Pan troglodytes (chimpanzee): 464967
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Entry
464967 CDS
T01005
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X2
KO
K20053
very low-density lipoprotein receptor
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr05017
Spinocerebellar ataxia
ptr05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
464967 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
464967 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptr04131
]
464967 (VLDLR)
Membrane trafficking [BR:
ptr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
464967 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
464967
NCBI-ProteinID:
XP_016816019
Ensembl:
ENSPTRG00000020732
VGNC:
4901
LinkDB
All DBs
Position
11:complement(113277861..113311063)
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AA seq
1151 aa
AA seq
DB search
MLVAPGNCKYPPGARPVSGEAVAIATIVASALTAAAAACSAGGCREGTVMTVGSAQLLRR
QVPWIRKLGQAPGIGGEGGARANQRPPRAPVSARPKRGAAGPLEQSGWRRPRPRPRSLTR
AHTRTLPARAPGCPARVRGARRGKGGLKPPRSRPPAAPPVDHSPSRPLPAPHPALQPPPL
WVLRYRLLSVLSSLLLSAPHPLSLPSSPLASPPLQRLHYFLPAGSACTAAAARGGGWVGG
WVGGEEIVQVVGEGVPSSSPLPSPPNSFPLLLPLSPPRPHLLPPFGRAGNLLCGANGGGG
TIQAGTMGTSALWALWLLLALCWAPRESGATGTGRKAKCEPSQFQCTNGRCITLLWKCDG
DEDCVDGSDEKNCVKKTCAESDFVCNNGQCVPSRWKCDGDPDCEDGSDESPEQCHMRTCR
INEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFVCN
GQDDCSDGSDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPV
IHTKCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGS
RQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKE
CHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLK
GGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVAL
DADIAAQKLFWADLSQKAIFSASIDDKVGRHIKMIDNVYNPAAIAVDWVYKTIYWTDAAS
KTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPL
VTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFE
DRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENGG
CEYLCLPAPQINDHSPKYTCSCPNGYNVEENGRDCQRINVTTAVSEVSVPPKGTSAAWAI
LPLLLLVMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPA
ISVVSTDDDLA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttgcccctggaaactgcaagtaccccccaggtgcacgccccgttagtggggag
gcggtggcaatagcaacgatagttgcatcagcgctaactgctgctgctgctgcatgttct
gctggaggctgccgggagggtacagtaatgactgtagggagcgcacagctgctgcggcgg
caggttccctggatcaggaaattagggcaggcaccggggattggaggcgagggcggtgcg
cgagccaaccagcggccgccccgggcccccgtgagcgccaggccaaagcgcggagcagcc
gggcccctagagcagtccgggtggcggcggccgcggccacgaccacggtcactcacgcgc
gctcacactcgcacactccccgcgcgggcacccggctgcccggcgcgtgtaagaggagcg
cgtcgagggaaaggagggctgaagccgccgcgctcccgcccgcccgccgcgcctcccgtt
gaccactccccctcccgccccctccccgctcctcaccccgctctccagccgccgccgctg
tgggtgctccgctaccggctcctctctgttctgtcctctcttctgctctcggctccccac
cccctctcccttccctcctctccccttgcctcccctcctctgcagcgcctgcattatttt
ctgcccgcaggctcggcttgcactgctgctgcagcccggggaggtgggtgggtgggtggg
tgggttggtggggaggagattgtgcaagttgtaggggagggggtgccctcttcttccccg
ctcccttccccccccaactccttccccctccttctccccctttcccctccccgcccccac
cttcttcctcctttcggaagggctggtaacttgttgtgcggagcgaacggcggcggcggc
accatccaggcgggcaccatgggcacgtccgcgctctgggcgctctggctgctgctcgcg
ctgtgctgggcgccccgggagagcggcgccaccggaaccgggagaaaagccaaatgtgaa
ccctcccaattccagtgcacaaatggtcgctgtattacgctgttgtggaaatgtgatggg
gatgaagactgtgttgacggcagtgatgaaaagaactgtgtaaagaagacgtgtgctgaa
tctgacttcgtgtgcaacaatggccagtgtgttcccagccgatggaagtgtgatggagat
cctgactgtgaagatggttcagatgaaagcccagaacagtgccatatgagaacatgccgc
ataaatgaaatcagctgtggcgcccattctactcagtgtatcccagtgtcctggagatgt
gatggtgaaaatgattgtgacagtggagaagatgaagaaaactgtggcaatataacatgt
agtcccgacgagttcacctgctccagtggccgctgcatctccaggaactttgtatgcaat
ggccaggatgactgcagcgatggcagtgatgagctggactgtgccccgccaacctgtggc
gcccatgagttccagtgcagcacctcctcctgcatccccatcagctgggtatgcgacgat
gatgcagactgctccgaccagtctgatgagtccctggagcagtgtggccgtcagccagtt
atacacaccaagtgtccagccagcgaaatccagtgcggctctggcgagtgcatccataag
aagtggcgatgtgatggggaccctgactgcaaggatggcagtgatgaggtcaactgtccc
tctcgaacttgccgacctgaccaatttgaatgtgaggatggcagctgcatccatggcagc
aggcagtgtaatggtatccgagactgtgtcgatggttccgatgaagtcaactgcaaaaat
gtcaatcagtgcttgggccctggaaaattcaagtgcagaagtggagaatgcatagatatc
agcaaagtatgtaaccaggagcaggactgcagggactggagtgatgagcccctgaaagag
tgtcatataaacgaatgcttggtaaataatggtggatgttctcatatctgcaaagaccta
gttataggctacgagtgtgactgtgcagctgggtttgaactgatagataggaaaacctgt
ggagatattgatgaatgccaaaatccaggaatctgcagtcaaatttgtatcaacttaaaa
ggcggttacaagtgtgaatgtagtcgtggctatcaaatggatcttgctactggcgtgtgc
aaggcagtaggcaaagagccaagtctgatcttcactaatcgaagagacatcaggaagatt
ggcttagagaggaaagaatatatccaactagttgaacagctaagaaacactgtggctctc
gatgctgacattgctgctcagaaactattctgggctgatctaagccaaaaggctatcttc
agtgcctcaattgatgacaaggttggtagacatattaaaatgatcgacaatgtctataat
cctgcagccattgctgttgattgggtgtacaagaccatctactggactgatgcggcttct
aagactatttcagtagctaccctagatggaaccaagaggaagttcctgtttaactctgac
ttgcgagagcctgcctccatagctgtggacccactgtctggctttgtttactggtcagac
tggggtgaaccagctaaaatagaaaaagcaggaatgaatggattcgatagacgtccactg
gtgacagcggatatccagtggcctaacggaattacacttgaccttataaaaagtcgcctc
tattggcttgattctaagttgcacatgttatccagcgtggacttgaatggccaggatcgt
aggatagtactaaagtctctggagttcctagctcatcctcttgcactaacaatatttgag
gatcgtgtctactggatagatggggaaaatgaagcagtctatggtgccaataaattcact
ggatcagagctagccactctagtcaacaacctgaatgatgcccaagacatcattgtctat
catgaacttgtacagccatcaggtaaaaattggtgtgaagaagacatggagaatggagga
tgtgaatacctatgcctgccagcaccacagattaatgatcactctccaaaatatacctgt
tcctgtcccaatgggtacaatgtagaggaaaatggccgagactgtcaaaggatcaatgtg
accacagcagtatcagaggtcagtgttcccccaaaagggacttctgccgcatgggccatt
cttcctctcttgctcttagtgatggcagcagtaggtggctacttgatgtggcggaattgg
caacacaagaacatgaaaagcatgaactttgacaatcctgtgtacttgaaaaccactgaa
gaggacctctccatagacattggtagacacagtgcttctgttggacacacgtacccagca
atatcagttgtaagcacagatgatgatctagcttga
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