Pan troglodytes (chimpanzee): 464601
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Entry
464601 CDS
T01005
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X2
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03013
Nucleocytoplasmic transport
ptr03015
mRNA surveillance pathway
ptr03040
Spliceosome
ptr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
464601 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
464601 (NCBP1)
03015 mRNA surveillance pathway
464601 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
464601 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
464601 (NCBP1)
03041 Spliceosome [BR:
ptr03041
]
464601 (NCBP1)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
464601 (NCBP1)
Spliceosome [BR:
ptr03041
]
Common components
Common spliceosomal components
Cap binding complex
464601 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
464601
NCBI-ProteinID:
XP_024201555
Ensembl:
ENSPTRG00000021167
VGNC:
4797
LinkDB
All DBs
Position
11:complement(40837497..40877743)
Genome browser
AA seq
723 aa
AA seq
DB search
MQKIYESSARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYL
VRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWVGKELYEK
KDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLKKDRWQER
HILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGPVMPGSH
SVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELFQLPAPPH
IDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHLSNFQFR
WSWEDWSDCLSQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPANPTCIYKY
GDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFNPLKIEVF
VQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDK
MIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLA
RQHKRRSDDDDRSSDRKDGVLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVR
CETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFCA
LQA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatttatgaatccagtgcacgcctattacctgagaagctgacaatttataca
acattagttggactactgaatgccaggaattacaattttggtggagaatttgtagaagcc
atgattcgtcaacttaaagaatcattgaaagcaaacaattataatgaagccgtgtatttg
gtccgttttttatctgatcttgtgaattgtcatgtgattgccgccccatcaatggttgct
atgtttgaaaattttgtaagcgtaactcaggaagaagatgtacctcaggtgcgacgagat
tggtatgtgtatgcatttctgtcatctttgccctgggttggaaaggagttgtacgaaaag
aaagatgcagagatggaccgcatctttgccaacactgaaagctatcttaaaagacgccaa
aagactcatgtacccatgttacaggtatggactgctgataaaccacatccacaagaagag
tatttagattgcctgtgggcccagattcagaaattgaaaaaggatcgctggcaggaacgg
cacatcctaagaccttatcttgcctttgacagcatcctgtgtgaagcactgcagcacaat
ctgcctccttttacaccacctcctcacactgaagattcagtgtacccaatgcccagggtc
atcttcagaatgtttgattacacagatgatcccgagggtcctgtcatgccagggagtcat
tcagtggaaagatttgtaatagaagagaatcttcactgcatcattaagtcccactggaag
gaaaggaagacttgtgctgcacagttagtgagctatccagggaagaacaagatccccttg
aactaccacatagttgaggtgatctttgcagagctgtttcaacttccagcaccccctcac
attgatgtgatgtacacaacactcctcattgaactgtgcaaacttcaacctggctctcta
ccccaagttcttgcacaggcaactgaaatgctatacatgcgtttggacacaatgaacact
acctgtgtagacaggtttattaattggttttctcatcatctaagtaacttccagttccgt
tggagctgggaagattggtcagattgtcttagtcaagatcctgaaagtcccaaaccaaag
tttgtaagagaagttctagaaaaatgtatgaggttgtcttaccatcagcgtatattagat
attgttcctcctaccttctcagctctatgtcctgcaaacccaacctgcatttacaagtat
ggagatgaaagtagcaattctcttcctggacattctgttgccctctgtttagctgttgcc
tttaaaagtaaggcaaccaatgatgaaatcttcagcattctgaaagatgtaccaaatcct
aaccaggatgatgacgacgatgaaggattcagttttaacccattgaaaatagaagtcttt
gtacagactctgctacacttggcagccaaatcattcagccactccttcagtgctcttgca
aagtttcatgaagtcttcaaaaccctagctgaaagtgatgaaggaaagttacatgtgcta
agagttatgtttgaggtctggaggaaccatccacagatgattgctgtactagtggataag
atgattcgtacacaaatagttgattgtgctgccgtagcaaattggatcttctcttcagaa
ctatctcgtgactttaccagattgtttgtttgggaaattttgcactctacaattcgtaag
atgaacaaacatgtcctgaagatccagaaagagctggaagaagctaaagagaaacttgct
aggcaacacaaacggcgaagtgatgatgatgacagaagcagtgacaggaaagacggggtt
cttgaggaacaaatagaacgacttcaggaaaaagtggaatctgctcagagtgaacaaaag
aatcttttcctcgttatatttcagcggtttatcatgatcttgaccgagcacctagtacga
tgcgaaactgatgggaccagtgtattaacaccatggtataagaactgtatagagaggctg
cagcagatcttcctacagcatcaccaaataatccagcagtacatggtgaccctggagaac
cttctcttcactgctgaattagaccctcatatcttggccgtgttccagcagttctgtgcc
ctgcaggcctaa
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