Pan troglodytes (chimpanzee): 468967
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Entry
468967 CDS
T01005
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
468967 (SHANK1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
468967
NCBI-ProteinID:
XP_024207371
Ensembl:
ENSPTRG00000034072
VGNC:
55625
LinkDB
All DBs
Position
20:complement(53547685..53608559)
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AA seq
2169 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGQGSGAPGSLASVRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LFNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGADKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGTGLTVPPALLRANSDTSMALPDWMVFSAPGAASSGAPGPTSGSQGQSQPSAPTTK
LSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQESKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
TISLRSKSMTSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASESPGPGGLASLGKHRPKGFFATESSFDPHHRAQPSYERPSFLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPVPSSSGRLTPSPRGG
PFNPGSGGPLPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQ
PHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGG
GGGSSQGPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSP
TSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPAGGGG
GGGSSPSPAPAMSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQNEARR
RSTLFLSTDAGDEDGGDGGLGTGAAPGPRLRHSKSIDEGMFSAEPYLRLESAGSGAGYGG
YGAGSRAYGGGGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEGGG
APQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKS
LPASPPAARRSLLHRLPPTAPGVGPLLLQLGTEPPAPHPGVSKPWRSAAAEEPERLPLHV
RFLENCQPRAPATSGRGPPSEDGPGVPPPSPRRSVPPSPTSPRASEENGLPLLVLPPPAP
SVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTPAPATPLPPMPPPAVAA
APPTLDSTASSLTSYDSEVATLTQGASAAPGEPPPPGPPAPAAPAPAAPQPGPDPPPGTD
SGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGAGAGVASGPELLDTYVAYL
DGQAFGGSGTPGPPYPPQLMTPSKLRGRALGASGGLRPGPSGGLRDPVTPTSPTVSVTGA
GTDGLLALRACSGPPTAGVAGGPVAVEPEVPSVPLPTASSLPRKLLPWEEGPGPPPPPLP
GPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGASYV
PERTSSLQRQRLSDDSQSSLLSKPVSSLFQNWPKPPLPPLPTGTGVSPTAAAAPGATSPS
ASSSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGL
FDIRGSPTGGAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFGA
KPLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNID
RALKFFLER
NT seq
6510 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgacaagcgaggacgaggaacgccacagtgccagcgagtgtccg
gaggggggctcagagtccgacagctccccagacgggccaggtcgaggcccccgggggacc
cggggccagggcagtggggcacctggtagcctggcctctgttagaggcctccagggtcgc
tcaatgtccgtcccagacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgcctacgcttcaaccccgatgccaccatctggacggccaag
cagcaggtgctctgtgccctgagcgagagcctgcaggatgtgctcaactatggcctgttc
caaccggccacctcaggccgcgatgccaacttcctggaggaggagaggctgctgcgggag
tacccccagtcctttgagaagggggtcccctacctggagttccgatacaagacccgagtt
tacaaacagaccaacctggatgagaagcagctggccaagttgcacacgaagacggggttg
aagaagttcctggagtatgtgcagctcgggacatctgacaaggtggcgcggctgctggac
aaggggctggaccccaattaccatgactcggattcgggagagacccccttgacactggcg
gcccagaccgaaggctctgtagaggtgattcgaaccctgtgcctgggcggggcccacatt
gacttccgggcccgggatggcatgaccgcactgcataaggccgcatgcgcccgacactgc
ctggcactcacggcgctcctggaccttgggggttcccccaactacaaggaccgtcggggg
ctgacccctctgttccacacggccatggtgggtggtgacccccgatgctgcgagctgctc
ctgttcaacagggcccagctgggcatagctgatgagaacggctggcaggaaatccaccag
gcctgccagcggggtcactctcagcacctggagcatctgcttttctatggggctgagcct
ggagcccagaacgcctcggggaacacggctctgcacatctgcgccctctacaacaaggag
acctgtgccaggatcctcctgtatcgaggtgccgacaaggatgtgaagaataacaacgga
cagacccccttccaggtggcagtgattgctgggaattttgagctgggggagctgatccga
aaccaccgagaacaggatgtggtgcccttccaggagtcccccaagtacgcggcccggcga
cgggggcccccaggcacagggctgacggtgcccccggcgctgctgcgggccaacagtgac
accagcatggcgctgcccgactggatggtgttctccgccccaggggccgcgtcctctggg
gcccctggccctacctcagggtcccagggccagtcgcagccctcggcccccaccaccaag
ctcagcagcgggaccctccgaagtgccagcagcccccggggtgccagggcccgctctcca
tcccgagggaggcacccggaggacgccaagaggcagccccgaggccggcccagctccagc
gggacaccccgggaagggccagccgggggcacggggggctcagggggccccgggggctcc
ctgggcagccgcgggaggcggaggaagctctactcagcagtacccggacgctccttcatg
gctgtgaagtcctaccaggcccaagccgagggggagatctccctgagcaagggcgagaag
atcaaagtacttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgtgtt
ggctggttcccctctgactgcctggaagaagtggcgaatcgctctcaggagagcaagcaa
gaaagccgcagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcttaatggatgggattggcccagggagcgattacatcattaag
gagaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcgctgcag
tacctggagtcggtggatgagggtggcgtggcatggcgagctggactgcgaatgggagac
ttcctcatcgaggtgaacgggcagaatgtggtgaaggtcggccaccgacaggtggtgaac
atgatccgccaagggggcaacacgctgatggtgaaggtggtgatggtcaccaggcacccg
gacatggatgaggcagtgcacaagaaagcaccccagcaggccaagcggctgccgccccca
accatctccctgcgttccaaatctatgacctcagagctggaggagatggtctccccctgg
aagaagaagagtgagtacgagcagcagccggcgccggtgcccagcatggagaaaaagcgg
accgtgtatcagatggctctcaacaaactggacgaaatcctggccgcagctcaacagacc
atcagtgcaagcgagagccctggtcccggtggcctcgcgtccctgggcaaacaccgaccc
aaaggtttctttgccactgagtcgagcttcgatccccaccaccgtgcccagccaagttac
gagcgtccttctttcctgcctccaggacctgggttgatgctccggcaaaaatctatcggt
gcggcagaagatgacagaccttacctagcacccccagccatgaaattcagccgcagcctg
tctgtgcctggttcggaggacattcccccgccacccaccacgtccccaccggagcctccc
tacagcacacctccagtcccctcctcctcagggcgcctcaccccctcccctcggggaggg
cccttcaaccctggctctggtggccccctccccgcctcctcccctgcatcctttgacggg
ccctcccctcccgacactcgcgtggggagccgcgagaagagcctgtaccacagtgggccc
ctgcccccggcccaccaccacccgccccaccaccaccaccaccacgccccgccccctcag
ccccaccaccaccacgcccacccccctcatcctcccgagatggagacaggcggctctccc
gacgaccctccaccccgcctggctctggggccccagcccagcctgcgaggctggaggggc
ggcgggcccagcccgaccccgggggccccgtccccatcgcaccacggcagcgcgggcggg
ggcggcggctcctcccagggcccggctctacgctatttccagctgcccccgcgggcggcc
agcgcagccatgtacgtgcccgcccgctcgggccgcggccgcaagggcccgctggtcaag
cagaccaaggtggaaggcgagccccagaagggcggcggcctcccgcccgcgccgtcgccc
acgtccccggcctccccgcagccgccgcccgccgtggccgcgccctcggagaagaactcc
atccccatccccaccatcatcatcaaggccccgtccaccagtagcagcggccgcagcagc
cagggcagcagcaccgaggcggagccccccacccagcccgagcccgcgggaggcggcggc
ggcggcggctcctcgcccagccccgccccggccatgtcacccgtgcccccgtccccctcg
cccgtgcccacccccgcctcgcccagcggcccggccacgctggacttcacgagccagttc
ggggccgccctggtgggggcggcccggagggaggggggctggcagaatgaggcgcgccgg
cgctccacgctgttcctgtccaccgacgcgggggacgaggacggcggggacggcgggctg
ggcacaggggcggccccgggcccgcggctgcgccactccaaatccatcgacgagggcatg
ttctccgccgagccctacctccgactggagtctgcgggcagcggcgcgggctacggcggc
tacggggccggtagccgagcctacgggggtggcgggggcagcagcgccttcaccagcttc
ctgcccccgcgacccctggtgcacccgctgaccggcaaggccctggatcccgcctccccg
ctggggctggccctggccgcccgcgagcgagcgctgaaggagtcctcggagggcggcggg
gccccccagccccctcccaggcccccatcgccccgctacgaggccccgccgcccaccccg
caccaccactcgccccacgcccaccacgagccagtgctgcgtctctggggggcctccccg
ccggaccctgcgcgccgggagctggggtacagggccgggctgggcagccaagagaagtcc
cttcccgccagcccgcccgccgcccggcgttccctgctacaccgcctgccgcccaccgct
cccggggtggggcccctcctgctgcagctggggacggagcccccggccccgcaccccgga
gtgagcaagccctggaggtccgcagccgccgaagaacccgagcggctgccgctgcacgtg
cggttccttgaaaactgccagccccgggcccctgcgacgagcggaaggggtcccccctcg
gaggacgggccgggggtcccgccgcccagcccacgccggtccgttcccccctccccgacc
tccccgagggccagcgaagagaacgggctgcccctgctggtcctgccgcctcccgccccc
tcggtggatgtggaagatggcgaattccttttcgtggaaccgctgcctccgcctctggaa
ttctccaacagcttcgaaaagccagagtcgcccctcacgcctgggcctccccacccgctg
cccgacacacctgccccggccaccccgttaccccctatgccacccccggctgtggccgca
gcccctcccaccctggactccaccgcatccagcctgacatcctatgacagcgaggtggcc
accctgacccagggggcctccgccgctcctggggaaccccctccaccaggcccgcctgcc
ccagcagcaccggctcccgctgccccacagcctggcccggaccctccgcctggcacggat
tctggcatcgaggaggtggacagtcggagcagtagtgaccacccactggagaccatcagc
agcgcctccacgctgagcagcctatctgccgaaggtggtggcagcgcagggggtgggggc
ggggctggggccggtgtggccagtgggccggagcttctggacacctatgtggcctacctg
gacggccaggcctttgggggcagcggtactcccggcccgccataccctcctcagctcatg
actccctctaagctccggggccgggcgctaggagccagcggaggcctgcggcctggcccc
agcgggggactccgagaccctgttacccccaccagccccaccgtctcggtgacaggggct
ggaaccgatgggctgctggccctgcgtgcttgttcaggaccccccacggcaggcgtggct
gggggtccggtggctgtagagccagaagtcccatcggtgcccttgccgacggcctcctct
ctgcctcggaagctgctgccctgggaggagggcccgggcccaccgccaccacctctgccc
gggcccttggcccagcctcaggcctcagccttggccacagtaaaagccagcatcatcagt
gaactcagctccaagcttcagcagtttgggggctcctcggcagctggcggcgctctgccc
tgggcccgaggaggcagcgggggaagcggagacagccaccacgggggagccagctatgtc
cccgagaggacctcctccctgcagcggcagagactctccgacgactcccagtcctcactc
ctctccaagcctgtcagcagcctgtttcagaactggcccaaaccacctctgccgccgctc
cccaccggaacaggggtctcccctacagccgctgcggccccaggggccacctcaccctca
gcctcctcctcctccacgtccacccgccacctccagggcgtggagttcgagatgcggccc
cctctgctccgccgggccccgagcccctcgctgctgcccgcctcggagcacaaggtcagc
cctgcgcccaggccctcgtccctgcccatcctgccttccggacccctctacccaggcctc
tttgacatccgtggctccccaactggaggggcaggaggctcggctgaccccttcgcccca
gtctttgtgccgccacacccggggatatccggggggctcgggggagccttgtcaggggcc
tcgcgctccctctcaccgacccgcctgctctcgctgcccccggacaagccgtttggcgct
aaacctctggggttctggaccaagttcgacgtggctgattggctggagtggctgggtttg
gcggagcaccgagcccagttcctggaccacgagatcgatggctcccacctgcccgccttg
accaaggaggactacgtcgatctaggtgtgaccagggtgggccaccgcatgaacatcgac
cgggctctcaaattcttcctggagaggtga
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