Pan troglodytes (chimpanzee): 463365
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Entry
463365 CDS
T01005
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X2
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04140
Autophagy - animal
ptr04142
Lysosome biogenesis
ptr04148
Efferocytosis
ptr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
463365 (VPS41)
04140 Autophagy - animal
463365 (VPS41)
04148 Efferocytosis
463365 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
463365 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptr04131
]
463365 (VPS41)
Membrane trafficking [BR:
ptr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
463365 (VPS41)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
VPS18_solenoid_2nd
zf_RING_Vps8_fungal
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_THOC3
Vps39_1
Beta-prop_HPS5
WD40_WDHD1_1st
zf_RING_Vps8
Beta-prop_RIG_2nd
TPR_PEP5_VPS11
zf-RING_5
Beta-prop_IFT122_1st
TPR_YpiA
Beta-prop_WDR3_1st
Beta-prop_ACSF4
CFAP251_N
RIG-I_C
Beta-prop_IFT140_2nd
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
463365
NCBI-ProteinID:
XP_009451196
Ensembl:
ENSPTRG00000019104
VGNC:
8787
LinkDB
All DBs
Position
6:complement(44508457..44690119)
Genome browser
AA seq
841 aa
AA seq
DB search
MAEAEEQEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQ
GNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVH
PHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWRGHLIAWANNMGVK
IFDIISKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKVCSVKERHASEMRD
LPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCARPRLDIIQPLSET
CEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKERDQDDHIDWLLEKK
KYEEALMAAEISQKNIKRHKILDIGLAYINHLVERGDYDIAARKCQKILGKNAALWEYEV
YKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLIREWPGDLYNNSVI
VQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIK
DKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYH
EKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMI
MEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEG
MEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGVLVDEENICES
CLSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSAKNRGPGSAILEMK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaggagcaggaagaagagagcgaagaggaacccaagctgaagtatgaa
aggctttccaatggggtaactgaaatacttcagaaggatgcagctagctgcatgacagtc
catgacaagtttttggcattgggcacacattatggcaaggtttatttacttgatgtccaa
gggaacatcactcagaagtttgatgtaagtcctgtgaagataaatcagattagcttggat
gaaagtggagagcacatgggtgtgtgttcagaggatggcaaggtgcaggtatttggactg
tattctggagaagaatttcacgagacttttgactgtcccattaagattattgctgtgcac
ccacatttcgtgagatccagttgcaagcagtttgtgaccggagggaagaagctgctactg
tttgaacggtcttggatgaacagatggaagtctgctgttctgcatgaaggggaagggaac
ataaggagtgtgaagtggagaggccatctgattgcttgggccaataatatgggtgtgaag
atttttgacatcatctcaaagcaaagaatcaccaatgtgccccgggatgatataagtctt
cgcccagacatgtatccctgcagcctctgctggaaggacaatgtgacactgattattggc
tgggggacttctgtcaaggtatgctcagtgaaggaacggcatgccagtgaaatgagggat
ttgccaagtcgatatgttgaaatagtgtctcagtttgaaactgaattctacatcagtgga
cttgcacctctctgtgatcagcttgttgtactttcgtatgtaaaggagatttcagaaaaa
acggaaagagaatactgtgccaggcctagactggacatcatccagccactttctgagact
tgtgaagagatctcttctgatgctttgacagtcagaggctttcaggagaatgaatgtaga
gattatcatttagaatactctgaaggggaatcacttttttacatcgtgagtccgagagat
gtcgtagtggccaaggaacgagaccaagatgatcacattgactggctccttgaaaagaag
aaatatgaagaagcattgatggcagctgaaattagccaaaaaaatattaaaagacataag
attctggatattggcttggcatatataaatcacctggtggagagaggagactatgacata
gcagcacgcaaatgccagaaaattcttgggaaaaatgcagcactctgggaatatgaagtt
tataaatttaaagaaattggacagcttaaggctattagtccttatttgccaagaggtgat
ccagttctgaaaccactcatctatgaaatgatcttacatgaatttttggagagtgattat
gagggttttgccacattgatccgagaatggcctggagatctgtataataattcagtcata
gttcaagcagttcgggatcatttgaagaaagatagtcagaacaagactttacttaaaacc
ctggcagaattgtacacctatgacaagaactatggcaacgctctggaaatatacttaaca
ttaagacataaagacgtttttcagttgatccacaagcataatcttttcagttctatcaag
gataaaattgttttattaatggattttgattcagagaaagctgttgacatgcttttggac
aatgaagataaaatttcaattaaaaaggtagtggaagaattggaagacagaccagagctg
cagcatgtgtatttgcataagcttttcaagcgagaccaccataaggggcagcgttaccat
gaaaaacagatcagtctttatgctgaatatgatcgaccaaacttacttccctttctccga
gacagtacccattgcccacttgaaaaggctcttgagatctgtcaacagagaaactttgta
gaagagacagtttatcttctgagccgaatgggtaatagccgaagtgccctgaagatgatt
atggaggaattacatgatgttgataaagcaatcgaatttgccaaggagcaagatgatgga
gagctgtgggaagatttgattttatattccattgacaaaccaccatttattactggcttg
ttaaacaacattggcacacatgttgacccaattctactgattcaccgtattaaggaagga
atggagatccccaatttgagagattccttggttaaaattctgcaagactacaatttgcaa
attctgcttcgtgaaggctgcaagaagattctcgtagctgactctttgtccttactgaag
aaaatgcaccgaactcaaatgaaaggtgttcttgttgatgaggagaacatctgtgagtcg
tgcctttcccctattcttccatcagatgcagctaagcccttcagcgtggtggtcttccat
tgccggcacatgttccacaaggagtgtctgcccatgcccagcatgaactctgctgcacag
ttctgcaacatctgcagtgctaagaaccgtggaccaggaagtgccattttggagatgaaa
aaatag
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integrated database retrieval system
