KEGG   Pan troglodytes (chimpanzee): 469982
Entry
469982            CDS       T01005                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor RAE1 isoform X1
  KO
K14298  mRNA export factor
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03013  Nucleocytoplasmic transport
ptr05014  Amyotrophic lateral sclerosis
ptr05164  Influenza A
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    469982 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    469982 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    469982 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    469982 (RAE1)
   03036 Chromosome and associated proteins [BR:ptr03036]
    469982 (RAE1)
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     469982 (RAE1)
Chromosome and associated proteins [BR:ptr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    469982 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th PepSY
Other DBs
NCBI-GeneID: 469982
NCBI-ProteinID: XP_016792681
Ensembl: ENSPTRG00000013658
VGNC: 6253
UniProt: K7AWN8
LinkDB
Position
21:63641659..63668892
AA seq 368 aa
MSLFGTTSGFGTSGTSMFGSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagcctgtttggaacaacctcaggttttggaaccagtgggaccagcatgtttggcagt
gcaaccacagacaatcacaatccaatgaaggatattgaagtaacatcatctcctgatgat
agcattggttgtctgtcttttagcccaccaaccttgccggggaactttcttattgcagga
tcatgggctaatgatgttcgctgctgggaagttcaagacagtggacagaccattccaaaa
gcccagcagatgcacactgggcctgtgctcgatgtctgctggagtgacgatgggagcaaa
gtatttacggcatcgtgtgataaaactgccaaaatgtgggacctcagcagtaaccaagca
atacagatcgcacagcatgatgctcctgttaaaaccatccattggatcaaagctccaaac
tacagctgtgtgatgactgggagctgggataagactttaaagttttgggatactcgatcg
tcaaatcctatgatggttttgcaactccctgaaaggtgttactgtgctgacgtgatatac
cccatggctgtggtggcaactgcagagaggggcctgattgtctatcagctagagaatcaa
ccttctgaattcaggaggatagaatctccactgaaacatcagcatcggtgtgtggctatt
tttaaagacaaacagaacaagcctactggttttgccctgggaagtatcgaggggagagtt
gctattcactatatcaaccccccgaaccccgccaaagataacttcacctttaaatgtcat
cgatctaatggaaccaacacttcagctcctcaggacatttatgcggtaaatggaatcgcg
ttccatcctgttcatggcacccttgcaactgtgggatctgatggtagattcagcttctgg
gacaaagatgccagaacaaaactaaaaacttcggaacagttagatcagcccatctcagct
tgctgtttcaatcacaatggaaacatatttgcgtacgcttccagctacgactggtcaaag
ggacatgaattttataatccccagaaaaaaaattacattttcctgcgtaatgcagccgaa
gagctaaagcccaggaataagaagtag

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