Pan troglodytes (chimpanzee): 464715
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Entry
464715 CDS
T01005
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
464715 (RC3H2)
04121 Ubiquitin system [BR:
ptr04121
]
464715 (RC3H2)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
464715 (RC3H2)
Ubiquitin system [BR:
ptr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
464715 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
464715
NCBI-ProteinID:
XP_009455520
Ensembl:
ENSPTRG00000021339
VGNC:
13952
UniProt:
K7DTF4
LinkDB
All DBs
Position
11:15547366..15603878
Genome browser
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGSKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVSQLISRSTDSTLRALETVKKVGKVGTNGQNAAGPSAD
SVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPQKSSPFLTRVPVYPPHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPD
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRADFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYVERDRFIVTDLSGHRKHSSTGDLLSLELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGESDYTEDATDTKPDRDIELELSALDTDEPDGQSEPIEEILDI
QLGISSQNDQLLNGAAVENGHPVQQHQKEPPKQKKQSLGEDHVILEEQKTILPVTSCFSQ
PLPVSISNASCLPITTSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcatcgaaaagcttgtccttttgaccagactgccatcaacacagat
attgatgtacttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcagtcaattaagttaagtaatctaggtgagaataaacactatgaggttgcaaagaaa
tgcgttgaggatttggcactctacttaaaaccactaagtggaagtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgacacttgtaaactgt
caactggtggaggaggaaggtcgtgtaagagccatgcgagcagctcgttcccttggagaa
agaactgtaacagaactgatattacagcaccagaaccctcagcagttgtctgccaatcta
tgggccgctgtcagggctcgaggatgccagtttttagggccagctatgcaagaagaggcc
ttgaagctggtgttactggcattagaagatggttctgccctctcaaggaaagttctggta
ctttttgttgtgcagagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttaccaaaagagatgaagac
tcttccctaatgcagctgaaggaagaatttcggagttatgaagcattacgcagagaacat
gatgcccaaattgttcatattgccatggaagcaggactccgtatttcacctgaacagtgg
tcctctcttttgtatggtgatttggctcataaatcacacatgcagtctatcattgataag
ctacagtctccagagtcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccctaatccagatgctgtttcaccaacttgggagcagctggaaaatgcaatggtagct
gttaaaacagtagttcatggccttgtggacttcatacaaaattatagtagaaaaggccat
gagacccctcagcctcagccaaacagcaaatacaagactagcatgtgccgagatttgcga
cagcaagggggttgtccacgaggaacaaattgtacatttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgccactgtaagaacgtttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacagggaaaattgttccaagtacaaacggaatttcaaatgcagaa
aacagtgtttcccagctaatctcacgtagtactgacagtaccttaagagctctggagacc
gtgaagaaagtgggaaaggttggcactaatggtcagaatgctgctgggccctctgcagat
tctgtaactgaaaataaaattggttctccacccaagactcctgtaagtaatgtagcagct
acctcagctgggccctctaatgttggaacagagctgaattctgtgcctcaaaaatccagc
ccatttctaactagagtaccagtatatcctccgcattctgaaaacattcagtattttcaa
gatccaaggactcagataccctttgaagtcccacagtacccacagacaggatactatcca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagagtcctccctcccacctgcttccatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccagcctcctcctccgcagccgtat
ggaccagttcctccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcatctgtctatcagacatctttgcgggaaagatataactcattagat
ggatattattcggtggcttgtcagccaccaagtgagccaaggacaactgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagat
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacaccaccttctcctctgttcagtgtagactttcgtgcggatttctca
gagagtgtgagtggtacaaaattcgaagaagatcatctttcccattattctccctggtct
tgtggcaccataggctcctgtataaatgctattgattcagagcccaaagatgtaattgct
aattcaaatgctgtgttaatggacctggacagtggtgatgttaagagaagagtacattta
tttgaaacccagagaaggacaaaagaagaagatccaataattccctttagtgatggaccc
atcatctcaaaatggggtgcgatttccagatcttcccgtacaggttaccataccacagat
cctgtccaggccactgcttcccaaggaagtgcgactaagcccatcagtgtatcagattat
gtcccttatgtcaatgctgttgattcaaggtggagttcatatggcaacgaggccacatca
tcagcacactacgttgaaagggacagattcattgttactgatttatctggtcatagaaag
cattccagtactggggaccttttgagccttgaacttcagcaggccaagagcaactcatta
cttcttcagagagaggccaatgctttggccatgcaacagaagtggaattccctggatgaa
ggccgtcaccttaccttaaaccttttaagcaaggaaattgaactaagaaatggagagagt
gattatacagaagatgcaacagatactaaacctgatagggatatcgagttagagctttca
gcacttgatactgatgaacctgatggacaaagtgaaccaattgaagagatcttggacata
cagcttggtatcagttctcaaaatgatcagttgctaaatggagcggcagtggaaaatggg
catccagtacagcagcaccaaaaggagccaccaaagcagaagaaacagagtttaggtgaa
gaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagccag
ccactcccagtgtctattagcaatgcaagttgcctccccatcaccacatctgtcagtgtt
ggcaacctcattctgaaaactcatgttatgtctgaagataaaaacgactttttaaaacct
gttgcaaatgggaagatggttaacagctga
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integrated database retrieval system
