KEGG   Pan troglodytes (chimpanzee): 462344
Entry
462344            CDS       T01005                                 
Symbol
RACK1
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03010  Ribosome
ptr05162  Measles
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    462344 (RACK1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05162 Measles
    462344 (RACK1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    462344 (RACK1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptr04147]
    462344 (RACK1)
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     462344 (RACK1)
Exosome [BR:ptr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   462344 (RACK1)
  Exosomal proteins of colorectal cancer cells
   462344 (RACK1)
  Exosomal proteins of bladder cancer cells
   462344 (RACK1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_Gbeta Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd DSE1_N WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_Aladin ANAPC4_WD40 TRM82_WD Beta-prop_TEP1_C ASA1 Beta-prop_DCAF12 Beta-prop_WDR41 Beta-prop_HPS5 CFAP251_N Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR75_2nd Cytochrom_D1 Beta-prop_NUP159_NUP214 Tricorn_2nd Beta-prop_pof12 WDR54
Other DBs
NCBI-GeneID: 462344
NCBI-ProteinID: XP_518165
Ensembl: ENSPTRG00000022734
VGNC: 7114
UniProt: H2QZD6
LinkDB
Position
4:complement(178719588..178729106)
AA seq 395 aa
MPCNFPLPFALHGAAILSRNVSWGSPFCMVERVFPVPAGGFSLSLSLQGGGRSGCGAGFS
KPSSAILVAAATHALAAAMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIM
WKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV
GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN
PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN
EGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAE
PPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgccgtgcaatttccctctgccttttgcattacatggcgccgccatcttgagcagaaat
gtatcatggggctcgccattttgcatggtcgagcgggtatttccggttccggcggggggc
ttttctctctctctttcactgcaaggcggcggcaggagcggttgtggtgctggtttctct
aagccatccagtgccatcctcgtcgctgcagcgacacacgcgctcgccgccgccatgact
gagcagatgacccttcgtggcaccctcaagggccacaacggctgggtaacccagatcgct
actacaccgcagttcccggacatgatcctctccgcctctcgagataaaaccatcatcatg
tggaagctgaccagggatgagaccaactatggaattccacagcgtgctctgcggggtcac
tcccactttgttagtgatgtggttatctcctcagatggccagtttgccctctcaggctcc
tgggatggaaccctgcgcctctgggatctcacaacgggcaccaccacgaggcgatttgtg
ggccataccaaggatgtgctgagtgtggccttctcctctgacaaccggcagattgtctct
ggatctcgagataaaaccatcaagctatggaataccctgggtgtgtgcaaatacactgtc
caggatgagagccactcagagtgggtgtcttgtgtccgcttctcgcccaacagcagcaac
cctatcatcgtctcctgtggctgggacaagctggtcaaggtatggaacctggctaactgc
aagctgaagaccaaccacattggccacacaggctatctgaacacggtgactgtctctcca
gatggatccctctgtgcttctggaggcaaggatggccaggccatgttatgggatctcaac
gaaggcaaacacctttacacgctagatggtggggacatcatcaacgccctgtgcttcagc
cctaaccgctactggctgtgtgctgccacaggccccagcatcaagatctgggatttagag
ggaaagatcattgtagatgaactgaagcaagaagttatcagtaccagcagcaaggcagaa
ccaccccagtgcacctccctggcctggtctgctgatggccagactctgtttgctggctac
acagacaatctggtgcgagtgtggcaggtgaccattggcacacgctag

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