KEGG   Pan troglodytes (chimpanzee): 468545
Entry
468545            CDS       T01005                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    468545 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ptr04131]
    468545 (WDR7)
Membrane trafficking [BR:ptr04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    468545 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta CFAP251_N Beta-prop_EML WDR55 EIF3I ASA1 Beta-prop_VPS8 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_ACSF4 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_SCAP PAC11 WDR90_beta-prop_4th Beta-prop_WDR19_1st WDR72_alpha-sol PEP5_VPS11_N Ge1_WD40 Tricorn_2nd PD40 Arminin
Other DBs
NCBI-GeneID: 468545
NCBI-ProteinID: XP_009432334
Ensembl: ENSPTRG00000010042
VGNC: 5223
LinkDB
Position
17:66711428..67088824
AA seq 1508 aa
MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGATIVTGCHDGQICLWDLSVELEINPRALL
FGHTASITCLSKACASSDKQYIVSASESGEMCLWDVSDGRCIEFTKLACTHTGIQFYQFS
VGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
SVTGILKVWIVTSEISDMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDV
GKAVENLIPPVQHSLLDRKDKELLICPPVTRFFYGCREYFHKLLIQGDSSGRLNIWNISD
TADKQESEEGLAMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHHKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEY
RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
GGHMSLMLPGYNQPACKLSHGKTEVGRKLPASEGVGKGTYGVSRAVTTQHLLSIISLANT
LMSMTNATFIGDHMKKGPTRPPRPSTPDLSKSRGSPPTSSNIVQGQIKQETAVLQFSPLY
FFSFPLQVAAPVVSARSDADHSGSDPASAPALHTCFLVNEGWSQLAAMHCVMLPDLLGLD
KFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYIDHVI
SPGVTSEAMQTITTAPDASGPEAKVQEEEHDLVDDDITTGCLSSVPQMKKISTSYEERRK
QATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFL
LLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMG
LPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQNMHTTTLARA
KGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYY
ERNHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFW
QMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSHNALKLARLIWTSNRNVILMAHD
GKEHRFMV
NT seq 4527 nt   +upstreamnt  +downstreamnt
atggcaggaaacagccttgttctacccattgttctttggggtcgaaaagcgcccacacat
tgcatctcagcggtacttttaacagatgatggggccacgatcgtaacaggatgccacgac
ggacaaatatgtctctgggatctttcagtagaactggaaattaatcctcgagcactgttg
tttggtcatacagcatcaatcacttgtttgtctaaagcttgtgcttccagtgacaaacag
tatattgtgagtgcgtctgaaagtggggagatgtgcctctgggacgtgagtgatggcaga
tgtattgaatttacaaaattagcttgcacacatactggcatacagttctaccagttctct
gttgggaatcagcgagaaggaaggcttttatgccacggacattaccctgaaatccttgtt
gtggatgctaccagccttgaagtattatactccttagtatcaaagatatcaccagactgg
attagctccatgagtattattcgatcccaccgaacacaagaggacacagtggtagcactc
tcggtgactggcatcctgaaggtctggattgttacctcggaaataagtgacatgcaggat
actgagccaatatttgaggaggaatccaaaccaatttattgtcagaattgccaaagcatc
tctttttgtgcatttacacaaaggtcacttttggttgtgtgttccaaatattggagggtg
ttcgatgccggagactattccttgttgtgttcaggtcctagtgaaaatggacagacatgg
accggcggggactttgtctcagcagataaagttatcatttggacagaaaatgggcaaagt
tatatttacaaactacctgccagttgccttccggctagtgattcattccgcagtgatgtg
gggaaagcagttgaaaatttaattccccctgtacaacatagcctcttggatcgaaaagat
aaagagttgctaatttgtcctcctgttactcggttcttctatggatgcagagaatatttc
cataaactattaattcagggtgattcttctggaaggttgaatatttggaacatatcagac
acagctgataaacaggaaagtgaagaagggctggcaatgacaacttctattagtttgcaa
gaggcatttgataaactgaatccttgtcctgctggaattatagatcagctgagtgtgatt
cccaatagtaatgaacctcttaaagtaactgcaagtgtgtacataccagcacatggacga
cttgtttgtggtcgtgaagatggaagcatagttattgtacctgccacacagacggccata
gtacagctgttgcaaggggaacacatgctcagaagaggttggccacctcacagaacactc
cgtggtcatcggaacaaagtcacgtgtttgctatatcctcatcaggtctcagctcggtat
gatcaaagatacctgatatctggaggtgtggatttttcagtcataatttgggacatattt
tctggagaaatgaaacatatcttctgtgttcatggtggtgagattactcaacttctagtt
ccacctgaaaactgtagtgcaagagtacagcactgcatctgctctgtagccagtgaccac
tcagtaggacttctaagtttgcgagagaaaaaatgcataatgttggcatctcgtcacctt
tttcctattcaagtaatcaaatggaggccttctgatgattacctggtggtggggtgttca
gatggttctgtgtacgtctggcaaatggatactggtgcattggatcgttgtgtgatgggg
ataacagcggttgagattctaaacgcttgtgatgaagctgttcctgctgctgttgattca
cttagtcatccagcagtcaacctaaaacaagctatgacgagacgtagtcttgctgctctt
aaaaatatggcccatcataagctacaaacccttgcaactaacctcttggcttctgaggca
tctgacaagggaaatttacctaaatattctcataactccctgatggttcaagcaataaag
acaaacctaacagacccggacatacatgtgctattctttgatgtggaagcgttgattatt
caactcctgactgaagaagcctctaggccgaatactgctcttatttccccagagaatttg
caaaaagcatctggcagttcagacaaagggggctcttttttaactggaaaacgagcagca
gttctcttccaacaagtgaaagaaacgatcaaagagaacatcaaggaacacctccttgat
gatgaagaggaggatgaggagataatgaggcagagaagggaagaaagtgatcctgaatat
cggtccagcaaatcaaagccattgaccctattagaatataatttaactatggacactgca
aagctgtttatgtcctgccttcacgcctggggtttgaatgaagtactggatgaagtttgc
ctggatcgccttggaatgctgaaaccccactgcacagtatcgtttggcctcttgtcaaga
ggaggccatatgtcactgatgctgccgggttataatcagcctgcttgtaaactgtcacat
gggaaaacagaagtaggaaggaagctgccagcgtctgagggagtaggaaagggaacttac
ggagtgtcccgtgccgtcaccacacagcatctcctgtctatcatttctttggcaaatact
ttaatgagtatgaccaatgcaacttttattggtgatcatatgaagaagggtcctaccagg
ccacctagaccaagcaccccagacctttctaagtcaaggggttctcctccaacttccagt
aatattgtgcaaggacagattaaacaagaaactgctgtacttcaattctctcctctttac
ttcttctcttttcctctgcaagttgctgcacctgtcgtttccgctcggtctgatgctgat
cactctggctctgaccctgcttctgctcctgctttacatacctgtttcttagtaaatgaa
ggttggagtcagttagctgctatgcactgtgttatgctgccagacctactgggattggat
aaatttaggcctccccttctggagatgctggcccgaagatggcaagatcgatgcttggag
gtgagagaagccgcgcaggccctgcttctggcggaactgagaagaattgagcaggcaggc
aggaaggaagccatcgatgcctgggctccttacttacctcagtacatagaccacgtcata
tcacctggagtcacatcagaagccatgcagactatcaccacggctcctgatgcctcaggg
cctgaagcaaaagtccaggaggaagagcatgaccttgttgatgatgacatcaccactggt
tgcttatcaagtgtcccacaaatgaaaaaaatttctacatcttatgaggaaagacggaag
caagctactgctattgttttacttggagtaataggagctgaatttggtgctgaaattgaa
cctcctaaactattgaccagacctcgaagctctagccaaattcctgagggattcgggttg
actagtggtggatccaactactcgctggccagacatacttgcaaggcactgacgtttctt
ctgctacagcctccaagccccaaacttcctccacacagcactatccgaagaacagccatt
gatctgattggacgtgggttcactgtttgggagccttacatggatgtgtccgctgttctg
atggggcttctcgaactttgtgccgatgccgagaaacaacttgccaacatcacaatgggg
ttgcctctgagcccagcagctgactcggcccgctctgcgaggcatgccctctcgctcatt
gccaccgccagaccacccgccttcatcaccaccatagccaaagaggtacacagacatacg
gctcttgcagcaaatacccaatcacagcagaatatgcacacaacaactcttgcacgagct
aaaggggaaattctgagagtcattgaaattcttattgaaaagatgcccacagatgttgtg
gatcttctcgtggaggttatggacatcattatgtactgccttgaaggatctctagttaaa
aagaaaggtcttcaggaatgtttcccagccatctgcaggttctacatggtcagctattat
gagcggaatcaccgaatagcagttggagctcgccatggttcagtggccctgtacgacatc
cggacgggaaaatgtcagacaatccatggacacaagggaccaatcactgcagtggctttt
gctcctgatggaagatatcttgccacctactcaaacactgacagccacatttctttttgg
cagatgaacacgtcactgctgggaagcatcggcatgctgaactcggcacctcagctgcgc
tgtattaaaacctaccaggtgccccctgtgcagcccgcgtcccccggctcccacaatgcc
ctcaagctggcccggctcatctggacttccaaccgcaacgtcatcctcatggcccatgac
gggaaggagcaccgcttcatggtctaa

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