Pan troglodytes (chimpanzee): 468201
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Entry
468201 CDS
T01005
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X2
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04082
Neuroactive ligand signaling
ptr04721
Synaptic vesicle cycle
ptr04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
468201 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
468201 (SLC6A4)
04721 Synaptic vesicle cycle
468201 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptr02000
]
468201 (SLC6A4)
Transporters [BR:
ptr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
468201 (SLC6A4)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
468201
NCBI-ProteinID:
XP_001135066
Ensembl:
ENSPTRG00000008958
VGNC:
9626
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Position
19:37336211..37377133
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AA seq
672 aa
AA seq
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MSQSRRVNPDDRELGGDPQIQAPRYQLGSLADGHQCYLLTSRMETTPLNSQKQLSACEDG
EDCQENGVLQKVVPTPGDKVESGQISNGYSAVPSPGAGDDTRHSIPAATTTLVAELHQGE
RETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYTIMAIFGGIPLFYMELA
LGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQLPWT
SCKNSWNTGNCTNYFSEGNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALC
IMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGATLPGAWRGVLFYLKPNWQ
KLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFV
IFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDS
TFAGLEGVITAVLDEFPHIWAKRREWFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATG
PAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLM
SPPQLRLFQYNYPYWSIILGYCIGTSSFICIPTYIAYRLIITPGTFKERIIKSITPETPT
EIPCGDIRLNAV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatcccgacgtgtcaatcccgatgatagagagctcggaggtgatccacaaatc
caagcacccagatatcaattgggatccttggcagatggacatcagtgttatttactaacc
agcaggatggagaccacacccttaaattctcagaagcagctatccgcgtgtgaggatgga
gaagattgtcaggaaaacggagttctacagaaggttgttcccaccccaggggacaaagtg
gagtccgggcaaatatccaatgggtactcagcagttccaagtcctggtgcgggagatgac
acacggcactctatcccagcggccaccaccaccctagtggctgagcttcatcaaggggaa
cgggagacgtggggcaagaaggtggatttccttctctcagtgattggctatgctgtggac
ctgggcaatgtctggcgcttcccctacatatgttaccagaatggagggggggcattcctc
ctcccctacaccatcatggccatttttgggggaatcccgctcttttacatggagctcgca
ctgggacagtaccaccgaaatggatgcatttcaatatggaggaaaatctgcccgattttc
aaagggattggttatgccatctgcatcattgccttttacattgcttcctactacaacacc
atcatggcctgggcgctgtactacctcatctcctccttcacggaccagctgccctggacc
agctgcaagaactcctggaacactggcaactgcaccaattacttctccgagggcaacatc
acctggaccctccattccacgtcccctgctgaagaattttacacgcgccacgtcctgcag
atccaccggtctaaggggctccaggacctggggggcatcagctggcagctggccctctgc
atcatgctgatcttcactgttatctacttcagcatctggaaaggcgtcaagacctctggc
aaggtggtgtgggtgacagccaccttcccttatatcatcctttctgtcctgctggtgagg
ggtgccaccctccctggagcctggaggggtgttctcttctacttgaaacccaattggcag
aaactcctggagacaggggtgtggatagatgcagccgctcagatcttcttctctcttggt
ccgggctttggggtcctgctggcttttgctagctacaacaagttcaacaacaactgctac
caagatgccctggtgaccagcgtggtgaactgcatgacgagcttcgtttcgggatttgtc
atcttcacagtgctcggttacatggctgagatgaggaatgaagatgtgtctgaggtggcc
aaagacgcaggtcccagcctcctcttcatcacgtatgcagaagcgatagccaacatgcca
gcgtccactttctttgccatcatcttctttctgatgttaatcacgctgggcttggacagc
acgtttgcaggcttggagggggtgatcacagctgtgctggatgagttcccacacatctgg
gccaagcgccgggagtggtttgtgctcgccgtggtcatcacctgcttctttggatccctg
gtcaccctgacttttggaggggcctacgtggtgaagctgctggaggagtatgccacgggg
cccgcagtgctcactgtcgcgctgatcgaagcagtcgctgtgtcttggttctatggcatc
actcagttctgcagggacgtgaaggaaatgctcggcttcagcccggggtggttctggagg
atctgctgggtggccatcagccctctgtttctcctgttcatcatttgcagttttctgatg
agcccgccacaactacgacttttccaatataattatccttactggagtatcatcttgggt
tactgcataggaacctcatctttcatttgcatccccacatatatagcttatcggttgatc
atcactccagggacatttaaggagcgtattattaaaagtattaccccggaaacaccaaca
gaaattccttgtggggacatccgcttgaatgctgtgtaa
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