| Entry |
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| Symbol |
SHOC1
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| Name |
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
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| KO |
| K28108 | shortage in chiasmata 1 |
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| Organism |
ptr Pan troglodytes (chimpanzee)
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| Brite |
KEGG Orthology (KO) [BR:ptr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:ptr03036]
464659 (SHOC1)
Chromosome and associated proteins [BR:ptr03036]
Eukaryotic type
Meiosis-specific proteins
Others
464659 (SHOC1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
11:26683873..26792723
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| AA seq |
1508 aa
MFSALKYHAIDYLYENVVRKKFYRDALLLRIPSCLYQDESYHVAVTDNKFRRPWTRVSAV
SVPGMTDTSVLDQWKASFFVEDFLEKKTITRMVTQINCEFEEVVPSSNPDSQIEVEEVSL
YTHMDYNEVFTPVSCLEKCSALQNQNQDLFIDDKGILFVSNRKHLPTLPTLLSRLKLFLV
KDPLLDFKGQIFTEANFSRECFSLQETLEAFVKEDFCMDKVNFCQEKLEDTICLNKPSSF
LIEYEFLIPPSLKPEIDIPSLSELKELLNPVPEIINYVDEKEKLFERDLTNKHGIEDIGD
IKFSSTEILTIQSQSEPEECSKPGELEMPLTPLFLKCQHSSVNSLRTELQTFPLSPVCKI
NLLTAEESANEYYMMWQLERCRSPLNPFLLTVPRIQEPHSQYSVTDLKKIFSVKEESLVI
NPEKAEWWKQAGLNLKMMETLEHLNTYLCHDNLSSNDTKIEIFLPTKVLQLESCLEHKSR
SSPIALIDEKSTNAHLSLPQKSPSLAKEVPDLCFSDDYFSDKGAAKEEKPKNHQEPVNRI
IQKKENNDHFELDCTGPSIKLPSSSIIKKASFEHGKKQENDLDLLNDFIMLRNKYKTCTS
KTEVTNSDEKHDKEACSLTLQEESPIAHINKTLEEINQERGTDNVIEIQASDSQCQAFCL
LEAAASPILKNLVSLCTLPTANWKFATVIFDQTRFLLKEQEKVVSDAVHQGTIDEREMTF
KHAALLHLLVTIRDVLLTCSLDTALGYLSKAKDIYNSILGPYLGDIWRQLEIVQFIRGKK
PETNYKIQELQCQILSWMQSQQQIKVLIIIRMDSDGEKHFLIKILNKIEGLTLTVLHSNE
RKDFLESEGVLKGISSCVVVHNQYIGADFPWSKFSFVVEYNYVEDSCWTKHCKELNIPYT
AFKVILPDTVLERSTLLDRFGGFLLEIQIPYVFFASEGLLNTPDILQLLESNYNISLVER
GCSESLKLFGSSERYVVVTIDEHTAIILQDLEELNCEKASDNIIMRLMALSLQYRYCWII
LYTKETLNSEYPLTEKTLHHLALIYAALVSFGLNSEELDVKLIIAPGVEATALIIRQIAD
HSLMTSKRDPHEWLDKSWLKVSPSEEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLC
QLQELLPEVPEKVLKHFCSITSLFKIGSSSITKSPQISSPQENRNQISTLSSQSSASDLD
SVIQEHNEYYQYLGLGETVQEDKTTTLNDNSSIMELKEISSFLPPVTSYNQTSYWKDSSC
KPNIGQNTPFLINIESRRPAYNSFLNHSDSESDVFSLGLTQMNCETIKSPTDTQKRVSVV
PRFINSQKRRTHEAKGFINKDVSDPIFSLEGTQSPLHWNFKENIWEQENHPFNLQYGAQQ
TACNKLYSQKGNLFTDQEKCLSDESEGLTCESSKDETFWRELPSVPSLDLFRASDSNANQ
KEFNSLYFYQRAGKSLGQKRHHESSFNSGDKESLTGFMYSQLPQFKKRRLAYEKVPGRVD
GQTRLRFF |
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| NT seq |
4527 nt +upstreamnt +downstreamnt
atgttttcagcattgaaatatcatgcaatagactatttatatgagaatgtggttagaaag
aagttttacagagatgctttattgcttcgaatcccttcatgtttatatcaagatgaaagt
taccatgtagcagttactgataataaatttaggaggccatggacaagagtctcagctgtt
tcagttccaggaatgacagatacctcagtcttggaccaatggaaagcaagtttctttgtg
gaggatttccttgagaaaaaaacaattacaagaatggtgacccagattaattgtgaattt
gaggaagttgttccaagttcaaatccagactcccaaattgaagtagaggaggtcagttta
tacacccacatggactacaatgaagtctttacccctgtcagttgtttagaaaaatgttca
gcacttcaaaaccagaaccaagatttatttattgatgataaaggaatactttttgtaagt
aatagaaaacacctaccaactttgcctactctcttgagtagactaaaactgtttttggta
aaggatcctcttttagatttcaaaggacagatcttcacagaagctaatttttccagggaa
tgtttctctcttcaagaaactttggaagcttttgtgaaagaagatttttgtatggataaa
gtgaacttttgtcaagagaaactagaagatacaatatgtttaaataagccgtcaagtttt
cttattgagtatgaattcttaatacctccaagcctcaaaccagaaattgatattccatca
ctctcagaactgaaggagttattaaacccagtgccagaaataataaactatgtagatgaa
aaggaaaagctttttgaaagagatcttactaacaagcatggaattgaggatatcggggat
ataaaattcagctccacagagattttgaccattcaaagccagagtgaaccagaagagtgc
agtaaaccaggagagttagaaatgccactaactcctctattcctaaaatgccaacattct
tcagtgaattcattacgtacagaacttcagacatttccattatctccggtttgtaaaatt
aatttgcttactgctgaagaatcagctaatgaatactacatgatgtggcaattagaaaga
tgtagaagccctttgaacccatttttgcttacagtgccaagaattcaagagccccacagc
caatattcagttacagatttgaaaaagatattttctgttaaagaagaaagccttgtgatt
aatccggaaaaggcagagtggtggaaacaagcaggactaaatctgaaaatgatggaaaca
ttggaacatctgaatacatatttatgtcatgataatttgtcttctaatgacactaaaatt
gagatatttttgcctacgaaagtgcttcaattagaatcatgtctagaacataaaagtcgt
tcttcacctattgcacttattgatgaaaaatctacaaatgctcatttatcacttccacaa
aagagtccatctctggcaaaagaagtaccagatctatgtttttctgatgactatttctct
gataaaggagcagcaaaagaagaaaaaccaaagaatcaccaagaaccagtaaacagaata
atccaaaagaaagaaaataacgatcactttgaacttgactgcacaggaccatctattaaa
ttaccttcctcttcaataattaaaaaagcatcttttgaacatggcaaaaaacaagagaat
gatttggaccttttgaatgactttattatgctgcgaaataaatataagacttgcacctca
aagactgaagtcacaaacagtgatgaaaaacatgataaagaagcatgttctttgacactt
caagaagaaagtcctattgctcatattaataaaaccctggaggaaataaatcaggaaagg
ggaacagataatgtcattgaaattcaagcgtcagatagccagtgccaagcattttgcctc
ctcgaagcagcagcttctcctatcttaaaaaatcttgtatccttgtgtaccctccctact
gctaattggaaatttgccactgttatttttgaccaaacaaggtttctcttaaaggaacaa
gaaaaagtagtaagtgatgctgttcaccaaggtacaattgatgaaagagaaatgactttc
aagcatgccgctctcttacatcttctggtaacaattagagatgtccttttaacatgcagc
ttggacacagcattgggatatttgtcgaaggcaaaagatatctacaacagcattttaggc
ccctatttgggtgacatttggagacagctggagattgtacagtttattagggggaaaaag
cctgaaaccaactacaagatacaagaattgcaatgtcagatactaagttggatgcaaagt
caacagcaaattaaggtactgattataataagaatggactcagatggtgaaaaacatttt
ctcattaaaattcttaacaaaatagaaggtttaacactgactgtccttcattcaaatgaa
agaaaagattttctggaatctgaaggtgttttaaagggtataagttcctgtgtagttgta
cataatcaatatattggagcagatttcccctggagtaagttctcatttgtggtggaatac
aattatgtggaagactcttgttggactaaacactgcaaagagttgaatattccttacacg
gcctttaaagtgattcttccagacacagttttagaaagaagcaccttgctggatagattt
ggaggttttcttttggaaattcagattccatatgtgttttttgcatctgaaggacttctt
aatactccagacatacttcagctgctagaatccaactataacatctcactagtagagaga
ggctgcagtgagtcattgaaactctttggaagttcagagcgttatgtagtggtgacaatt
gatgaacacactgccataattttgcaggatctagaagaattgaattgtgagaaggcatca
gacaatatcattatgaggctgatggcattatcattacagtacagatattgttggataatt
ttatataccaaagaaacattaaattcagagtatccgcttacagaaaagacacttcatcac
ctagcactgatttatgcagctttggtttcatttgggctaaactctgaagaactggatgta
aagcttataattgccccaggagtagaagcaactgccttgataattcgacaaattgctgac
cacagtttaatgacctcaaagagagatcctcatgaatggttggataaatcctggcttaaa
gtttcaccatctgaggaagaaatgtacttacttgattttccatgtattaacccattggtg
gctcagctcatgctaaataaaggaccttcactgcattggatattattagcaactctgtgt
caacttcaggaactcctacctgaagtcccagaaaaagtgttaaagcatttttgtagcatc
acttccctattcaagattggttcttcttccataacaaaatcaccgcaaatttcgtcacct
caggaaaataggaatcagattagtaccttgtcttctcaaagttcagcttctgatttagac
tctgtcattcaagaacataatgaatattatcagtatttaggattaggagagacagtgcag
gaagacaaaaccaccactttgaatgacaactcttccattatggaactaaaagaaatctca
agttttttaccacctgtgacttcatacaatcagaccagctactggaaagactccagctgt
aaacctaatatagggcagaatactccttttctaattaatatagaatcaaggagaccggct
tataactcctttctaaaccacagtgattcagagtcagatgtcttttctttgggtctaaca
caaatgaactgtgagactataaaatcaccaactgacactcagaagagagtgtcagttgtc
ccccgttttataaattctcagaaaaggagaacacatgaagcaaaaggtttcataaataaa
gatgtatcggaccctatcttttcactagagggcactcaatctcctcttcattggaacttt
aaggaaaatatatgggaacaagagaatcacccgttcaacttacaatatggtgcacagcag
actgcatgtaacaaattgtactctcagaaaggtaatttattcactgatcaggaaaaatgt
ctatcagatgagtctgaaggcctcacatgtgaaagttcaaaagatgagactttctggaga
gaattaccatctgtccccagtttggatttatttcgtgcttctgattctaatgcaaatcaa
aaagaattcaacagcctttatttctaccaaagagctggaaaaagtttaggacagaaaagg
caccatgaatcttcatttaactcaggagacaaggaatcattaacaggttttatgtactca
caactaccacaattcaaaaaacgacgtctagcatatgaaaaagtccctggtagagttgat
gggcagactcggctgaggtttttttga |
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