Pan troglodytes (chimpanzee): 462573
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Entry
462573 CDS
T01005
Symbol
SKIC2
Name
(RefSeq) superkiller complex protein 2
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
462573 (SKIC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
462573 (SKIC2)
Enzymes [BR:
ptr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
462573 (SKIC2)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
462573 (SKIC2)
mRNA degradation factors
3'-5' decay
Ski complex
462573 (SKIC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
ResIII
DUF3516
Motif
Other DBs
NCBI-GeneID:
462573
NCBI-ProteinID:
XP_001160927
Ensembl:
ENSPTRG00000017997
VGNC:
52098
UniProt:
K7CW25
A0ACM8R889
LinkDB
All DBs
Position
5:37756362..37766999
Genome browser
AA seq
1246 aa
AA seq
DB search
MMETERLVLPPPDPLDLPLRAVELGCTGHWELLNLPGAPESSLPHGLPPCAPDLQQEAEQ
LFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAVLGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSATTSLSLRRPPGPASQSLWGNPTQYPFWPGGMDEPTITDLNTREEAEEEIDFE
KDLLTIPPGFKKGMDFAPKDCPTPAPGLLSLSCLLEPLDLGGGDEDENEAVGQPGGPRGD
AVSASPCSAPLARASSLEDLVLKEASTAVSTPEAPEPPSQEQWAIPVDATSPVGDFYRLI
PQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKKLGALEEPDMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKSLS
AGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVAYPDD
LVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAA
VTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRF
PAQYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV
ACAMSSHELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRA
VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagagcgacttgtgctacctcctccagatcccctggacctaccccttcgg
gccgtggagctcggatgcacggggcactgggagctgctgaacttgcctggagctccagag
agtagccttccccatggcctccctccttgtgccccagatctgcagcaagaagcagaacag
ttgtttctgtcatccccagcctggctgcctctgcatggtgtggagcactcagcccgaaaa
tggcagaggaagacggatccctggtctcttttggctgtcctgggagccccagtcccatcc
gacctacaggcccaaagacacccaaccacaggccagatactgggttacaaagaggtcttg
ctggagaacacaaatctctcggccacaacctccttgtctcttcgccggcctccagggcca
gcctcccagtccttatggggaaatccaactcagtatcccttctggccaggggggatggat
gaacccaccataacagatctgaacacacgggaggaggctgaggaggagatagactttgag
aaagatcttcttactattccacctggtttcaagaaaggcatggactttgcaccaaaagat
tgtccaactccagctcctggactgctaagccttagctgtctgttggaacctctggatttg
ggtggaggtgacgaggatgagaatgaggcagtgggacagccaggaggtcccagaggggac
gctgtttcagcctctccctgcagtgctcccctggcccgagcaagcagcttggaggaccta
gtgttgaaggaagcgtccacagctgtatccaccccagaggccccagagcctccatctcag
gagcagtgggccatccctgtggacgccacctcccctgttggtgatttctatcgcctcatt
ccccagccagccttccagtgggcatttgagccagatgtgtttcagaaacaggccatcctg
cacttggagcggcatgactctgtctttgtcgcagctcacacatctgcaggaaaaacagtt
gtggctgaatatgccattgccctggcccagaaacacatgacacgcaccatctacacttcg
cccatcaaggccctgagcaaccagaagttccgggacttccgaaacacattcggggatgtg
gggctgctcaccggggatgtacagctgcacccggaggcctcctgcctcatcatgaccaca
gagatccttcgctccatgctgtacagtggctcagatgttattcgggacctggagtgggtc
atctttgatgaggttcactatatcaacgatgccgagcgtggggtcgtgtgggaggaggtg
cttatcatgctacctgaccacgtttctatcatccttctgagtgccactgtccccaacgcc
cttgagtttgctgactggattgggcgactgaagcgtcgtcagatctatgtgattagcact
gtaacccgccccgtgcccctggagcactatcttttcacagggaacagctccaagacccag
ggggagctctttttgttgctggactcccgaggagccttccatacaaaagggtactatgca
gctgtggaggccaagaaggagagaatgagcaaacacgcccagacctttggggccaagcag
cccacacatcaggggggccctgcacaggaccgcggagtgtacctgtccctcctggcctcc
ctccgcacacgtgcccagttgcccgtggtggtgttcaccttctcccggggccgctgtgat
gagcaggcctcaggcctcacctcccttgacctcaccaccagttcggagaagagcgagatc
cacctcttcctgcagcgctgccttgctcgcctccgtggctctgaccgccagctgccccag
gtcctgcacatgtcagagctcctgaatcgcggcctgggtgtgcaccatagcggcatcctg
cccatcctcaaggagatcgtggagatgctcttcagccgtggcctggtcaaggtcttgttt
gccacagagacctttgccatgggagtaaacatgcctgctcgtacagtagtgtttgactcc
atgcgcaaacacgatggctccaccttccgggacctgctccctggggagtatgtgcagatg
gcaggccgggcagggcggaggggcctggaccccacaggcaccgttatcctgctctgcaag
ggccgagtgcccgagatggcagacctgcaccgcatgatgatggggaagccgtcccagctg
cagtcccagttccgcctcacgtacactatgatcctcaacttgctgcgagtggatgccctc
agggtggaggacatgatgaagaggagcttctctgagtttccctcccgcaaagacagcaag
gcccatgaacaggccctggctgaactgaccaagaagctgggagctttggaggagcctgac
atgactggccaactggtcgacctgcctgaatattacagctggggggaggaactgacagag
acccagcacatgatccagcgacgcatcatggagtctgtgaacgggctgaagtctctctca
gcaggaagggtggtggttgtgaagaatcaggagcatcacaacgcattgggagtgatccta
caggtctcctcgaactccaccagcagagtattcacaaccctggtcttgtgtgataagccc
ttgtcccaggacccacaggacagggggccagccactgcagaggtggcttatccagatgac
ctcgtgggattcaagctgttcctgcctgaagggccttgtgaccacaccgtggtcaagctc
cagccaggagatatggctgccatcaccaccaaggtgctccgggtgaatggggagaagatc
ttggaggacttcagcaagaggcagcagccaaaattcaagaaggatcctccccttgcagct
gtgaccactgctgtccaggaactgctgcgtctggctcaggcccacccagccggacccccc
accctcgaccctgtcaatgacctgcagctcaaagatatgtcagttgtagagggtgggctc
cgggcccggaagctggaggagctgatccagggggctcagtgtgtacacagcccccgtttt
cctgcccagtacctgaagctgcgggagcgaatgcagatacagaaggagatggagcggctg
cgcttcctactgtcggatcagtcactgctgctgcttcctgagtaccatcagcgagtagag
gtgctccgaaccctgggttacgtggacgaggcgggcactgtgaagctggcagggcgggtg
gcttgtgccatgagcagccatgagttgctcctcactgagctcatgtttgacaatgcactg
agcaccctgcggcctgaggagattgctgccttgctctctggcctggtctgccagagccct
ggggacgctggggatcagctcccaaacaccctcaagcagggaatagaacgtgtccgggct
gtggccaagcggattggtgaggtccaggtggcttgtggcctgaaccagacggtggaggaa
tttgtgggggagctgaattttgggctggttgaggttgtgtatgagtgggcccggggcatg
cccttctccgagttggcagggctctcagggacccctgagggcctggtggtccgctgcatt
cagcgcctggctgagatgtgtcgctcactgcggggggcagcccgcctggtaggagagcct
gtgctgggtgccaagatggagacagcggctaccttgctacggcgggacatcgtatttgcg
gccagcctttacacccagtga
DBGET
integrated database retrieval system
