Pan troglodytes (chimpanzee): 466449
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Entry
466449 CDS
T01005
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
466449 (SOX6)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
466449 (SOX6)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
Phage_holin_7_1
Motif
Other DBs
NCBI-GeneID:
466449
NCBI-ProteinID:
XP_016775943
Ensembl:
ENSPTRG00000003393
VGNC:
1000
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Position
9:complement(20057806..20827964)
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AA seq
843 aa
AA seq
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MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV
NTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP
ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
QQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKP
GDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGH
SYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDE
AAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLG
KWKSQHQEETYELDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGK
LSSINNMGLNNCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKAMNGS
AAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPD
MHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKL
RIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSST
SASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAV
SAN
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaagccacctctccatttgcctgtgcagctgatggagaggatgcaatg
acccaggatttaacctcaagggaaaaggaagagggcagtgatcaacatgtggcctcccat
ctgcctctgcaccccataatgcacaacaaacctcactctgaggagctaccaacacttgtc
aataccattcaacaagatgctgactgggacagcgttctgtcatctcagcaaagaatggaa
tcagagaataataagttatgttccctatattccttccgaaatacctctacctcaccacat
aagcctgacgaagggagtcgggaccgtgagataatgaccagtgttacttttggaacccca
gaacgccgcaaagggagtcttgccgatgtggtggacacactgaaacagaagaagcttgag
gaaatgactcggactgaacaagaggattcctcctgcatggaaaaactactttcaaaagat
tggaaggaaaaaatggaaagactaaataccagtgaacttcttggagaaattaaaggtaca
cctgagagcctggcagaaaaagaacggcagctctccaccatgattacccagctgatcagt
ttacgggagcagctactggcagcgcatgatgaacagaaaaaactggcagcctcacaaatt
gagaaacaacggcagcaaatggaccttgctcgccaacagcaagaacagattgcgagacaa
cagcagcaacttctgcaacagcagcacaaaattaatctcctgcagcaacagatccagcag
gttcagggtcacatgcctccgctcatgatcccaatttttccacatgaccagcggaccctg
gcagcagctgctgctgcccaacagggattcctcttcccccctggaataacatacaaacca
ggtgataactaccccgtacagttcattccatcaacaatggcagctgctgctgcttctgga
ctcagccctttacagctccagaagggtcatgtctcccacccacaaattaaccaaaggcta
aagggcctaagtgaccgttttggcaggaatttggacacctttgaacatggtggtggccac
tcttacaaccacaaacagattgagcagctctatgccgctcagctggccagcatgcaggtg
tcacctggagcaaagatgccatcaactccacagccaccaaacacagcagggacggtctca
cctactgggataaaaaatgaaaagagagggaccagccctgtaactcaagttaaggatgaa
gcagcagcacagcctctgaatctctcatcccgacccaagacagcagagcctgtaaagtcc
ccaacgtctcccacccagaacctcttcccagccagcaaaaccagccctgtcaacctgcca
aacaaaagcagcatccctagccccattggaggaagcctgggaagaggatcctctttaggt
aaatggaaaagtcaacaccaggaagagacttacgaattagatatcctatctagtctcaac
tcccctgccctttttggggatcaggatacagtgatgaaagccattcaggaggcgcggaag
atgcgagagcagatccagcgggagcaacagcagcaacagccacatggtgttgacgggaaa
ctgtcctccataaataatatggggctgaacaactgcaggaatgaaaaggaaagaacgcgc
tttgagaatttggggccccagttaacgggaaagtcaaatgaagatggaaaactgggccca
ggtgtcatcgaccttactcggccagaagatgcagagggaagtaaagcaatgaatggctct
gcagctaaactacagcagtattattgttggccaacaggaggtgccactgtggctgaagca
cgagtctacagggacgcccgcggccgtgccagcagcgagccacacatcaagcgaccaatg
aatgcattcatggtttgggcaaaggatgagaggagaaaaatccttcaggccttccccgac
atgcataactccaacattagcaaaatcttaggatctcgctggaaatcaatgtccaaccag
gagaagcaaccttattatgaagagcaggcccggctaagcaagatccacttagagaagtac
ccaaactataaatacaaaccccgaccgaaacgcacctgcattgttgatggcaaaaagctt
cggattggggagtataagcaactgatgaggtctcggagacaggagatgaggcagttcttt
actgtggggcaacagcctcagattccaatcaccacaggaacaggtgttgtgtatcctggt
gctatcactatggcaactaccacaccatcgcctcagatgacatctgactgctctagcacc
tcggccagcccggagcccagcctcccggtcatccagagcacttatggtatgaagacagat
ggcggaagcctagctggaaatgaaatgattaatggagaggatgaaatggaaatgtatgat
gactatgaagatgaccccaaatcagactatagcagtgaaaatgaagccccggaggctgtc
agtgccaactga
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