Pan troglodytes (chimpanzee): 463135
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Entry
463135 CDS
T01005
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04014
Ras signaling pathway
ptr04015
Rap1 signaling pathway
ptr04024
cAMP signaling pathway
ptr04520
Adherens junction
ptr04530
Tight junction
ptr04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
463135 (AFDN)
04015 Rap1 signaling pathway
463135 (AFDN)
04024 cAMP signaling pathway
463135 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
463135 (AFDN)
04530 Tight junction
463135 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
463135 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
PDZ_2
ASPP1-2_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
463135
NCBI-ProteinID:
XP_016812121
Ensembl:
ENSPTRG00000018810
VGNC:
14790
LinkDB
All DBs
Position
6:165281663..165427407
Genome browser
AA seq
1921 aa
AA seq
DB search
MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCI
RVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQLNWNK
DDREGRFVLKNENDAIPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ
ASDKDDRPFQGEDVENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRS
SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPKDYCIAR
VMLPPGAQHSDEKGAKEIILDDDECPLQIFREWPSDKGILVFQLKRRPPDHIPKKTKKHL
EGKTPKGKERADGSGYGSTLPPEKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLY
RLQLSVTEVGTEKLDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVEGQRISE
TTMLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLMVKGPRHKPGIVQETTFDLGGD
IHSGTALPTSKSTTRLDSDRVSSASSTAERGMVKPMIRVEQQPDYRRQESRTQDVSGPEL
ILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSNQYRPDISPTER
THKVIAVVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRIT
LDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSL
LRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLGHIEAWAEK
QGLELAADCHLSRIVQATTLLTMDKYAPDDIPNINSTCFKLNSLQLQALLQNYHCAPDEP
FIPTDLIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGL
QEFLDPLCQRGFCRLIPHTRSPGTWTIYFEGADYESHLLRENTELAQPLRKEPEIITVTL
KKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQE
RAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELY
NNSTQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSAYASG
TTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPNY
EEKPHMHTDSNHSSIAIQRVTRSQEELREDKAYQLERHRIEAAMDRKSDSDMWINQSSSL
DSSTSSQEHLNHSSKSVTPASTLTKSGPGRWKTPAAIPATPVAISQPIRTDLPPPPPPPP
VHYAGDFDGMSMDLPLPPPPSTNQIGLPSAQVAAAERKKREEHQRWYEKEKARLEEERER
KRREQERKLGQMRTQSLNPAPFSPLTAQQMKPEKPSTLQRPQETVIRELQPQQQPRTIER
RDLQYITVSKEELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQSKPDRSAE
ESDRLRKLMLEWQFQKRLQESKQKDEDDEEEEEDDVDTMLIMQRLEAERRARQTAMPAIS
VLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRRQEEERTKRDAEEKRRQEEGYYSRL
EAERRRQHDEAARRLLEPEAPGLCRPPLPRDYEPPSPSPAPGAPPPPPQRNASYLKTQVL
SPDSLFTAKFVAYNEEEEEEDCSLAGQDKYSSTRKSHGDLLPAPLKPRPPPCQPRPASDG
IFLSNSFQPPSAKANSTAHEKGQPPPPPKKSSSYHPSHCKGRGPNSYPGSTGAAVGAHDA
CRDAKEKRSKSQDADSPGSSGAPENLTFKERQRLFSQGQDVSNKVKASRKLTELENELNT
K
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcggccgtgacgaggagcggcggaagctggccgacatcatccaccactgg
aacgccaaccggctggacctgttcgagatcagccagccgaccgaggatttggagttccat
ggagtgatgagattttattttcaagataaagctgctggaaactttgcaacaaaatgtatt
cgggtctctagtactgccaccactcaagatgtaatcgaaacgctcgcggagaaatttcga
cctgatatgcgaatgctgtcgtctcccaagtattcactctatgaagtgcatgtcagcgga
gaagaaagaagattggatatagatgagaaacctctagttgtacaactgaattggaacaaa
gatgatcgggaaggcagatttgttcttaagaatgagaatgacgccattcctcctaagaag
gctcaaagtaatggacctgaaaagcaggaaaaagaaggggttatccagaacttcaagaga
actctctcaaagaaagaaaagaaggaaaaaaagaagagagaaaaagaggcattgcgacag
gcatctgataaagatgatagacctttccaaggggaggatgttgaaaattctcgactggct
gctgaggtttacaaagacatgccggaaaccagctttactcgaaccatttctaatcctgag
gtggttatgaaacgacggaggcagcaaaaattggaaaagagaatgcaggaatttcggagc
tcagatgggcggcctgattcaggtggaacattgagaatttatgcagatagtttaaaacca
aatattccctacaagacaatcctgctgtctactacagatcctgcagactttgctgtggct
gaagctttagagaagtatggtctggaaaaagaaaaccctaaggattactgcatcgcccgg
gttatgcttcctcctggagcccagcattctgatgaaaagggtgctaaagaaattattctt
gatgatgatgagtgtcctttacaaatcttcagggaatggccaagtgacaaagggatttta
gtctttcaattgaagaggaggccaccagaccacatcccaaagaaaaccaagaaacacttg
gaaggcaagacacccaagggaaaggagagagctgacgggtctggctatggctccaccctt
cctccggagaagctgccctatttagtagagttaagcccagggagaaggaatcactttgcc
tactacaactatcacacttacgaagatggttctgactctagagataagccaaagctttac
cgccttcagttaagtgttactgaagttgggacagaaaagttggatgacaactctatccag
ttgtttggcccaggaattcagccccatcactgtgaccttaccaacatggatggagtggtc
actgtgacgcccagaagtatggacgcagaaacctacgtggaaggccagcgcatctcagaa
accaccatgctgcagagtggcatgaaagtgcagtttggggcgtcccatgtatttaagttt
gtggaccccagtcaggatcatgctcttgcaaaaagatctgtggatggaggcctgatggtt
aagggcccaagacataaacctggaattgttcaggagacaacttttgatttgggaggagat
attcatagtgggacagcattaccgacaagcaagagcaccactaggctggacagcgacaga
gtgtcgtctgcctctagcacagccgagcggggaatggtgaagccgatgatcagagtagaa
cagcagccagattatcgcaggcaagaaagcagaacacaggatgtttctgggcctgaactg
atactacctgcaagcattgaattcagggaaagttctgaagattcatttttgtctgccatt
ataaattatactaatagctctacagtccactttaagttgtcccctacatatgtattatat
atggcatgccggtatgtattgtccaaccagtacagacctgacatcagccctacagagcgc
acacataaagtcattgcagtcgtcaacaagatggtgagcatgatggagggcgtcatccag
gaagtagaccaggttgaccagaaacagaagaatattgcaggggcacttgccttctggatg
gcaaatgcatctgaacttctcaacttcattaagcaagaccgagaccttagtcggatcaca
ctggatgctcaagatgttttagcacatttggttcaaatggcatttaaatacttggttcac
tgtcttcaatcagaacttaataattacatgccagcctttctagatgaccctgaagagaac
agtctgcaaagaccaaaaatagatgatgtgctgcacacgctcacaggagccatgtccttg
ctacgacgctgcagagtcaatgccgccctgaccatccagctcttctctcagctcttccac
ttcatcaatatgtggctgttcaatagattggtgaccgacccagattcggggctgtgctcc
cattactggggtgcaattatccgtcagcagttgggccatattgaagcctgggctgagaag
caggggctggaactggctgcggactgtcatctgagcaggatcgtgcaggcaacgactttg
cttaccatggataagtatgcacctgatgacattccaaatataaacagcacctgctttaag
ttaaattcactacaacttcaagccttattacagaactatcactgtgcacctgatgagcct
tttatcccaacggatcttatagaaaatgtagtgactgtggctgaaaacactgccgatgag
ctggcccgcagtgatggaagggaagtgcagttggaggaggatcctgatctgcagctgccg
tttcttttgccagaagatggttattcttgtgatgttgtcagaaacattccaaatggttta
caagaatttttagaccctctgtgccagagaggattttgcaggttaattcctcacacacgt
tcaccaggtacttggacaatatattttgaaggtgcagattatgaaagtcaccttctgcgt
gagaacacagagctggctcagcctctgaggaaagaacctgaaataatcactgtgacccta
aaaaagcagaatggaatgggccttagcattgttgcagcaaagggtgctggtcaagataaa
ctaggaatctatgtgaagtcggttgtgaaaggaggtgctgcagatgtggatggacgtcta
gctgcaggtgatcagctcctcagtgtggatggacgaagtctggttggactctctcaggaa
agggcagcagaactcatgacaagaacaagctctgtggtgacactggaagtagcaaagcag
ggtgccatctaccacggtctggccacccttctcaatcagccatcccccatgatgcagaga
atttcagatcgtcgtggctcaggtaaaccccgaccaaagagtgaaggctttgagctctat
aataattcaactcaaaatgggtctcctgagagtcctcagctgccttgggcagaatatagt
gaaccaaagaaattgcctggtgatgacagactgatgaaaaatagagctgatcaccgttcc
agccccaacgtagcaaatcagcctcctagtcctggagggaaaagtgcatatgcctctgga
acaacagcgaagataacatctgtctctactggaaacctctgcactgaggagcagacgcct
ccgcctagacctgaagcctaccccatccccactcagacgtacaccagagagtattttacc
ttcccagcttccaaatcccaggatcggatggctcctcctcagaaccagtggccaaattat
gaggaaaagccgcatatgcacacagatagtaatcattccagtattgcaattcagcgtgtt
acacgttcccaagaagaacttcgagaagataaagcttaccaacttgagcggcatcgaata
gaggcagctatggaccgaaagtctgatagtgatatgtggataaatcagagctcctcactg
gactccagtacctctagccaagagcatctgaaccattcctctaagtcggtcacccctgct
tctacactgaccaaaagtggccctggccgttggaaaacaccagcagccataccggccacc
cctgtggccatctcccagccaatccgaacagacctgcctccgccacccccgccacctcca
gtccactatgccggtgatttcgatggaatgtccatggatttgcctctcccaccaccccct
tccaccaaccagatagggctgccgtctgcacaggtggctgctgccgaacggaaaaagaga
gaagaacatcagcgttggtatgagaaggagaaggcccgcctggaggaggagcgggagagg
aagcggagagagcaggagaggaagttgggccagatgcgcactcagtccttaaaccctgct
ccgttttctcccctgactgcacagcagatgaagcccgaaaagccttccacactccagcgg
ccacaggaaacagtcattcgggagctgcagcctcagcagcagccccgcacgatcgagcgc
agagacttgcagtacatcacagtcagcaaagaggagctttcctcgggggacagtctgtcc
cccgacccgtggaagcgggacgccaaggagaagctggagaagcagcagcagatgcacatc
gtggacatgctgagcaaggagatccaggagctccagagcaaaccggaccgcagcgccgag
gagagcgaccggctgcgcaagctcatgctggagtggcagttccagaagagactccaggag
tcgaagcagaaggacgaagatgacgaggaggaggaggaggacgatgtggacaccatgctg
atcatgcagcgcctggaggctgaacgaagagcgaggcagactgctatgccagcaatctct
gttctagatttgttgcaggacgaggagcggaggcggcagcagcagttagaagagatgcgc
aagcgggaagcggaagaccgagcgaggcaagaggaagagcgccggcggcaggaggaggag
cgaacaaaacgagacgctgaagaaaagaggcgacaggaagaagggtattacagccgcctg
gaagccgagaggcgcagacagcacgacgaggcggcgcgcaggttgctggaacccgaggcg
cccggtctgtgccgccctccgcttccccgggactacgagcccccgtccccgtcccccgcg
cccggcgcccctcctcccccgcctcagcgaaacgcctcctacctcaaaacacaggtcctc
tcccccgactcgctgttcactgccaagtttgttgcatacaatgaggaggaggaggaggag
gactgcagcctagcaggtcaggataagtactccagcacaagaaagtctcatggggacctt
cttcctgcccctcttaaaccacggccacccccctgccagccacgcccggcctccgatggc
atctttctctccaactcattccagccaccctcagccaaagccaacagtactgctcacgaa
aaaggccagcccccgccccctccaaaaaaatccagctcctaccatcccagccactgcaaa
ggtagaggaccaaactcttacccaggatctactggagcagctgttggagcccatgacgcc
tgtcgagatgcaaaagagaagcgctctaaaagccaagatgcagattcacctggaagttct
ggggcccctgaaaacttgacattcaaggaacgccagcgtcttttttcacaaggtcaagat
gtatccaataaagtgaaagcttctcgtaaattaacagaactggagaatgaactgaacaca
aagtga
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integrated database retrieval system