Pan troglodytes (chimpanzee): 465749
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Entry
465749 CDS
T01005
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptr04515
]
465749 (PCDH19)
Cell adhesion molecules [BR:
ptr04515
]
Cadherins
Protocadherins
465749 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DUF4529
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
465749
NCBI-ProteinID:
XP_016799326
Ensembl:
ENSPTRG00000022085
VGNC:
12537
LinkDB
All DBs
Position
X:complement(97882864..98000854)
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AA seq
1147 aa
AA seq
DB search
MESLLLPVLLLLAILWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPRLGTVGLSIKVTDSNDNNPVFSE
STYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVLITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKAEDYDEGEN
GRVTYDMTEGDRGFFEIDQVNGEVRTTRTFGESSKSSYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCSNCLT
ITCLLGCFIKGQNSKCLHCISVSPISEEQDKKTEEKVSLRGKRIAEYSYGHQKKSSKKKK
ISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNT
RNTSANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLIKSSTFKDLEG
NSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPDHDQNEGFHCREEC
RILGHSDRCWMPRNPMPIRSKSPEHVRNIIALSIEATAADVEAYDDCGPTKRTFATFGKD
VSDHPAEERPTLKGKRTVDVTICSPKVNSVIREAGNGCEAISPVTSPLHLKSSLPTKPSV
SYTIALAPPARDLEQYVNNVNNGPTRPSEAEPRGADSEKVMHEVSPILKEGRNKESPGVK
RLKDIVL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgctcctgctgccggtgctgctgctgctggccatactgtggacgcaggctgcc
gccctcattaacctcaagtactcggtagaagaggagcagcgcgccgggacggtgattgcc
aacgtcgccaaagacgcgcgagaggcgggcttcgcgctggacccccggcaggcttcagcc
tttcgcgtggtgtccaactcggctccacacctagtggacatcaatcccagctctggcctg
ctggtcaccaagcagaagattgaccgtgatctgctgtgccgccagagccccaagtgcatc
atctcgctcgaggtcatgtccagctcaatggaaatctgcgtgataaaggtggagatcaag
gacctgaacgacaatgcgcccagtttcccggcagcccagatcgagctggagatctcggag
gcagccagccctggcacgcgcatcccgctggacagcgcttacgatccagactcaggaagc
tttggcgtgcagacttacgagctcacgcccaacgagctgttcggcctggagatcaagacg
cgcggcgacggctcgcgctttgccgaactcgtggtggaaaagagcctggaccgcgagacg
cagtcgcactacagcttccgaatcactgcgctagacggtggcgacccgccgcgcctgggc
accgttggccttagtatcaaggtgaccgactccaatgacaacaacccggtgtttagcgag
tccacctacgcggtgagcgtgccagaaaactcgcctcccaacacacccgtcatccgcctc
aacgccagcgatccagacgagggcaccaacggccaggtggtctactccttctatggctac
gtcaacgaccgcacgcgcgagctctttcagatcgacccgcacagtggcctggtcactgtc
actggcgctttagactacgaagaggggcacgtgtacgaactggacgtgcaggctaaggac
ttggggcccaattccatcccggcacactgcaaggtcaccgtcagcgtgctggacaccaat
gacaatccgccggtcatcaacctgctgtcagtcaacagtgagcttgtggaggtcagcgag
agcgcccccccgggctacgtgatcgccttggtgcgggtgtctgatcgcgactcaggcctc
aatggacgtgtgcagtgccgtttgctgggcaatgtgccctttcgactgcaggaatatgag
agcttctccactattctggtggacggacggctggaccgcgagcagcacgaccaatacaac
ctcacaattcaggcacgcgacggcggcgtgcccatgctgcagagtgccaagtcctttacc
gtgctcatcactgacgaaaatgacaaccacccgcacttttccaagccctactaccaggtc
attgtgcaggagaacaacactcctggcgcctatctgctctctgtgtctgctcgcgacccc
gacctgggtctcaacggcagtgtctcctaccagatcgtgccgtcgcaggtgcgggacatg
cctgtcttcacctatgtctccatcaatcccaactcaggtgacatctacgcgctgcgatcc
tttaaccacgagcagaccaaggcgttcgaattcaaggtgctggccaaggacggcggcctt
ccctcactgcaaagcaacgctacggtgcgggtcatcatcctcgacgtcaacgacaacacc
ccggtcatcacagccccacctctgattaacggcactgccgaggtctacataccccgcaac
tctggcataggctacctggtgactgttgtcaaggcagaagactacgatgagggcgaaaat
ggccgagtcacctacgacatgaccgagggcgaccgcggcttctttgaaatagaccaggtc
aatggcgaagtcagaaccacccgcaccttcggggagagctccaagtcctcctatgagctt
atcgtggtggctcacgaccatggcaagacatctctctctgcctctgctctcgtcctaatc
tacttgtcccctgctctcgatgcccaagagtcaatgggctctgtgaacttgtccttgatt
tttattattgccctgggctccattgcgggcatcctctttgtaactatgatcttcgtggca
atcaagtgcaagcgagacaacaaagagatccggacctacaactgcagtaattgtttaacc
atcacttgtctcctcggctgttttataaaaggacaaaacagcaagtgtctgcattgcatc
tcggtttctcccattagcgaggagcaagacaaaaagacagaggagaaagtgagcctaagg
ggaaagagaattgctgagtactcctatgggcatcaaaagaaatcaagcaagaagaaaaaa
atcagtaagaatgacatccgcctggtaccccgggatgtggaggagacagacaagatgaac
gttgtcagttgctcttccctgacctcctccctcaactattttgactaccaccagcagacg
ctgcccctgggctgccgccgctctgagagcactttcctgaatgtggagaaccagaatacc
cgcaacaccagtgctaaccacatctaccatcactctttcaacagccaggggccccagcag
cctgacctgattatcaacggtgtgcctctgcctgagactgaaaactattcttttgactcc
aactacgtgaatagccgagcccatttaatcaagagctccaccttcaaggacttagagggc
aacagcctgaaggatagtggacatgaggagagtgaccaaactgacagtgagcatgatgtc
cagcggagcctgtattgtgatactgctgtcaacgatgtgctgaacaccagtgtgacctcc
atgggatctcagatgcctgatcatgatcagaatgaaggatttcattgccgggaagaatgc
cggattcttggccactctgacaggtgctggatgccccggaaccccatgcccatccgttcc
aagtcccctgagcatgtgaggaacatcatcgcgctgtctattgaagctactgctgctgat
gtcgaggcttatgacgactgcggccccaccaaacggactttcgcaacctttgggaaagat
gtcagcgaccacccggctgaggagaggcctaccctgaaaggcaagaggactgtcgatgtg
accatctgcagccccaaggtcaacagcgttatccgggaggcaggcaatggctgtgaggcg
attagccctgtcacctcccccctccacctcaagagctctctgcccaccaagccttccgtg
tcttacaccattgccctggctcccccggcccgtgatctggagcagtatgtcaacaatgtc
aacaatggccctactcgtccctctgaagctgagccccgtggagctgatagtgagaaagtc
atgcatgaggtcagccccattctgaaggaaggtcgcaacaaagagtcccctggtgtgaag
cgtctgaaggatatcgttctctaa
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