Pan troglodytes (chimpanzee): 463538
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Entry
463538 CDS
T01005
Symbol
VPS50
Name
(RefSeq) syndetin isoform X2
KO
K23288
syndetin
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptr04131
]
463538 (VPS50)
Membrane trafficking [BR:
ptr04131
]
Protein recycling
Others
EARP complex
463538 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
463538
NCBI-ProteinID:
XP_009451897
Ensembl:
ENSPTRG00000019403
VGNC:
8788
LinkDB
All DBs
Position
6:102608817..102736504
Genome browser
AA seq
941 aa
AA seq
DB search
MQKIKSLMTRQEEFRELREQPSDPQAEQELINSIEQVYFSADSFDIVKYELEKLPPVLNL
QELEAYRDKLKQQQAAVSKKVADLILEKQPAYVKELERVTSLQTGLQLAAVICTNGRRHL
NIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLC
LECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLL
GKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHVTPDSYIP
CLADLCKALWEVMLSYYRTMEWHEKHDNEVTASVSEGSNMIGTEETNFDRGYIKKKLEHG
LTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISRLMQVGEEFCGSKSEVLQESIRK
QSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSILQLHEFKFMEQSRSPSVSPSKQP
VSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLASNGYESDEQEKSAYQEYDSDSDV
PEELKRDYVDEQTGDVPVKSVSRETLKSRKKSDYSLNKVNAPILTNTTLNVIRLVGKYMQ
MMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLESTGLGLSSSRLRTTLNRIQESL
IDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGDTLYGLAERVVATESLVFLAEQF
EFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIYWIVAGKALDYEQMLLLMANVKW
DVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIPLPVSNILWEHCIRLANRTIVEGY
ANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKE
HREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctcatgacccgacaggaagaattcagggaacttcgagaacag
ccaagtgaccctcaagctgaacaagagcttattaatagtattgaacaagtatatttttct
gcggattcatttgatattgttaaatatgagctggagaagcttccacctgttctcaatttg
caagaattagaggcgtatagagacaaattgaaacaacagcaagctgcagtatctaaaaaa
gtggcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaaagagttacc
tcattgcagacaggtcttcaattagctgctgttatctgtacaaatgggagaagacacttg
aatattgcaaaggaaggttttactcaagctagtttaggccttcttgcaaatcaaaggaaa
cgtcagttgctgattggacttctgaaatctctgagaactataaaaacattgcaaagaaca
gatgtacggttaagtgaaatgctggaggaggaagattatccaggagctattcagttgtgc
cttgaatgtcaaaaagctgccagcacttttaaacattacagttgtataagtgaactgaat
tcaaagctgcaagatactttggaacagattgaggaacagctggacgtagctctttccaaa
atctgcaagaattttgacattaaccattataccaaggttcaacaagcttatcgacttctt
ggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagccattcacaac
accgtgtttcaagttgttcttggttatgtggaactatgtgcaggaaacacagacacaaaa
ttccaaaagctgcaatataaggatctctgtacacatgttacaccagacagctatattcca
tgccttgcagacctgtgcaaagcactatgggaagttatgctcagctattataggactatg
gaatggcatgaaaaacatgacaatgaggttactgcttcagtttctgaagggagtaatatg
ataggtactgaagaaactaattttgatcgtggctacataaaaaagaaattagaacatgga
cttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgcttggaactgat
ttgtctatattcaaatatgatgatttcatctttgttttggatataatcagcaggttgatg
caagttggagaagaattttgtggtagcaagtctgaagttttacaggaatctattagaaaa
caaagtgtcaattatttcaagaattaccatagaacacggctcgatgaactgagaatgttc
ttagagaatgagacttgggaactttgtcctgttaagtcaaatttcagcatcttgcaactt
catgaatttaaattcatggaacagtctcgctccccatcagtttcacctagtaaacagcca
gtctcaacttcttcaaaaacagtgaccttgtttgagcagtactgtagtggtgggaatccg
tttgaaattcaggccaaccacaaagatgaagaaacagaagatgtcttagcttctaatggg
tatgaatctgatgaacaagaaaagagtgcctatcaagagtatgacagtgacagtgatgtt
cctgaggaactcaaacgagactatgtggatgagcagacaggagatgttcctgtgaaaagt
gtttctcgggaaactctaaaaagcaggaagaaatcagattacagtctaaataaagtgaat
gcacctatcttaacaaatacaacattgaatgtcataagacttgttggaaaatatatgcag
atgatgaacattcttaagccaattgcctttgatgttattcatttcatgtctcaactattt
gattattacttgtatgcaatatataccttttttggtcggaatgattcattggaatcaact
ggactcggccttagtagtagtagactaagaacaactctaaacagaatacaagaaagcctt
attgatctagaagtttcagctgatcctactgccacactcacagcagcagaagaaagaaag
gagaaggtgccaagtccacacctcagtcacctagtggttttgacatctggggatacgttg
tatgggttggcagaaagagtggtagccacggaatccttggtattcttggctgaacagttt
gagttccttcagccacatctggatgctgtgatgcctgcagtcaaaaagccctttcttcag
cagttctattctcagacagtctcaaccgccagtgaactacggaaaccaatttactggatt
gtagctggtaaagcccttgattatgaacagatgctgcttctcatggctaatgtgaaatgg
gatgtaaaagaaattatgtcacagcacaacatatatgtagatgcactattaaaggaattt
gagcagtttaacaggaggctaaatgaagtttctaagagagttcgcatacccttgcctgtg
tctaatatactttgggaacattgtatacgattggctaatcgaactattgtagaaggatac
gccaatgtcaagaaatgcagtaatgagggtcgtgccctgatgcaattggattttcaacag
tttttaatgaaacttgaaaaactaacagatattagacccattcctgataaagaatttgta
gaaacttatattaaagcttattacctaactgagaatgacatggaacgctggatcaaagag
cacagggaatattcaacgaagcagctgaccaatctggtgaatgtttgcctgggatcccat
atcaataagaaagcaagacaaaaacttctagcagctatagatgatatagacagacctaaa
agataa
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