRMENV
AKEVGPLVSQTDIFEGSGSVTSTTLIEILSDTGAEGPTVAPLPFSTDIGHPQNQTLRWAE
EIQTSRPQTITEQDSNKNSSTAEINETTASSTDFLARAYGFEMAKEFVTSAPKPSDLYYE
PSGEGSGEVDIVDSFHTSATTQATRQESSTTFVSDGSLERHPEVPSAKAVTADGFPTVSV
MLPLHSEQNKSSPDPTSTLSNTVSYERSTDGSFRDRFREFEDSTLKPNRKKPTENIIIDL
DKEDKDLILTITESTILEILPELTSDKNTIIDIDHTKPVYEDILGMQTDIDTEVPSEPHD
SNDESNDDSTQVQEIYEAAVNLSLTEETFEGSADVLASYTQATHDESMTYEDRSQLDHMG
FNFTTGIPAPSTETELDVLLPTATSLPIPHKSATVIPEIEGIKAEAKALDDMFESSTLSD
GQAIADQSEIIPTLGQFERTQEEYEDKKHAGPSFQPEFSSGAEEALVDHTPYLSIATTHL
MDQSLTEVPDVMEGSNPPYYTDTTLAVSTFAKLSSQTPSSPLTIYSGSEASGHTEIPQPS
ALPGIDVGSSVMSPQDSFKEIHVNIEATFKPSSEEYLHITEPPSLSPDTKLEPSEDDGKP
ELLEEMEASPTELIAVEGTEILQDFQNKTDGQVSGEAIKMFPTIKTPEAGTVITTADEIE
LEGATQWPHSTSASATYGVEAGVVPWLSPQTSERPTLSSSPEINPETQAALIRGQDSTIA
ASEQQVAARILDSNNQTTVSPVEFNTEVATPPFSLLETSNETDFLIGINEESVEGTAIYL
PGPDRCKMNPCLNGGTCYPTETSYVCTCVPGYSGDQCELDFDECHSNPCRNGATCVDGFN
TFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAHLTSI
LSHEEQMFVNRVGHDYQWIGLNDKMFEHDFRWTDGSTLQYENWRPNQPDSFFSAGEDCVV
IIWHENGQWNDVPCNYHLTYTCKKGTVARGQPPVVENAKTFGKMKPRYEINSLIRYHCKD
GFIQRHLPTIRCLGNGRWAIPKITCMNPSAYQRTYSMKYFKNSSSAKDNSINTSKHDHRW
SRRWQESRR
NT seq
7230 nt
NT seq
+upstream
nt +downstream
nt
atgttcataaatataaagagcatcttatggatgtgttcaaccttaatagtaacccatgcg
ctacataaagtcaaagtgggaaaaagcccaccggtgaggggctccctctctggaaaagtc
agcctaccttgtcatttttcaacgatgcctactttgccacccagttacaacaccagtgaa
tttctccgcatcaaatggtctaagattgaagtggacaaaaatggaaaagatttgaaagag
actactgtccttgtggcccaaaatggaaatatcaagattggtcaggactacaaagggaga
gtgtctgtgcccacacatcccgaggccgtgggcgatgcctccctcaccgtggtcaagctg
ctggcaagtgatgcgggtctctaccgctgtgacgtcatgtacgggattgaagacacacaa
gacacggtgtcactgactgtggatggggttgtgtttcactacagggcggcaaccagcagg
tacacactgaattttgaggctgctcagaaggcttgtttggacgttggggcagtcatagca
actccagagcagctctttgccgcctatgaagatggatttgagcagtgtgacgcaggctgg
ctgtctgatcagactgtcagatatcccatccgggctcccagagtaggctgttatggagat
aagatgggaaaggcaggagtcaggacctatggattccgttctccccaggaaacttacgat
gtgtattgttatgtggatcatctggatggtgatgtgttccacctcaccgtccccagtaaa
ttcaccttcgaggaggctgcaaaagagtgtgaaaaccaggatgccaggctggcaacagtg
ggggaactccaggcggcatggaggaacggctttgaccagtgcgattacgggtggctgtcg
gatgccagcgtgcgccaccctgtgactgtggccagggcccagtgtggaggtggtctactt
ggggtgagaaccctgtatcgttttgagaaccagacaggcttccctccccctgatagcaga
tttgatgcctactgctttaaacgtcgaatgagtgatttgagtgtaattggtcatccaata
gattcagaatctaaagaagatgaaccttgtagtgaagaaacagatccagtgcatgatcta
atggctgaaattttacctgaattccctgacataattgaaatagacctataccacagtgaa
gaaaatgaagaagaagaagaagagtgtgcaaatgctactgatgtgacaaccaccccatct
gtgcagtacataaatgggaagcatctcgttaccactgtgcccaaggacccagaagctgca
gaagctaggcgtggccagtttgaaagtgttgcaccttctcaaaatttctcggacagctct
gaaagtgatactcatccatttgtaatagccaaaacggaattgtctactgctgtgcaacct
aatgaatctacagaaacaactgagtctcttgaaattacatggaagcctgagacttaccct
gaaacatcagaacatttttcaggtggtgagcctgatgttttccccacagtcccattccat
gaggaatttgaaagtggaacagccaaaaaaggggcagaatcagtcacagagagagatact
gaagttggtcatcagggacgtgaacatactgaacctgtatctctgtttcctgaagagtct
tcaggagagattgccattgaccaagaatctcagaaaatagcctttgcaagggctacagaa
gtaacatttggtgaagaggtagaaaaaagtacttctgtcacatacactcccactatagtt
ccaagttctgcatcagcatatgtttcagaggaagaagcagttaccctaataggaaatcct
tggccagatgacctgttgtctaccaaagaaagctgggtagaagcaactcctagacaagtt
gtagagctctcagggagttcttcgattccaattacagaaggctctggagaagcagaagaa
gatgaagatacaatgttcaccatggtaactgatttatcacagagaaatactactgataca
ctcattactttagacactagcaggataatcacagaaagcttttttgaggttcctgcaacc
accatttatccagtttctgaacaaacttctgcaaaagtggtgcctaccaagtttgtaagt
gaaacagacacttctgagtggatttccagtacctctgttgaggaaaagaaaaggaaggag
gaggagggaactacaggtacggcttctacagttgaggtatattcatctacacagagatcg
gatcaattaattttaccctttgaattagaaagtccaaatgtagctacatctagtgattca
ggtaccaggaaaagttttatgtccttgacaacaccaacacagtccgaaagggaaatgaca
gattctactcctgtctttacagaaacaaatacattagaaaatttgggggcacagaccact
gagcacagcagtgtccatcatcctggggttcaggaagggctgaccactctcccacgtagt
cctgcctctgtctttatggagcagggctctggagaagctgctgccgacccagaaaccacc
actgtttcttcattttcattaaacttagagtatgaaattcaagctgaaaaggaagcagct
ggcactttgtctccgcatgtggaaactacattctccactgagccaacaggactggttttg
agtacagtaatggacagagaagttgctgaaaatataacccaaacatccagggaaatagtg
atttcagagcgattagaagaaccaaattatggggcagaaataaggggcttttccacaggt
tttcctttggaggaagatttcagtggtgactttagagaatactcaacagtgtctcatccc
atagcaaaagaagaaacggtaatgacggaaggctctggagatgcagcatttagggacacc
cagacttcaccatctacagtacctacttcagttcacatcagccacatatctgactcagaa
ggacccagtagcaccatggtcagcacttcagccttcccctgggaagagtttacatcctca
gctgagggctcaggtgagcaactggtcacagtcagcagctctgttgttccagtgcttccc
agtgctgtgcgaaagttttctggtacagcttcctccattattgatgaaggattgggagaa
gtgggtactgtcaatgaaattgatagaagatccaccattttaccaacagcagaagtggaa
ggtacgaaagctccagtagagaaggaggaagtaaaggtcagtggcacagtttcaacaaac
tttccccaaactatagagccagccaaattatggtctaggcaagaagtcaaccctgtaaga
caagaaattgaaagtgaaacaacatcagaggaacaaattcaagaagaaaagtcatttgaa
tcccctcaaaactctcctgcaacagaacaaacaatctttgattcacagacatttactgaa
actgaactcaaaaccacagattattctgtactaacaacaaagaaaacttacagtgatgat
aaagaaatgaaggaggaagacacttctttagttaacatgtctactccagatccagatgca
aatggcttggaatcttacacaactctccctgaagctactgaaaagtcacattttttctta
gctactgcattagtaactgaatctataccagctgaacatgtagtcacagattcaccaatc
aaaaaggaagaaagtacaaaacattttcccaaaggcatgagaccaacaattcaagagtca
gatactgagctcttattctctggactgggatcaggagaagaagttttacctactctacca
acagagtcagtgaattttactgaagtggaacaaatcaataacacattatatccccacact
tctcaagtggaaagtacctcaagtgacaaaattgaagactctaacagaatggaaaatgtg
gcaaaagaagttggaccactcgtatctcaaacagacatctttgaaggtagtgggtcagta
accagcacaaccttaatagaaattttaagtgacactggagcagaaggacccacggtggca
cctctccctttctccacggacatcggacatcctcaaaatcagactctcaggtgggcagaa
gaaatccagactagtagaccacaaaccataactgaacaagactctaacaagaattcttca
acagcagaaattaacgaaacaacagcctcgtctactgattttctggctagagcttatggt
tttgaaatggccaaagaatttgttacatcagcaccaaaaccatctgacttgtattatgaa
ccttctggagaaggatctggagaagtggatattgttgattcatttcacacttctgcaact
actcaggcaaccagacaagaaagcagcaccacatttgtttctgatgggtccctggaaaga
catcctgaggtgccaagcgctaaagctgttactgctgatggattcccaacagtttcagtg
atgctgcctcttcattcagagcagaacaaaagctcccctgatccaactagcacactgtca
aatacagtgtcatatgagaggtccacagacggtagtttccgagaccgtttcagggaattc
gaggattccaccttaaaacctaacagaaaaaaacccactgaaaatattatcatagacctg
gacaaagaggacaaggatttaatattgacaattacagagagtaccatccttgaaattcta
cctgagctgacatcggataaaaatactatcatagatattgatcatactaaacctgtgtat
gaagacattcttggaatgcaaacagatatagatacagaggtaccatcagaaccacatgac
agtaatgatgaaagtaatgacgacagcactcaagttcaagagatctatgaggcagctgtc
aacctttctttaactgaggaaacatttgagggctctgctgatgttctggctagctacact
caggcaacacatgatgaatcaatgacttatgaagatagaagccaactagatcacatgggc
tttaacttcacaactgggatccctgctcctagcacagaaacagaattagacgttttactt
cccacggcaacatccctaccaattcctcataagtctgccacagttattccagagattgaa
ggaataaaagctgaagcaaaagccctggatgacatgtttgaatcaagcactttgtctgat
ggtcaagctattgcagaccaaagtgaaataataccaacattgggccaatttgaaaggact
caggaggagtatgaagacaaaaaacatgctggtccttcttttcagccagaattctcttca
ggagctgaggaggcattagtagaccatactccctatctaagtattgctactacccacctt
atggatcagagtttaacagaggtgcctgatgtgatggaaggatccaatcccccatattac
actgacacaacattagcagtttcaacatttgcgaagttgtcttctcagacaccatcatct
cccctcactatctactcaggcagtgaagcctctggacacacagagatcccccagcccagt
gctctgccaggaatagacgtcggctcatctgtaatgtccccacaggattcttttaaggaa
attcatgtaaatattgaagcgactttcaaaccatcaagtgaggaataccttcacataact
gagcctccctctttatctcctgacacaaaattagaaccttcagaagatgatggtaaacct
gagttattagaagaaatggaagcttctcccacagaacttattgctgtggaaggaactgag
attctccaagatttccaaaacaaaaccgatggtcaagtttctggagaagcaatcaagatg
tttcccaccattaaaacacctgaggctggaactgttattacaactgccgatgaaattgaa
ttagaaggtgctacacagtggccacactctacttctgcttctgccacctatggggtcgag
gcaggtgtggtgccttggctgagtccacagacttctgagaggcccacgctttcttcttct
ccagaaataaaccctgaaactcaagcagctttaatcagagggcaggattccacaatagca
gcatcagaacagcaagtggcagcgagaattcttgattccaataatcagacaacagtaagc
cctgtggaatttaatactgaggttgcaacaccaccattttcccttctggagacttctaat
gaaacagatttcctgattggcattaatgaagagtcagtggaaggcacggcaatctattta
ccaggacctgatcgctgcaaaatgaacccgtgccttaacggaggcacctgttatcctact
gaaacttcctatgtatgcacctgtgtgccaggatacagcggagaccagtgtgaacttgat
tttgatgaatgtcactctaatccctgtcgtaatggagccacttgtgttgatggttttaac
acattcaggtgcctctgccttccaagttatgttggtgcactttgtgagcaagataccgag
acatgtgactatggctggcacaaattccaagggcagtgctacaaatactttgcccatcga
cgcacatgggatgcagctgaacgggaatgccgtctgcagggcgcccatctcacaagcatc
ctgtctcacgaagaacaaatgtttgttaatcgtgtgggccatgattatcagtggataggc
ctcaatgacaagatgtttgagcatgacttccgttggactgatggcagcacactgcaatat
gagaattggcgacccaaccagccagacagcttcttttctgctggagaagactgtgttgta
atcatttggcatgagaatggccagtggaatgatgttccctgcaattaccatctcacctat
acgtgcaagaaaggaacagttgctcgcggccagccccctgttgtagaaaatgccaagacc
tttggaaagatgaaacctcgttatgaaatcaactccctgattagataccactgcaaagat
ggtttcattcaacgtcaccttccaactatccggtgcttaggaaatggaagatgggctata
cctaaaattacctgcatgaacccatctgcataccaaaggacttattctatgaaatacttt
aaaaattcctcatcagcaaaggacaattcaataaatacatccaaacatgatcatcgttgg
agccggaggtggcaggagtcgaggcgctga
DBGET
integrated database retrieval system
