KEGG   Pan troglodytes (chimpanzee): 465749
Entry
465749            CDS       T01005                                 
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
  KO
K16499  protocadherin delta 2
Organism
ptr  Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ptr04515]
    465749 (PCDH19)
Cell adhesion molecules [BR:ptr04515]
 Cadherins
  Protocadherins
   465749 (PCDH19)
SSDB
Motif
Pfam: Cadherin Cadherin_2 DUF4529 Cadherin_4
Other DBs
NCBI-GeneID: 465749
NCBI-ProteinID: XP_016799326
Ensembl: ENSPTRG00000022085
VGNC: 12537
LinkDB
Position
X:complement(97882864..98000854)
AA seq 1147 aa
MESLLLPVLLLLAILWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPRLGTVGLSIKVTDSNDNNPVFSE
STYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVLITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKAEDYDEGEN
GRVTYDMTEGDRGFFEIDQVNGEVRTTRTFGESSKSSYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCSNCLT
ITCLLGCFIKGQNSKCLHCISVSPISEEQDKKTEEKVSLRGKRIAEYSYGHQKKSSKKKK
ISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNT
RNTSANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLIKSSTFKDLEG
NSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPDHDQNEGFHCREEC
RILGHSDRCWMPRNPMPIRSKSPEHVRNIIALSIEATAADVEAYDDCGPTKRTFATFGKD
VSDHPAEERPTLKGKRTVDVTICSPKVNSVIREAGNGCEAISPVTSPLHLKSSLPTKPSV
SYTIALAPPARDLEQYVNNVNNGPTRPSEAEPRGADSEKVMHEVSPILKEGRNKESPGVK
RLKDIVL
NT seq 3444 nt   +upstreamnt  +downstreamnt
atggagtcgctcctgctgccggtgctgctgctgctggccatactgtggacgcaggctgcc
gccctcattaacctcaagtactcggtagaagaggagcagcgcgccgggacggtgattgcc
aacgtcgccaaagacgcgcgagaggcgggcttcgcgctggacccccggcaggcttcagcc
tttcgcgtggtgtccaactcggctccacacctagtggacatcaatcccagctctggcctg
ctggtcaccaagcagaagattgaccgtgatctgctgtgccgccagagccccaagtgcatc
atctcgctcgaggtcatgtccagctcaatggaaatctgcgtgataaaggtggagatcaag
gacctgaacgacaatgcgcccagtttcccggcagcccagatcgagctggagatctcggag
gcagccagccctggcacgcgcatcccgctggacagcgcttacgatccagactcaggaagc
tttggcgtgcagacttacgagctcacgcccaacgagctgttcggcctggagatcaagacg
cgcggcgacggctcgcgctttgccgaactcgtggtggaaaagagcctggaccgcgagacg
cagtcgcactacagcttccgaatcactgcgctagacggtggcgacccgccgcgcctgggc
accgttggccttagtatcaaggtgaccgactccaatgacaacaacccggtgtttagcgag
tccacctacgcggtgagcgtgccagaaaactcgcctcccaacacacccgtcatccgcctc
aacgccagcgatccagacgagggcaccaacggccaggtggtctactccttctatggctac
gtcaacgaccgcacgcgcgagctctttcagatcgacccgcacagtggcctggtcactgtc
actggcgctttagactacgaagaggggcacgtgtacgaactggacgtgcaggctaaggac
ttggggcccaattccatcccggcacactgcaaggtcaccgtcagcgtgctggacaccaat
gacaatccgccggtcatcaacctgctgtcagtcaacagtgagcttgtggaggtcagcgag
agcgcccccccgggctacgtgatcgccttggtgcgggtgtctgatcgcgactcaggcctc
aatggacgtgtgcagtgccgtttgctgggcaatgtgccctttcgactgcaggaatatgag
agcttctccactattctggtggacggacggctggaccgcgagcagcacgaccaatacaac
ctcacaattcaggcacgcgacggcggcgtgcccatgctgcagagtgccaagtcctttacc
gtgctcatcactgacgaaaatgacaaccacccgcacttttccaagccctactaccaggtc
attgtgcaggagaacaacactcctggcgcctatctgctctctgtgtctgctcgcgacccc
gacctgggtctcaacggcagtgtctcctaccagatcgtgccgtcgcaggtgcgggacatg
cctgtcttcacctatgtctccatcaatcccaactcaggtgacatctacgcgctgcgatcc
tttaaccacgagcagaccaaggcgttcgaattcaaggtgctggccaaggacggcggcctt
ccctcactgcaaagcaacgctacggtgcgggtcatcatcctcgacgtcaacgacaacacc
ccggtcatcacagccccacctctgattaacggcactgccgaggtctacataccccgcaac
tctggcataggctacctggtgactgttgtcaaggcagaagactacgatgagggcgaaaat
ggccgagtcacctacgacatgaccgagggcgaccgcggcttctttgaaatagaccaggtc
aatggcgaagtcagaaccacccgcaccttcggggagagctccaagtcctcctatgagctt
atcgtggtggctcacgaccatggcaagacatctctctctgcctctgctctcgtcctaatc
tacttgtcccctgctctcgatgcccaagagtcaatgggctctgtgaacttgtccttgatt
tttattattgccctgggctccattgcgggcatcctctttgtaactatgatcttcgtggca
atcaagtgcaagcgagacaacaaagagatccggacctacaactgcagtaattgtttaacc
atcacttgtctcctcggctgttttataaaaggacaaaacagcaagtgtctgcattgcatc
tcggtttctcccattagcgaggagcaagacaaaaagacagaggagaaagtgagcctaagg
ggaaagagaattgctgagtactcctatgggcatcaaaagaaatcaagcaagaagaaaaaa
atcagtaagaatgacatccgcctggtaccccgggatgtggaggagacagacaagatgaac
gttgtcagttgctcttccctgacctcctccctcaactattttgactaccaccagcagacg
ctgcccctgggctgccgccgctctgagagcactttcctgaatgtggagaaccagaatacc
cgcaacaccagtgctaaccacatctaccatcactctttcaacagccaggggccccagcag
cctgacctgattatcaacggtgtgcctctgcctgagactgaaaactattcttttgactcc
aactacgtgaatagccgagcccatttaatcaagagctccaccttcaaggacttagagggc
aacagcctgaaggatagtggacatgaggagagtgaccaaactgacagtgagcatgatgtc
cagcggagcctgtattgtgatactgctgtcaacgatgtgctgaacaccagtgtgacctcc
atgggatctcagatgcctgatcatgatcagaatgaaggatttcattgccgggaagaatgc
cggattcttggccactctgacaggtgctggatgccccggaaccccatgcccatccgttcc
aagtcccctgagcatgtgaggaacatcatcgcgctgtctattgaagctactgctgctgat
gtcgaggcttatgacgactgcggccccaccaaacggactttcgcaacctttgggaaagat
gtcagcgaccacccggctgaggagaggcctaccctgaaaggcaagaggactgtcgatgtg
accatctgcagccccaaggtcaacagcgttatccgggaggcaggcaatggctgtgaggcg
attagccctgtcacctcccccctccacctcaagagctctctgcccaccaagccttccgtg
tcttacaccattgccctggctcccccggcccgtgatctggagcagtatgtcaacaatgtc
aacaatggccctactcgtccctctgaagctgagccccgtggagctgatagtgagaaagtc
atgcatgaggtcagccccattctgaaggaaggtcgcaacaaagagtcccctggtgtgaag
cgtctgaaggatatcgttctctaa

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