Pan troglodytes (chimpanzee): 464912
Help
Entry
464912 CDS
T01005
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03013
Nucleocytoplasmic transport
ptr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
464912 (NUP188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
464912 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
464912 (NUP188)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
464912 (NUP188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
HEAT_SCC3-SA
Gar1
Motif
Other DBs
NCBI-GeneID:
464912
NCBI-ProteinID:
XP_009455732
Ensembl:
ENSPTRG00000021445
ENSPTRG00000050851
VGNC:
4814
LinkDB
All DBs
Position
11:complement(9454187..9511403)
Genome browser
AA seq
1764 aa
AA seq
DB search
MASGGGVRARGRAKMAAAAGGPCVRSSRELWTILLGRSALRELSQIEAELNKHWRRLLEG
LSYYKPPSPSSAEKVKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRD
SVKTVLQDERQSQALILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLE
KELVSKYRQQFEELYKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFE
MAPSDLFVLTKMFKEQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCA
LDDRRELHQFAQDGLICQDMDCLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIG
GTAIQLNVFQYLTRLLQSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDT
ACEVLADPSLPELFWGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYS
FLDKMSFYNELYKHKPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDR
AYLVRWEYSYSSWTLFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCL
LPITSRIYMLLQRLTTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPV
SSLSQMISAEGMNAGGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPC
VMFVLKEMLPSYHKWRYNSHGVREQIGCLILELIHAILNLCHETDLHSSHTPSLQSLCIC
SLAYTEAGQTVINIMGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIR
LKPPSNVVSPLEQALSQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSV
YACLGNDAAAIRDAFLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSD
GSKEFSLGMWSCLHAVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTK
PKFWENLTSPLFGTLSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKF
SIEKRFAYWSGYVKSLAVHVAETEGSSCTSLLEYQMLVSAWRMLLIIATTHADIMHLTDS
VVRRQLFLDVLDGTKALLLVPASVNCLRLGSMKCTLLLILLRQWKRELGSVDEILGPLTE
ILEGVLQADQQLMEKTKAKVFSAFITVLQMKEMKVSDIPQYSQLVLNVCETLQEEVIALF
DQTRHSLALGSATEDKDSMETDDCSRSRHRDQRDGQVCVLGLHLAKELCEVDEDGDSWLQ
VTRRLPILPTLLTTLEVSLRMKQNLHFTEATLHLLLTLARTQQGATAVAGAGITQSICLP
LLSVYQLSTNGTAQTPSASRKSLDAPSWPGVYRLSMSLMEQLLKTLRYNFLTEALDFVGV
HQERTLQCLNAVRTVQSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDIQVNLGYLC
QACTSLLHSRKMLQHYLQNKNGDGLPSAVAQRVQRPPSAASAAPSSSKQPAADTEASEQR
ALHTVQYGLLKILSRTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAP
SFGTLLATVNVALNMLGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMEHCFYLLISQ
AMRYLRDPAVHPRDKQRMKQELSSELSTLLSSLSRYFRRGAPSSPATGVLPSPQGKSTSL
SKASPESQEPLIQLVQAFVRHMQR
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgggggcggggtcagggcgcgcgggcgcgcgaagatggcggcggccgccggc
gggccgtgtgtgaggagcagtagagaactgtggactattctgcttggaaggtcagctctg
agagagctgagtcagattgaggcagaactgaataaacattggcggcgattgttagagggg
ctttcttactacaaacctcccagtccaagttcagctgaaaaagtgaaagctaataaagat
gtagcttcaccattgaaggaactgggtttaagaatcagcaagtttttgggtcttgatgaa
gaacagagtgtgcagttactccagtgttacctgcaagaggactacaggggtactcgggac
tcagtaaagacagtactgcaagatgagaggcagagccaggccttaatcctgaagattgca
gattattattatgaagaaagaacctgtattcttcgttgtgtcttacaccttctcacttac
ttccaagatgaaagacacccctatagggttgaatatgcagactgtgttgataaattggag
aaggaactagtttcaaaatacagacagcaattcgaagagctttataaaactgaagcacca
acttgggagacacatggaaatctcatgacagagcgccaagtgtctcgctggtttgttcag
tgccttcgggaacagtccatgctgctagaaattattttcctttattatgcatactttgag
atggcacccagtgacttatttgtattaaccaagatgtttaaagagcaaggatttggtagt
aggcagaccaataggcacctggtggatgagactatggatccttttgtagatcggattggc
tacttcagtgccctcatcctggtggagggcatggatattgagtccttgcataagtgtgct
ttggatgacagaagagaactgcatcagtttgcgcaggatgggcttatttgtcaggatatg
gactgtttaatgttgacctttggggacattccacatcatgccccagtgcttttggcctgg
gctctcctccgtcacactctgaacccagaagagacaagcagtgtggtccggaagataggt
ggcacagccatccagctgaatgtgtttcagtacttgacccgattgctccagtcccttgcc
agtgggggaaatgattgcaccaccagcactgcatgcatgtgtgtctatggactgctctct
ttcgttctgacctcgttggagctgcacaccctgggcaatcagcaggatataattgataca
gcatgtgaagtattggccgacccttctcttccggaactgttctggggaacagagccaact
tctggccttgggatcattctggacagtgtgtgtggaatgtttccccaccttctctcccca
ctcctgcaactgctccgagccctggtatcagggaagtccacagccaaaaaggtgtatagc
ttcttggataagatgtctttctacaatgaactttataaacacaagcctcatgatgtgatc
tcccatgaagatggaactctttggcggagacaaacacccaaactcctttatccccttggg
ggtcaaaccaaccttcgcatacctcaaggcactgtgggccaagtaatgttggatgatagg
gcatatctggtacgctgggaatactcctatagcagctggaccctctttacctgcgagatt
gaaatgttgcttcatgttgtttcaactgcagatgtgattcagcactgccagcgagtcaaa
cccatcattgatctcgtccataaggtcatcagtacagacctgtcgatagcagactgtctc
ctgcccatcacatctcgcatctacatgctgctgcagcggttaacgacagtgatctcccca
cctgtggatgtcattgcttcttgtgtcaactgcttaactgttttggctgcccgcaatcca
gcaaaggtctggactgatcttcgtcacacaggttttttaccatttgtggcccatcctgtc
tccagcctgagtcagatgattagtgcggaagggatgaatgctggagggtacggaaacctc
ttgatgaatagtgaacagcctcagggcgagtatggggttactattgcctttctgcgcttg
atcaccacccttgtcaaggggcaacttggtagtacccagagccaaggacttgtaccctgt
gtaatgtttgtgctgaaggagatgcttcccagctaccataagtggcgctacaactctcat
ggagtgagggaacagattggttgcctgatcttggagctgattcatgcaatactgaacctg
tgccacgagacagacctgcacagcagtcatactcccagcctgcagtctctctgcatctgc
agcctggcatacacagaagcaggacagacagttatcaatatcatgggcattggcgtggac
accattgacatggtgatggctgctcagcctcgaagtgatggggcagagggccaggggcag
ggccagctgctgatcaagacagtgaaactggcattctccgtcaccaacaatgttattcgg
ctgaaacctccttctaatgtggtgtcccccctggaacaggctctctcacaacatggtgct
catggaaacaacctcattgctgttctagccaaatacatctaccacaaacatgaccctgct
ttgccacgtcttgccattcagctgctgaaacgtctggccacggtggccccaatgtcagtg
tatgcttgtctgggcaatgatgcggctgccattcgtgatgccttcctgacccgattgcag
agcaaaattgaggacatgcgcatcaaagtcatgattctagagttcctcacggttgcagta
gagacccagccaggcctcatcgaactgtttctgaacctggaagttaaggatggcagtgat
ggctcaaaggaattcagccttgggatgtggagctgtctccatgcagtgctggagctgatt
gattcccaacagcaagatcggtactggtgcccacccctgctgcatcgtgccgccattgcc
tttttgcatgctctgtggcaggatcggagggacagtgccatgctggtcctccgaaccaaa
cccaagttttgggaaaatttaaccagtccactgtttggaaccctttctcctccctctgaa
acatcagagcccagcatcctggaaacctgtgccctaatcatgaagataatttgcttggag
atatactatgtagtaaagggttcattagaccagtcattaaaggatacactgaagaaattt
tccatcgagaaacgctttgcctactggtcagggtatgtcaagtcattggcagttcacgtg
gccgaaacagaaggcagcagctgcacctccttgttagagtaccagatgctggtgtccgcc
tggaggatgcttctcatcattgccaccactcatgcagatataatgcacctgactgactct
gtggtgcgtcgccagctctttcttgacgtgcttgatggaaccaaagcgttactcctagtt
ccagcctcagtgaattgccttcgcctcggctccatgaagtgcactctgctgcttatcctc
ctccggcagtggaagagagagttaggttctgtggatgaaatccttggacccttgacggag
atcctggagggagtgctgcaggccgaccagcaactcatggagaagaccaaggccaaggtg
ttctcggcattcatcacagtgttgcaaatgaaggagatgaaagtaagtgacatcccccag
tactcccagctggtgctgaatgtctgtgagaccctccaagaggaagtgattgcactcttc
gaccagacccgccacagtctggcattaggcagtgccacagaggacaaggacagcatggag
actgacgactgttctcggtcccggcacagggaccagcgtgatgggcaggtgtgtgtcctg
ggcctgcacctggccaaggagctgtgtgaggtagacgaggatggtgactcctggctgcag
gtaacccgcaggcttcccatcctacccaccctcctcaccactctagaggtgagccttcgc
atgaagcagaacctacatttcactgaggccacattgcatctgctcctcaccctggctcgc
actcagcagggagccacagcagtggctggagctggcattacccagagcatttgtttgccc
cttctgagtgtgtaccagcttagcaccaacggcacagcacagacacctagtgcctctcgg
aagtccctggatgccccctcttggccaggagtctaccgcctgtccatgtccctgatggag
cagctgctcaaaactctgcgctacaacttcctgactgaggccctggacttcgtgggtgtc
caccaggagcggaccttacagtgcctcaacgcagtgaggacagtgcagagtctggcctgc
ctggaggaggcggaccacaccgtgggttttattctgcagctctctaacttcatgaaggag
tggcacttccacctgcctcagctcatgcgtgatatccaggtcaacctgggttacttgtgc
caggcatgtacctctctcctgcacagtcgaaagatgctgcagcattacttacagaacaaa
aatggggatggcctcccctcggctgttgcccagcgagtccagaggccaccgtctgctgct
tctgctgccccctcctcctccaagcagcccgctgctgacacagaggcatcagagcagcgg
gccttgcacacagtccagtatggccttctcaagatcctcagcaggacgctggcagccctg
cgccacttcaccccagatgtctgccagatcctgctggatcagtccctggaccttgctgaa
tacaacttcctgtttgccctgagctttaccactcccacctttgactctgaagtggccccc
tccttcgggacccttctggccacagtgaatgtggccctcaacatgcttggagagctggac
aagaaaaaggagcccctcacccaggcagtggggctcagcacacaggcagaagggaccagg
acgttaaagtccctcctgatgtttaccatggaacactgcttctacctgctcatctctcag
gcgatgcggtaccttagggacccggctgtgcacccccgggacaaacagcggatgaagcag
gagctcagctctgagttgagcacgctgctgtccagcctctcgcgctacttccgccgggga
gcccccagctcccctgccactggtgtcctcccctcaccgcagggcaagtccacctctctc
tccaaagccagccctgagagtcaggagcctctgatccagctggtgcaggcgtttgtccgg
catatgcaaagatag
DBGET
integrated database retrieval system
