Pan troglodytes (chimpanzee): 462224
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Entry
462224 CDS
T01005
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
462224 (SOX30)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
462224 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
462224
NCBI-ProteinID:
NP_001267216
Ensembl:
ENSPTRG00000017471
VGNC:
13596
UniProt:
G2HE48
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Position
4:complement(155311221..155356870)
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AA seq
753 aa
AA seq
DB search
MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPTSPTLSAAASATLASSCGEAVA
SGLQPAVRRLLQVKPEQVLLLPQPQAQNEEAAASPAQARLLQFRPDLRLLQPPTASDGAT
SRPELHPVQPLALHVKAKKQKLGPSLDQSVGPRGAVETGPRASRVVKLEGPGPALRYFRG
DEKGKLEAEEVMRDAMQGGAGKSPAAIREGVIKTEEPERLLEDCRLGAEPASNGLVHGSA
EVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTPVPIKMQS
LLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANP
AANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSV
SNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQNPITHPVGETSPAIQLPTPAVQSPS
PVTLFQPSVSSAAQVAVQDPSLPVYPALPPQHFTGPSQTDTHQLHSEATHTVKQPTPVSL
ESANRISSSASTAHARFATSTIQPPKEYSSVSPCPRSAPIPQASPIPHPHVYQPPPLDHP
ATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLSYYEDGYPKHE
GIFSTLNRDYSFRDYSSECTHSENSRSCENMNGTSYYNSHSHSGEENLNPVPQLDIGTLE
NVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRDL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccagacccgagccgccgtctcagccgcgcccgttgcgtcccgctccgccc
ccgctgccggtcgagggcacctccttttgggcagcagccatggagccccctccgacgtct
cccacactgagcgcggcagccagtgcgaccttggcctcgtcgtgcggggaggcagtggcg
tccggcttacagcccgcggtgcggcggctgctgcaggtgaagccagagcaggtgttgctg
ctaccacagcctcaggcccagaacgaggaagccgctgcctcgcccgcgcaggcgcggctg
ttgcagttcaggcccgacctgcggctcctgcagccgccgacagcgtcagacggcgccaca
tccaggcccgagttgcacccggtgcagcccctggcgctgcatgtcaaggccaagaagcag
aagctggggcccagcctggatcagtcagtggggcctcgaggggccgtcgaaaccggtcct
agagcctccagggtggtcaagttggaaggccccgggccggccctccgctacttccgaggg
gacgagaagggcaagctggaggcggaggaggtcatgagaaacgcgatgcaaggcggggca
ggcaaaagcccggcagccatccgagaaggtgtgatcaaaacggaggaacccgagagactc
ctcgaggactgcaggctcggcgcggagcccgcgtccaatggcctggttcatggcagcgcg
gaggtcatcttggccccaacgtccggtgcctttgggccgcaccagcaagaccttaggatc
cctttgacgctccacacggtcccccctggggcccggatccagtttcagggagctccgcct
tcagagctgataagattgaccaaggtccccctgacaccagtgcctattaaaatgcagtcc
ctactggagccttctgtaaaaattgaaaccaaagatgtcccgctcaccgtgttgccctca
gatgcaggcataccagatactcccttcagtaaggacagaaatggtcatgtgaagcgaccc
atgaacgcatttatggtttgggcaaggatccaccgaccagcactagccaaagctaaccca
gcagccaacaatgcagaaatcagtgtccagcttgggttagagtggaacaaacttagtgaa
gaacaaaagaaaccctattacgatgaagcacaaaagattaaggaaaagcacagagaggaa
tttcctggttgggtttatcagcctcgtccagggaagcgaaaacgattccctctaagtgtt
tccaatgtattttctggtaccacacagaatatcatctctacaaatcctacaacagtttat
ccttaccgctcacctacgtactctgtggtaattcccagcctacagaatcccatcactcat
ccagttggtgaaacctcacctgctatccagctgcccacacctgcagtccagagcccaagc
cctgtcacacttttccagcccagcgtctccagtgctgctcaggtggctgtccaggatcca
agtctacctgtctatccagcactcccaccccaacactttactgggccttcccaaacagac
actcatcagctgcattctgaagccactcacactgtgaagcaacccactcctgtctctcta
gagagcgccaacaggatttcaagtagtgcaagtactgcccatgccagatttgcaacttcg
accatccaacctcctaaggagtattccagcgtttccccttgtcccagaagtgctccaatc
ccccaggcttctcccattccacacccacatgtctaccagccccctccccttgaccatcca
gccacactgttcgggacaccaccaagattctcttttcatcacccttacttcctacccgga
cctcactacttcccatcaagtacatgcccttacagtaggcctccctttggctatggaaat
tttccgagttcaatgccagagtgccttagttattatgaagacaggtacccaaaacatgag
ggtatcttttcaactttaaatagagactattcttttagagactactcaagtgaatgcaca
catagtgaaaattctcggagttgtgagaacatgaatggaacttcttactataatagtcat
agccacagtggggaagaaaacttaaaccctgtgcctcagctggacattggaaccttggag
aatgtcttcacagccccgacatcaactccttctagcatccagcaagtcaatgtcaccgac
agtgatgaggaggaagaagaaaaagtgctcagggatttataa
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