Pan troglodytes (chimpanzee): 465954
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Entry
465954 CDS
T01005
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03013
Nucleocytoplasmic transport
ptr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
465954 (UPF3B)
03015 mRNA surveillance pathway
465954 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
465954 (UPF3B)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
465954 (UPF3B)
mRNA cycle factors
P-body specific factors
465954 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
465954
NCBI-ProteinID:
XP_016798728
Ensembl:
ENSPTRG00000022228
VGNC:
14820
UniProt:
A0A6D2XS14
H2QZ21
LinkDB
All DBs
Position
X:complement(117371701..117391353)
Genome browser
AA seq
483 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPAGATGSGGGTSGDSSKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYATDNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRIPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLSDERASGQSCTLPKRSDSELKDEKPKRPEDESGRDYREREREYERDQERIL
RERERLKRQEEERRRQKERYEKEKTFKRKEEEMKKEKDTLRDKGKKAESTESIGSSEKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAAERKQESGISHRKEG
GEE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagaaggagcacaggcctaaggagaagcgagtaaccctgttaacccccgcc
ggggccacaggcagcggtggtgggacctcgggggacagctccaagggggaagataagcag
gatcgcaacaaggagaagaaagaagcgctgagcaaggtggtaattcgaagattacctccc
actttgaccaaggagcagcttcaggaacatcttcaacctatgcctgagcatgattatttt
gagtttttttctaatgatacgagtttgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcccgctatagtagaatttgcaccttttcaaaaagctgcg
aaaaagaagactaagaaaagagataccaaagtcgggactatcgatgatgatcctgaatat
agaaagtttttggaaagttatgccacagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaagagagaagaaagaaggagg
agagaaatagaaagaaaaagacaaagagaagaagagaggaggaaatggaaagaagaagag
aaacgaaaaaggaaagatatagaaaagctaaagaagatagacagaattccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctgctcaagaagccagaaaaaggggatgaaaaagaattggacaaaagagaaaaa
gccaagaaattggacaaagagaatctcagtgatgaaagagccagtgggcaaagttgtaca
ttgcccaagcgttctgatagcgaacttaaagatgaaaaaccaaagagacctgaagatgag
agtggcagagactacagggagagggaacgggaatatgaacgagatcaggagcgcatactt
cgagaaagagagaggctgaagcggcaagaagaagagcgccgtaggcagaaggagcgctat
gagaaagagaagacttttaagagaaaagaagaagaaatgaaaaaagagaaagacacactt
cgggataaaggaaagaaggctgaaagtacagaatcaataggcagctcagaaaaaactgaa
aagaaagaagaagtggtcaagagagatcgaataagaaacaaggatcgtccagcgatgcag
ctttaccaaccaggagctcgaagccgaaatcgactctgtccccctgatgacagcaccaag
tctggagattcagcagcagaaaggaagcaggaaagtggtattagccatagaaaagaagga
ggagaggagtga
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integrated database retrieval system
