KEGG   Pan troglodytes (chimpanzee): 469594
Entry
469594            CDS       T01005                                 
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X2
  KO
K06252  tenascin
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr04151  PI3K-Akt signaling pathway
ptr04510  Focal adhesion
ptr04512  ECM-receptor interaction
ptr04518  Integrin signaling
ptr05165  Human papillomavirus infection
ptr05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    469594 (TNR)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    469594 (TNR)
   04518 Integrin signaling
    469594 (TNR)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    469594 (TNR)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    469594 (TNR)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    469594 (TNR)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ptr00536]
    469594 (TNR)
Glycosaminoglycan binding proteins [BR:ptr00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   469594 (TNR)
SSDB
Motif
Pfam: fn3 Fibrinogen_C FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Pur_ac_phosph_N Fn3_PBP1 Fn3_VIN3 FN3_Tor_3rd Uroplakin_II
Other DBs
NCBI-GeneID: 469594
NCBI-ProteinID: XP_024205977
Ensembl: ENSPTRG00000001709
VGNC: 1694
LinkDB
Position
1:73347866..73778026
AA seq 1025 aa
MPAVGEDNVRRGSASVKRATRALTAQQPTALGGLQLQQRVPGDWSGVTITELEPGLTYNI
SVYAVISNILSLPITAKVATHLSTPQGLQFKTITETTVEVQWEPFSFSFDGWEISFIPKN
NEGGVIAQVPSDVTSFNQTGLKPGEEYIVNVVALKEQARSPPTSASVSTVIDGPTQILVR
DVSDTVAFVEWIPPRAKVDFILLKYGLVGGEGGRTTFRLQPPLSQYSVQALRPGSRYEVS
VSAVRGTNESDSATTQFTTEIDAPKNLRVGSRTATSLDLEWDNSEAEVQEYKVVYSTLAG
EQYHEVLVPKGIGPTTRATLADLVPGTEYGVGISAVMNSQQSVPATMNARTELDSPRDLM
VTASSETSISLIWTKASGPIDHYRITFTPSSGIASEVTVPKDRTSYTLTDLEPGAEYIIS
VTAERGRQQSLESTVDAFTGFRPISHLHFSHVTSSSVNITWSDPSPPADRLILNYSPRDE
EEEMMEVSLDATKRHAVLMGLQPATEYIVNLVAVHGTVTSEPIVGSITTGIDPPKDITIS
NVTKDSVMVSWSPPVASFDYYRVSYRPTQVGRLDSSVVPNTVTEFTITRLNPATEYEISL
NSVRGREESERICTLVHTAMDNPVDLIATNITPTEALLQWKAPVGEVENYVIVLTHFAVA
GETILVDGVSEEFRLVDLLPSTHYTATMYATNGPLTSGTISTNFSTLLDPPANLTASDVT
RQSALISWQPPRAEIENYVLTYKSTDGSRKELIVDAEDTWIRLEGLLENTDYTVLLQAAQ
DTTWSSITSTAFTTGGRVFPHPQDCAQHLMNGDTLSGVYPIFLNGELSQKLQVYCDMTTD
GGGWIVFQRRQNGQTDFFRKWADYRVGFGNLEDEFWLGLDNIHRITSQGRYELRVDMRDG
QEAAFASYDRFSVEDSRNLYKLRIGSYNGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMS
YKGAWWYKNCHRTNLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPYNHRLMAGRKR
QSLQF
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgcctgcagtgggcgaggacaatgtgaggaggggctctgcgtctgtgaagagggctacc
agggccctgactgctcagcagccgacggccctggggggcctccagctccagcagcgggtg
cctggagattggagtggtgtcaccatcacggagctggagccaggtctcacctacaacatc
agcgtctacgctgtcattagcaacatcctcagccttcccatcactgccaaggtggccacc
catctctccactcctcaagggctacaatttaagacgatcacagagaccaccgtggaggtg
cagtgggagcccttctcattttccttcgatgggtgggaaatcagcttcattccaaagaac
aatgaagggggagtgattgctcaggtccccagcgatgttacgtcatttaaccagacagga
ctaaagcctggagaggaatacattgtcaatgtggtggctctgaaagaacaggcccgcagc
ccccctacctcggccagcgtctccacagtcattgacggccccacgcagatcctggttcga
gatgtctcggacaccgtggcttttgtggagtggattccccctcgagccaaagtcgatttc
attcttttgaaatatggcctggtgggcggggaaggtgggaggaccaccttccggctgcag
cctcccctgagccaatactcagtgcaggccctgcggcctggctcccgctacgaggtgtca
gtcagtgccgtccgagggaccaacgagagcgattctgccaccactcagttcacaacagag
atcgatgcccccaagaacttgcgagttggttctcgcacagcaaccagccttgacctcgag
tgggataacagtgaagccgaagttcaggagtacaaggttgtgtacagcaccctggcgggt
gagcaatatcatgaggtactggtccccaagggcattggtccaaccaccagggccacccta
gcagatctggtacctggcactgagtatggagttggaatatctgccgtcatgaactcacag
caaagcgtgccagccaccatgaatgccaggactgaacttgacagtccccgagacctcatg
gtgacagcctcctcggagacctccatctccctcatctggaccaaggccagtggccctatt
gaccactaccgaattacctttaccccatcctctgggattgcctcagaagtcaccgtaccc
aaggacaggacctcgtacacactaacagatctagagcctggggcagagtatatcatttcc
gtcactgctgagaggggtcggcagcagagcttggagtccactgtggatgctttcacaggc
ttccgtcccatctctcatctgcacttttctcatgtgacctcctccagtgtgaacatcact
tggagtgatccatctcccccagcagacagactcattcttaactacagccccagggatgag
gaggaagagatgatggaggtctccctggatgccaccaagaggcatgctgtcctgatgggc
ttgcaaccagccacagagtatattgtgaaccttgtggctgtccatggcacagtgacctct
gagcctattgtgggctccatcaccacaggaattgatcccccaaaagacatcacaattagc
aatgtgaccaaggactcagtgatggtctcctggagccctcctgttgcatctttcgattac
taccgagtatcatatcgacccacccaagtgggacgactagacagctcagtggtgcccaac
actgtgacagaattcaccatcaccaggctgaacccagctaccgaatacgaaatcagcctc
aacagcgtgcggggcagggaggaaagcgagcgcatctgtactcttgtgcacacagccatg
gacaaccctgtggatctgattgctaccaatatcactccaacagaagccctgctgcagtgg
aaggcaccagtgggtgaggtggagaactacgtcattgttcttacacactttgcagtcgct
ggagagaccatccttgttgacggagtcagtgaggaatttcggcttgttgacctgcttcct
agcacccactatactgccaccatgtatgccaccaatgggcctctcaccagtggcaccatc
agcaccaacttttctactctcctggaccctccggcaaacctgacagccagtgatgtcacc
agacaaagtgccctgatctcctggcagcctcccagggcagagattgaaaattatgtcttg
acctacaaatccaccgacggaagccgcaaggagctgattgtggatgcagaagacacctgg
attcgactggagggcctgttggagaacacagactacacggtgctcctgcaggcagcacag
gacaccacgtggagcagcatcacctccaccgctttcaccacagggggccgggtgttccct
catccccaagactgtgcccagcatttgatgaatggagacactttgagtggggtttacccc
atcttcctcaatggggagctgagccagaaattacaagtgtactgtgatatgaccaccgat
gggggcggctggattgtattccagaggcggcagaatggccaaactgattttttccggaaa
tgggctgattaccgtgttggcttcgggaacctggaggatgagttctggctggggctggac
aatatacacaggatcacatcccagggccgctatgagctgcgcgtggacatgcgggatggc
caggaggccgccttcgcctcctacgacaggttctctgtcgaggacagcagaaacctgtac
aaactccgcataggaagctacaacggcactgcgggggactccctcagctatcatcaagga
cgccctttctccacagaggatagagacaatgatgttgcagtgactaactgtgccatgtcg
tacaagggagcatggtggtataagaactgccaccggaccaacctcaatgggaagtacggg
gagtccaggcacagtcagggcatcaactggtaccattggaaaggccatgagttctccatc
ccctttgtggaaatgaagatgcgcccctacaaccaccgtctcatggcagggagaaaacgg
cagtccttacagttctga

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