Pan troglodytes (chimpanzee): 470008
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Entry
470008 CDS
T01005
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
470008 (SOX18)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
470008 (SOX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
470008
NCBI-ProteinID:
XP_016793774
Ensembl:
ENSPTRG00000030459
VGNC:
6269
UniProt:
H2QKU0
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All DBs
Position
21:complement(70392146..70394070)
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AA seq
381 aa
AA seq
DB search
MQRSPPGYGAQDDPPARRDCAWAPGHGAAADTRGLAAVPAALAAPASPPSPQRSPPRSPE
PGRYGLSPAGRGERQAADESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAW
KELNAAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKKQARKARRLEPGLLLPGLAPPQPP
PEPFPAASGSARAFRELPPLGAEFDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDCALR
PFRAPYAPTELSRDPGGCYGAPLAEALRTAPPAAPLAGLYYGTLGTPGPYPGPLSPPPEA
PPLESAEPLGPAADLWADVDLTEFDQYLNCSRTRPDAPGLPYHVALAKLGPRAMSCPEES
SLISALSDASSAVYYSACISG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcgccgcccggctacggcgcacaggacgacccgcccgcccgccgcgactgt
gcatgggccccgggacacggggccgccgctgacacgcgcggcctcgccgccgtccccgcc
gccctcgccgcgcccgcctcgccgcccagcccgcagcgcagtccgccgcgcagccccgag
ccggggcgctatggcctcagcccggccggccgcggggaacgccaagcggcagacgagtcg
cgcatccggcggcccatgaacgccttcatggtgtgggcaaaggacgagcgcaagcggctg
gctcagcagaacccggacctgcacaacgcggtgctcagcaagatgctgggcaaagcgtgg
aaggagctgaacgcggcagagaagcggcccttcgtggaggaagccgaacggctgcgcgtg
cagcacttgcgcgaccaccccaactacaagtaccggccgcgccgcaagaagcaggcgcgc
aaggcccggcggctggagcccggcctcctgctcccgggattagcgcccccgcagccaccg
cccgagcctttccccgcggcgtctggctcggctcgcgccttccgcgagctgcccccgctg
ggcgccgagttcgacggcctggggctgcccacgcccgagcgctcgcctctggacggcctg
gagcccggcgaggctgccttcttcccaccgcccgcggcgcccgaggactgcgcgctgcgg
cccttccgcgcgccctacgcgcccaccgagttgtcgcgggaccccggcggttgctacggg
gctcccctggcggaggcgctcaggaccgcgccccccgcggcgccgctcgctggcctgtac
tacggcaccctgggcacgcccggcccgtaccccggcccgctgtcgccgccgcccgaggcc
ccgccgctggagagcgccgagccgctggggcccgccgccgatctgtgggccgacgtggac
ctcaccgagttcgaccagtacctcaactgcagccggactcggcccgacgcccccgggctc
ccgtaccacgtggcactagccaaactgggcccgcgcgccatgtcctgcccagaggagagc
agcctgatctccgcgctgtcggacgccagcagcgcggtctattacagcgcgtgcatctcc
ggctag
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integrated database retrieval system