Pan troglodytes (chimpanzee): 461968
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Entry
461968 CDS
T01005
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptr03021
]
461968 (CHD1)
03036 Chromosome and associated proteins [BR:
ptr03036
]
461968 (CHD1)
Transcription machinery [BR:
ptr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
461968 (CHD1)
Chromosome and associated proteins [BR:
ptr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
461968 (CHD1)
SLIK complex
461968 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
461968
NCBI-ProteinID:
XP_009447676
Ensembl:
ENSPTRG00000017103
VGNC:
3950
LinkDB
All DBs
Position
4:complement(96531796..96605654)
Genome browser
AA seq
1667 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAILKKQQQQQQQQQHQASSNS
GSEEDSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETES
DYEPKNKVKSRKPQNRSKSKNGKKILGPKKRQIDSSEEDDDEEDYDNDKRSSRRQATVNV
SYKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEAD
GDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETK
RWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSE
CSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLE
LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS
TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDK
AFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI
MPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSA
LQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEAL
QHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKG
ELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHR
IGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPF
NKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFK
VANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQI
SFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKK
FGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKVKGP
TFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSN
LLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKK
EALSGVLSESKSDGRERSKKSSVSDAPVHITASGEPVPISEESEELDQKTFSICKERMRP
VKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVS
KFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNPHVIRNPDVERLKENTNHDDSSRDS
YSSDRHLTQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYSDREK
HRKLDDHRSRDHRSNLEGSLKDRSHSDHRSHSDHRLHSDHRSSSEYMHHKSSRDYRYHSD
WQMDHRASSSGPRSPLDQRSPYGSRSPFEHSVEHKNTPEHTWSSRKT
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctctggatctggttcgagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactccggatctgaatcaggcagt
cagtcagagtctgagtcagacacttcccgagaaaacaaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagtcctagtattctggccgttcagagatctgca
atcctcaagaagcagcaacagcagcagcaacaacagcaacatcaagcctcatctaatagc
ggatcagaagaggattcctctagcagtgaagattccgatgactcatcaagtgaggtcaaa
aggaaaaagcataaagatgaagattggcaaatgtctgggtcaggatctccatctcagtct
ggttcagattcagaatctgaagaagagagagataaaagcagttgtgatgaaacagaatct
gattatgagccaaaaaacaaagtcaaaagcagaaaacctcaaaatagatctaagtcaaaa
aatggaaagaagattcttggaccaaaaaagagacagattgattcatctgaggaggatgat
gatgaagaagattatgataatgataaaagaagttctcgtcgccaagcaactgttaatgtt
agctataaggaggatgaagaaatgaaaacagattctgatgacctactggaagtctgtgga
gaggatgttcctcaacctgaggaagaggaatttgaaaccatagaaagatttatggattgt
cggattgggagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagat
ggtgacccaaatgcaggctttgaaaaaaacaaagaaccaggagagattcagtatttaatt
aaatggaaaggatggtcccatatccacaacacttgggagacagaagaaaccctcaagcag
cagaatgttagaggaatgaaaaaattggataattataagaaaaaagatcaggaaacaaaa
agatggttgaaaaatgcctctccagaagatgtggaatattataattgccagcaagaactt
acagatgatctacataaacagtatcaaatagtggaacgtataattgctcattccaatcaa
aagtcagcagctggttatcctgattattactgcaaatggcagggccttccatactcagag
tgcagctgggaagatggagctctcatttccaaaaagtttcaagcatgcattgatgagtat
tttagcaggaaccaatcaaaaaccactccttttaaagattgcaaagtattaaaacaaagg
ccaaggtttgtagccctgaagaagcagccatcctatattggaggacatgagggcttagaa
ttaagagattatcaactgaatggtttaaattggcttgctcattcttggtgcaaaggaaat
agttgcatactcgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctg
aattatttgtttcatgaacatcaattatatggaccttttttattggtagtaccgctctcc
actcttacttcctggcaaagggaaattcagacttgggcttctcaaatgaatgctgtggtt
tatttaggtgacattaacagcagaaacatgataagaactcatgaatggacgcatcatcag
accaaacggttaaaatttaatatactgttaacaacttatgaaattttattaaaggataag
gcattccttggaggtctaaattgggcatttataggtgttgatgaagcacaccgattaaag
aatgatgactcacttctgtataaaactttaatagattttaaatccaatcatcgtctcctt
atcactggaactcctttacagaattccctcaaagagctctggtctttgctacatttcatt
atgccagaaaagttttcttcctgggaagattttgaagaagaacatggcaaagggagagaa
tatggttatgcaagccttcacaaggagcttgagccatttctgttacgccgagttaagaaa
gatgtggaaaaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgct
ttacagaaacaatattacaaatggattttaactaggaattacaaagccctcagcaaaggt
tccaagggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaac
cattgctacctcattaaaccaccagataataatgaattctataataaacaggaggcctta
caacacttaattcgtagtagcggaaaattgattcttcttgacaagctattaattcgccta
agagaacgaggcaatcgagttcttattttttcacaaatggtgcggatgttagatatactt
gcagaatatttgaaatatcgtcaattcccctttcaaagattagatggatcaataaaagga
gaactgaggaaacaagctttagatcattttaatgctgagggatcagaggatttttgcttt
ttgctgtccacaagagctggaggtctagggattaatttagcctctgctgacactgttgtt
atatttgattctgattggaatccacagaatgatcttcaggcacaggctagagcccatcgt
attgggcaaaagaaacaggtgaatatttatcgtctagttacaaagggatcagttgaagaa
gatattcttgaaagggccaaaaagaagatggttttagatcatcttgtaattcaaagaatg
gacacaactgggaagacagtactacatacaggttctgccccatcaagttctactcctttc
aataaagaagagttatcagccattttaaagtttggtgctgaagaactttttaaggaacct
gaaggagaagaacaagagccccaggaaatggatatagatgaaatcttgaagagagctgaa
actcatgaaaatgaaccaggtcctttaactgtaggagatgaattgctttcccagttcaag
gttgccaacttctcaaatatggatgaggatgacattgagttggaacctgaaagaaattca
aagaattgggaggaaattattccagaagatcaaagaagacgattagaagaagaagaaaga
caaaaggaacttgaagaaatttatatgctcccaagaatgagaaattgtgcaaaacagatt
agtttcaatggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagt
gattccatctcagaagggaaaaggccaaagaaacgtggaagaccacggactattcctcgg
gagaatattaaaggatttagtgatgcagaaattaggcggtttatcaagagctataagaaa
tttggtggtcctctggaaagattagatgcaattgctcgagatgctgagttagttgataag
tcagaaacagaccttagacgactgggagaattggtacataatggttgcattaaagcatta
aaggatagttcttcaggaacagaacgaacaggtggtagactcggaaaagtgaagggtcca
acattccgaatatcaggagtacaggtgaatgccaaactagtcatctcccatgaagaagaa
ttaatacctttgcacaaatccattccttctgatccagaagaaagaaagcagtatactatc
ccatgccacacaaaggcagctcattttgatatagactggggcaaagaagatgattccaat
ttgttaattggcatctatgaatatggatatggaagctgggaaatgattaaaatggatcct
gacctcagtctaacacacaagattcttccagatgatcccgataaaaaaccacaagcaaaa
cagttgcagacccgtgcagactacctcatcaaattacttagtagagatcttgcaaaaaaa
gaagctctttctggtgtgttgagtgaatccaagtctgatggtagggaaagatccaagaaa
tcttcagtgtcagatgctccagttcatatcacggcaagtggtgaaccagttcccatttct
gaagaatctgaagagctggatcagaagacattcagcatttgtaaagaaagaatgaggcct
gttaaagcagctttgaaacaacttgataggcctgagaaaggcctttcagaaagagaacaa
ctagaacatactagacaatgtttaataaaaattggagaccatatcacagaatgtctaaaa
gagtatacaaatcctgaacaaattaagcaatggagaaaaaacctgtggatttttgtatct
aagtttactgaatttgatgcaagaaaattacataaattatataagcacgctattaaaaaa
cggcaggagtctcagcaaaacaatgatcaaaacagcaacttgaatcctcacgtgattaga
aatccagatgtggaaagattaaaagagaatacaaatcacgatgatagcagcagggacagt
tattcctctgatagacacttaactcagtaccatgatcatcataaagaccgacatcaggga
gattcttacaaaaaaagtgattccaggaaaagaccctattcttcttttagtaatggtaaa
gaccatcgtgattgggatcactacaagcaagacagcagatattacagtgacagagagaaa
cacagaaaactggatgatcacaggagtagagatcacaggtcaaatttggaaggaagttta
aaagatagatctcattctgatcatcgttctcactcagatcatcggttacattcagaccac
cggtcaagttctgaatatatgcaccataaatcttccagggattataggtatcactcagac
tggcaaatggaccacagagcttccagcagtggccctaggtcaccactagatcagagatct
ccttatggctccagatctccatttgaacattcagttgaacacaaaaatacaccggagcat
acctggagtagtcggaaaacataa
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integrated database retrieval system
