Pan troglodytes (chimpanzee): 465804
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Entry
465804 CDS
T01005
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04151
PI3K-Akt signaling pathway
ptr04510
Focal adhesion
ptr04512
ECM-receptor interaction
ptr04820
Cytoskeleton in muscle cells
ptr04926
Relaxin signaling pathway
ptr04933
AGE-RAGE signaling pathway in diabetic complications
ptr04974
Protein digestion and absorption
ptr05146
Amoebiasis
ptr05165
Human papillomavirus infection
ptr05200
Pathways in cancer
ptr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
465804 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
465804 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
465804 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
465804 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
465804 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
465804 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
465804 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
465804 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
465804 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
465804 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
465804 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptr04147
]
465804 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
ptr00536
]
465804 (COL4A6)
Exosome [BR:
ptr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
465804 (COL4A6)
Glycosaminoglycan binding proteins [BR:
ptr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
465804 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
465804
NCBI-ProteinID:
XP_016798387
Ensembl:
ENSPTRG00000022171
VGNC:
10729
UniProt:
A0A2J8J2L1
LinkDB
All DBs
Position
X:complement(105645840..105925326)
Genome browser
AA seq
1687 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKSYGKPCGGQDCSGSCQCFPEKGARGRPGPIGIQGPT
GPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPP
GLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDG
ITGQQGAPGFPGAAGPAGPPGLQGPPGPPGPLGPDGNMGLGFQGEKGVKGDVGLPGPAGP
PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGTTGEKGEKGIPGLPGPRGP
MGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGDIGLPGPDVFIDIDGAVISGNPGDP
GVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAVG
LPGRDGLPGPPGPPGPPSPEFETETLHNKEPGFPGLRGEQGPKGNLGLKGIKGDSGFCAC
DGGVPNTGPPGEPGPPGPWGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGPLGPSGPKGK
KGEPILSTIQGMPGDRGDSGSQGFRGVIGEPGKDGVPGLPGLPGLPGDGGQGFPGEKGLP
GLPGEKGHPGPPGLPGNGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGITLPCIIPGSYG
PSGFPGTPGFPGPKGSRGLPGTPGQPGSSGTKGEPGSPGLVHLPELPGFPGPRGEKGLPG
FPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKGFLGDSGLPGL
KGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGISGHPGK
KGTRGKKGPPGSIVKKGLPGLKGLPGNPGLVGLKGSPGSPGVAGLPALSGPKGEKGSVGF
VGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNPGPVGIPSPRRPMSN
LWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMG
IRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISSSPGPK
GQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLP
GSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPG
PKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPGRP
GLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFPGIPGPKGPKGDQGIPGFSGLPGELGLK
GMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGPRGAPGQTPTAEAVQVPPGPLGL
PGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPPGF
EGAPGQQGPFGMPGMPGQSMRVGYTLVKHSQSEQVPPCPIGMSQLWVGYSLLFVEGQEKA
HNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVSQTQIPQY
ISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSC
LEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETLKAGQLHTRVSRC
QVCMKSL
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgaccgaggaactggcagga
gcgggagagaagtcttatggaaagccatgtgggggccaggactgcagtgggagctgtcag
tgttttcctgagaaaggagcgagaggacgacctggaccaattggaattcaaggcccaaca
ggtcctcaaggattcactggctctactggtttatcgggattgaaaggagaaaggggtttc
ccaggccttctgggaccttatggaccaaaaggagataagggtcccatgggagttcctggc
tttcttggcatcaatgggattccgggccaccctggacaaccaggccccagaggcccacct
ggtctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggctat
cctgggcttctcggaccacccgggcttcctggtcagaaaggatcaaaaggtgaccctgtc
cttgctccaggtagtttcaaaggaatgaagggggatcctgggctgcctggactggatgga
atcactggccaacaaggagcacccggatttcctggagctgcaggacctgcaggaccacca
ggattacaaggtcctccagggcctcctggtcctcttggtcctgatgggaatatggggcta
ggttttcaaggagagaaaggagtcaagggggatgttggcctccctggcccagcaggacct
ccaccatctactggagagctggaattcatgggattccccaaagggaagaaaggatccaag
ggtgaaccagggcctaagggttttccaggcataagtggccctccaggcttcccgggcctt
ggaactactggagaaaagggagaaaagggaatccctggtttgccaggacctaggggtccc
atgggttcagaaggagtccaaggccctccagggcaacagggcaagaaagggaccctggga
tttcctgggcttaatggattccaaggaattgagggtcaaaagggtgacattggcctgcca
ggcccagatgttttcatcgatatagatggtgctgtgatctcaggtaatcctggagatcct
ggtgtacctggcctcccaggccttaaaggagatgaaggcatccaaggcctacgtggccct
tctggtgtccctggattgccagcattatcaggtgtcccaggagccctagggcctcaggga
tttccagggctgaagggggaccaaggaaacccaggccgtaccacaattggagcagttggc
ctccctggcagagatggtttgccaggcccaccaggtccaccaggcccacctagtccagaa
tttgagactgaaactctacacaacaaagagccagggttccctggtctccgaggagaacaa
ggtccaaaaggaaacctaggcctcaaaggaataaaaggagactcaggtttctgtgcttgt
gacggtggtgttcccaacactggaccacccggggaaccaggcccacctggtccatggggt
ctcataggccttccaggccttaaaggagccagaggagatcgaggctctgggggtgcacag
ggcccagcaggggctccaggcttagttgggcctctgggtccttcaggacccaaaggaaag
aagggggaaccaattctcagtacaatccaaggaatgccaggagatcggggtgattctggc
tcccagggcttccgtggtgtaataggagaaccaggcaaagacggagtaccaggtttacca
ggtctgccaggccttccgggtgatggtggacagggcttcccaggtgaaaaggggttacct
ggacttcctggtgaaaaaggccatcctggtccacctggcctcccaggaaatgggttacca
ggacttcctggaccccgtgggcttcctggagataaaggcaaggatggattaccgggacaa
caaggccttcccggatctaagggaatcaccctgccctgtattattcctgggtcatacggt
ccatcaggatttccaggcactcccggattcccaggccctaaagggtctcgaggcctccct
gggaccccaggccagcctgggtcaagtggaactaaaggagagccagggagtccaggattg
gttcatcttcctgaattaccaggatttcctggacctcgtggggagaagggcttgcctggg
tttcctgggctccctggaaaagatggcttgcctgggatgattggcagtccaggcttacct
ggttccaagggagccactggtgacatctttggtgctgaaaatggtgctccgggggaacaa
ggcctacaaggattaacagggcacaaaggatttcttggagactctggccttccaggactc
aagggtgtgcacgggaagcctggcttactaggccccaaaggtgagcggggcagccctggg
acaccaggacaggtgggacagccaggcactccaggatctagtggtccatatggcatcaag
ggcaaatctgggctcccaggagcaccaggcttcccaggcatctcaggacatcctggaaag
aaaggaacaagaggcaagaaaggtcctcctggatcaattgtaaagaaagggctgccaggg
ctaaaaggccttcctggaaatccaggcctagtaggactgaaaggaagcccaggctctcca
ggggtcgctgggttgccagccctctctggacccaagggagagaaggggtctgttggattc
gtaggttttccaggaataccaggtctgcctggtattcctggaacaagaggattaaaggga
attccaggatcaactggaaaaatgggaccatctggacgcgctggtactcctggtgaaaag
ggagacagaggcaatccggggccagtcggaatacctagtccaagacgtccaatgtcaaac
ctttggctcaaaggagacaaaggctctcaaggctcagccggatccaatggatttcctggg
ccaagaggtgacaaaggagaggctggtcgacctgggccaccaggcctacctggagctcct
ggcctcccaggcattatcaaaggagttagtggaaagccagggccccctggcttcatggga
atccggggcttacctggcctgaaggggtcctctgggatcacaggtttcccaggaatgcca
ggagaaagtggttcacaaggtatcagagggtcgcctggactcccaggagcatctggtctc
ccaggcctgaaaggagacaacggccagacagttgaaatttccagtagcccaggacccaag
ggacagcctggcgaatctggttttaaaggtacaaaaggaagagatggactaataggcaat
ataggcttccctggaaacaaaggtgaagatggaaaagttggtgtttccggagatgttggc
cttcctggagctccaggatttccaggagttgccggcatgagaggagaaccaggacttcca
ggttcttctggtcaccaaggggcaattgggcctctaggatcccccggattaataggaccc
aaaggcttccctggatttcctggtttacatggactgaatgggcttccgggcaccaagggt
acccatggcactccaggacctagtatcaccggtgtgcccgggcctgctggtctccctgga
cccaaaggagaaaaaggatatccaggaattggcatcggagctccagggaagccgggcctg
agagggcaaaaaggtgatcgaggtttcccaggtctccagggccctgctggtctccccggt
gccccaggcatctccttgccctcactcatagcaggacagcctggtgaccccgggcgacca
ggcctagatggagaacgaggccgcccaggccccgctggacccccaggtccccctgggcca
tcctcgaatcaaggcgacaccggagaccctggcttccctggaattcctggacctaaaggg
cctaagggagaccaaggaattccaggtttttctggcctccctggagagctaggactgaaa
ggcatgagaggtgagcctggcttcatggggactccaggcaaggttgggccacctggagac
ccaggatttcccggaatgaaggggaaggcagggccaagaggctcttctggcccccgaggt
gcacctggacaaacaccaactgcggaagctgtccaggttcctcctggacccttgggtcta
ccagggatcgatggcatccctggcctcactggggaccctggggctcaaggccctgtaggc
ctacaaggctccaaaggtttacctggcatccccggtaaagatggccccagtgggctccca
ggcccacctggggctcttggtgatcctggtctgcctggactgcaaggccctccaggattt
gaaggagctccagggcagcaaggccccttcgggatgcctggaatgcctggccagagcatg
agagtgggctacacgttggtaaagcacagccagtcggaacaggtgcccccgtgtcccatc
gggatgagccagctgtgggtggggtacagcttactgtttgtggaggggcaagagaaagcc
cacaaccaggacctgggctttgctggctcctgtctgccccgcttcagcaccatgcccttc
atctactgcaacatcaacgaggtgtgccactatgccaggcgcaatgataaatcttactgg
ctctccactaccgcccctatccccatgatgcccgtcagccagacccagattccccagtac
atcagccgctgctctgtgtgtgaggcaccctcgcaagccattgctgtgcacagccaggac
atcaccatcccgcagtgccccctgggctggcgcagcctctggattgggtactctttcctc
atgcacactgccgctggtgccgagggtggaggccagtccctggtctcacctggctcctgc
ctggaggactttcgggccactcctttcatcgaatgcagtggtgcccgaggcacctgccac
tactttgcaaacaagtacagtttctggttgaccacagtggaggagaggcagcagtttggg
gagttgcctgtgtctgaaacgctgaaagctgggcagctccacactcgagtcagtcgctgc
caggtgtgtatgaaaagcctatag
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