Pan troglodytes (chimpanzee): 462021
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Entry
462021 CDS
T01005
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X2
KO
K04558
synphilin-1
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr05012
Parkinson disease
ptr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
462021 (SNCAIP)
05022 Pathways of neurodegeneration - multiple diseases
462021 (SNCAIP)
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Gene cluster
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
462021
NCBI-ProteinID:
XP_016809169
Ensembl:
ENSPTRG00000017175
VGNC:
13595
UniProt:
A0A2J8LK75
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Position
4:120059565..120214514
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AA seq
969 aa
AA seq
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MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDTQNEDRSVSSSSWNCGISTLITNT
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNESDDQKNQKVVEYQKGGESDLGPQPQEL
GPGDGVGGPPGKSSEPSTSLGELEHYDLDMDEILDVPYIKSSQQLASFTKVTSEKRILGL
CTTINGLSGKACSTGSSESSSSNMAPFCVLSPVKSPHLRKASAVIHDQHKLSTEETEISP
PLVKCGSAYEPENQSKDFLNKTFSDPHGRKVEKTTPDCQLRAFHLQSSAAESKPEEQVSG
LNRTSSQGPEERSEYLKKVKSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHIAASQ
GHAECLQHLTSLMGEDCLNERNTEKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDF
PSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYG
ANVTMQNHAGEKPSQSAERQGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQ
NQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQWKSPDAEDDSVAKSKPGVQEGIQVLGS
LSASSRARPKAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQASSRNSKKIPLEKR
ELKLARLRQLMQRSLSESDTDSNNSEDPKTTPVRKADRPRPQPIVESVESMDSAESLHLM
IKKHTLASGGRRFPFSIKASKSLDGHSPSPTSESSEPDLESQYPGSGSIPLNQPSGDPQQ
PSPDSTAAQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQPSLELNGEKDKDK
GRTLQRTSTSNESGDQLKRPFGAFRSIMETLSGNQNNNNNYQAANQLKTSTLPLTSLGRK
TDAKGNPASSASKGKNKAEMYSSCINLSSNMLIEEHLRNDARHNDINRKMKKSYSIKHIA
EPESKELFL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaatacctcgatttggatgaaattgactttagtgatgacatatcttat
tcagtcacatcactcaagacgatcccagaactgtgccgaagatgtgatacgcaaaacgaa
gacagatcagtttctagctctagctggaattgtggcatctcaactcttattacaaacacg
caaaagcccacaggaatcgctgatgtgtacagtaagttccgcccagtgaagcgggtttcg
ccactgaaacatcagccagagactctggagaacaatgaaagtgatgaccaaaagaatcag
aaagtggttgagtaccagaaagggggtgagtctgacctgggcccccagcctcaggagctt
ggccctggagatggagtgggcggcccaccaggtaagagctctgagcccagcacatcgctg
ggtgaactggagcactacgacctcgacatggatgagattctggatgtgccttatattaaa
tccagtcagcagcttgcctcttttaccaaggtgacttcagaaaaaagaattttgggctta
tgcacaaccatcaatggcctttctggcaaagcctgctctacaggaagttctgagagctca
tcatccaacatggcaccattttgtgttctttctcccgtgaaaagccctcacttgagaaaa
gcatcagctgtcatccacgatcagcacaagctgtccactgaagaaaccgagatctcacct
cctctggttaaatgtggctctgcatatgagcctgaaaaccagagtaaagacttcctaaac
aagacatttagtgatcctcatggtcgaaaagttgagaagacaacaccagactgccagctc
agggccttccacctacaatcctcagcagcagaatccaaaccagaagagcaggtcagtggc
ctaaaccggaccagctcccaaggcccagaagaaaggagtgagtatctgaaaaaagtgaaa
agcatcttgaacattgttaaagaaggacagatctctctcctgccacacctagctgcagac
aatctagacaaaattcacgacgaaaatggaaacaatctattacatattgcggcgtcacag
ggacacgcagagtgtctacagcacctcacttctttgatgggagaagactgcctcaatgag
cgcaacactgagaagttgactccagcaggcctggccattaagaatggtcagttggagtgc
gtacggtggatggtgagcgaaacagaagccattgcagaactgagttgttctaaggatttt
ccaagccttattcattacgcaggttgctatggccaggaaaagattcttctatggcttctt
cagtttatgcaagaacagggcatctcgttggatgaagtagaccaggatggcaacagtgcc
gttcacgtagcctcacagcatggctaccttggatgcatacagaccttggttgaatatgga
gcaaatgtcaccatgcagaaccacgctggggaaaagccctcccagagcgccgagcggcag
gggcacaccctgtgctccaggtacctggtggtggtggagacctgcatgtcgctggcctct
caagtggtgaagttaaccaagcagctaaaggaacaaacagtagaacgtgtcacgctgcag
aaccaactccaacaatttctagaagcccagaaatcagagggcaagtcactcccttcttca
cccagttcaccatcctcacctgcctccagaaagtcccagtggaaatctccagatgcagaa
gatgattctgtagccaaaagcaagccaggagtccaagaggggattcaggttcttggaagc
ctgtcagcctccagccgggctagacccaaagcaaaagatgaagattctgataaaatctta
cgccagttattgggaaaggaaatctcagaaaatgtctgcacccaggaaaaactgtccttg
gaattccaggatgctcaggcttcctctagaaattctaaaaagatcccactggagaagagg
gaactgaagttagccaggctgagacagctgatgcagaggtcactgagtgagtctgacaca
gactccaacaactctgaggaccccaagactaccccagtgaggaaggctgaccgaccaagg
ccgcagcccattgtagaaagcgtagagagtatggacagcgcagaaagcctgcacctgatg
attaagaaacacaccttggcatcagggggacgcaggtttcctttcagcatcaaggcctcc
aaatccctggatggccacagcccatctcccacctcagagagcagcgaaccagacttagaa
tcccagtatccaggctcagggagtattcctctaaaccagccctctggtgaccctcagcag
cccagccctgacagcactgctgcccagaaagttgccacaagtcccaagagtgccctcaag
tctccatcttccaagcgcaggacatctcagaacttaaaactgagagttacctttgaggag
cctgtggtgcagatggagcagcctagccttgaactgaatggagaaaaagacaaagataag
ggcaggactctccagcggacctccacaagtaacgaatcaggggatcaactgaaaaggcct
tttggagcatttcgatctatcatggagacactaagtggcaaccaaaacaataataataac
taccaggcagccaaccagctgaaaacctctacattgcccttgacctcacttgggaggaag
acagatgccaagggaaaccctgccagctccgctagcaaaggaaagaataaggcagaaatg
tacagcagctgcatcaatctttcctctaacatgctgattgaagagcatctgcgtaacgac
gcacggcataatgacatcaatagaaaaatgaagaaatcctacagcataaagcacattgct
gagccggagtcaaaagaactcttcttgtaa
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