Pan troglodytes (chimpanzee): 466449
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Entry
466449 CDS
T01005
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
466449 (SOX6)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
466449 (SOX6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
466449
NCBI-ProteinID:
XP_009458271
Ensembl:
ENSPTRG00000003393
VGNC:
1000
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All DBs
Position
11:complement(15769267..16415401)
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AA seq
855 aa
AA seq
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MPSSSEVLADVVRESRIEEWKSSHFVRMSSKQATSPFACAADGEDAMTQDLTSREKEEGS
DQHVASHLPLHPIMHNKPHSEELPTLVNTIQQDADWDSVLSSQQRMESENNKLCSLYSFR
NTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCM
EKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQK
KLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFP
HDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHP
QINQRLKGLSDRFGRNLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPN
TAGTVSPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKT
SPVNLPNKSSIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQRE
QQQQQPHGVDGKLSSINNMGLNNCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRP
EDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAK
DERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPR
PKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTT
PSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKS
DYSSENEAPEAVSAN
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaagttctgaagttctggctgatgtggtaagagaaagccggattgaagagtgg
aagagcagccacttcgtaagaatgtcttccaagcaagccacctctccatttgcctgtgca
gctgatggagaggatgcaatgacccaggatttaacctcaagggaaaaggaagagggcagt
gatcaacatgtggcctcccatctgcctctgcaccccataatgcacaacaaacctcactct
gaggagctaccaacacttgtcaataccattcaacaagatgctgactgggacagcgttctg
tcatctcagcaaagaatggaatcagagaataataagttatgttccctatattccttccga
aatacctctacctcaccacataagcctgacgaagggagtcgggaccgtgagataatgacc
agtgttacttttggaaccccagaacgccgcaaagggagtcttgccgatgtggtggacaca
ctgaaacagaagaagcttgaggaaatgactcggactgaacaagaggattcctcctgcatg
gaaaaactactttcaaaagattggaaggaaaaaatggaaagactaaataccagtgaactt
cttggagaaattaaaggtacacctgagagcctggcagaaaaagaacggcagctctccacc
atgattacccagctgatcagtttacgggagcagctactggcagcgcatgatgaacagaaa
aaactggcagcctcacaaattgagaaacaacggcagcaaatggaccttgctcgccaacag
caagaacagattgcgagacaacagcagcaacttctgcaacagcagcacaaaattaatctc
ctgcagcaacagatccaggttcagggtcacatgcctccgctcatgatcccaatttttcca
catgaccagcggaccctggcagcagctgctgctgcccaacagggattcctcttcccccct
ggaataacatacaaaccaggtgataactaccccgtacagttcattccatcaacaatggca
gctgctgctgcttctggactcagccctttacagctccagaagggtcatgtctcccaccca
caaattaaccaaaggctaaagggcctaagtgaccgttttggcaggaatttggacaccttt
gaacatggtggtggccactcttacaaccacaaacagattgagcagctctatgccgctcag
ctggccagcatgcaggtgtcacctggagcaaagatgccatcaactccacagccaccaaac
acagcagggacggtctcacctactgggataaaaaatgaaaagagagggaccagccctgta
actcaagttaaggatgaagcagcagcacagcctctgaatctctcatcccgacccaagaca
gcagagcctgtaaagtccccaacgtctcccacccagaacctcttcccagccagcaaaacc
agccctgtcaacctgccaaacaaaagcagcatccctagccccattggaggaagcctggga
agaggatcctctttagatatcctatctagtctcaactcccctgccctttttggggatcag
gatacagtgatgaaagccattcaggaggcgcggaagatgcgagagcagatccagcgggag
caacagcagcaacagccacatggtgttgacgggaaactgtcctccataaataatatgggg
ctgaacaactgcaggaatgaaaaggaaagaacgcgctttgagaatttggggccccagtta
acgggaaagtcaaatgaagatggaaaactgggcccaggtgtcatcgaccttactcggcca
gaagatgcagagggaagtaaagcaatgaatggctctgcagctaaactacagcagtattat
tgttggccaacaggaggtgccactgtggctgaagcacgagtctacagggacgcccgcggc
cgtgccagcagcgagccacacatcaagcgaccaatgaatgcattcatggtttgggcaaag
gatgagaggagaaaaatccttcaggccttccccgacatgcataactccaacattagcaaa
atcttaggatctcgctggaaatcaatgtccaaccaggagaagcaaccttattatgaagag
caggcccggctaagcaagatccacttagagaagtacccaaactataaatacaaaccccga
ccgaaacgcacctgcattgttgatggcaaaaagcttcggattggggagtataagcaactg
atgaggtctcggagacaggagatgaggcagttctttactgtggggcaacagcctcagatt
ccaatcaccacaggaacaggtgttgtgtatcctggtgctatcactatggcaactaccaca
ccatcgcctcagatgacatctgactgctctagcacctcggccagcccggagcccagcctc
ccggtcatccagagcacttatggtatgaagacagatggcggaagcctagctggaaatgaa
atgattaatggagaggatgaaatggaaatgtatgatgactatgaagatgaccccaaatca
gactatagcagtgaaaatgaagccccggaggctgtcagtgccaactga
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