Pan troglodytes (chimpanzee): 470638
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Entry
470638 CDS
T01005
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X3
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
470638 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
470638 (BARD1)
04121 Ubiquitin system [BR:
ptr04121
]
470638 (BARD1)
03036 Chromosome and associated proteins [BR:
ptr03036
]
470638 (BARD1)
03400 DNA repair and recombination proteins [BR:
ptr03400
]
470638 (BARD1)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
470638 (BARD1)
Ubiquitin system [BR:
ptr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
470638 (BARD1)
Chromosome and associated proteins [BR:
ptr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
470638 (BARD1)
DNA repair and recombination proteins [BR:
ptr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
470638 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
BRCT
BRCT_2
ANK_LRRK2
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
470638
NCBI-ProteinID:
XP_054535295
Ensembl:
ENSPTRG00000012888
VGNC:
10583
LinkDB
All DBs
Position
13:complement(116984370..117068587)
Genome browser
AA seq
680 aa
AA seq
DB search
MVAVPGPTVAPRSTAWRSCCAARVDLKEDKPRKSLFNDAGNKKNSIKMWFSPRSKKVRYV
VSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERAKKASARSGKKQKKKTLAEINQK
WNLEAEKEDGEFDSKEESKQKLVSFCSQPSVISSPQINGEIDLLASGSLTESECFGSLTE
VSLPLAEQIESPDTKSRNEVVTPEKVCKNYLTSKKSLPLENNGKRGHHSRLSSPISKRCR
TSILSTSGDFVKQTVPSENIPLPECSSPPSCKRKVGGTSGRKNSNMSDEFISLSPGTPPS
TLSSSSYRRVMSSPSAVKLLPNMAVKRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVK
DHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYG
ASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESSSASHCSVMNTGQRRDGPLVLIGSGL
SSEQQKMLSELAAILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVK
ACLRRKVCEQEEKYEIPEGPRRSRLNREQLLPKLFDGCYFYLWGTFKHHPKDNLIKLVTA
GGGQILSRKPKPDSDVTQTMNTVAYHARPDSDQRFCTQYIIYEDLCNYHPERVRQGKVWK
APSSWFIDCVMSFELLPLDS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcggtgcctgggcccacagtcgcgccgcgctcgaccgcctggagaagctgctgc
gctgctcgcgttgatttgaaagaagataaacctaggaaaagtttgtttaatgatgcagga
aacaagaagaattcaattaaaatgtggtttagccctcgaagtaagaaagtcagatatgtt
gtgagtaaagcttcagtgcaaacccagcctgcaataaaaaaagatgcaagtgctcagcaa
gactcatatgaatttgtttccccaagtcctcctgcagatgtttctgagagggctaaaaag
gcttctgcaagatctggaaaaaagcaaaaaaagaaaactttagctgaaatcaaccaaaaa
tggaatttagaggcagaaaaagaagatggtgaatttgactccaaagaggaatctaagcaa
aagctggtatccttctgtagccaaccatctgttatctccagtcctcagataaatggtgaa
atagacttactagcaagtgggtccttgacagaatctgaatgttttggaagtttaactgaa
gtctctttaccattggctgagcaaatagagtctccagacactaagagcaggaatgaagta
gtgactcctgagaaggtctgcaaaaattatcttacatctaagaaatctttgccattagaa
aataatggaaaacgtggccatcacagtagactttccagtcccatttctaagagatgtaga
accagcattctgagcaccagtggagattttgttaagcaaacggtgccctcagaaaatata
ccattgcctgaatgttcttcaccaccttcatgcaaacgtaaagttggtggtacatcaggg
aggaaaaacagtaatatgtccgatgaattcattagtctttcaccaggtacaccaccttct
acattaagtagttcaagttacaggcgagtgatgtctagtccctcagcagtgaagctgttg
cccaatatggctgtgaaaagaaatcatagaggagagactttgctccatattgcttctatt
aagggcgacataccttctgttgaataccttttacaaaatggaagtgatccaaatgttaaa
gaccatgctggatggacaccattgcatgaagcttgcaatcatgggcacctgaaggtagtg
gaattattgctccagcataaggcattggtgaacaccaccgggtatcaaaatgactcacca
cttcacgatgcagccaagaatgggcatgtggatatagtcaagctgttactttcctatgga
gcctccagaaatgctgttaatatatttggtctgcggcctgtcgattatacagacgatgaa
agtatgaaatcgctattgctgctaccagagaagaatgaatcatcctcagctagccactgc
tcagtaatgaacactgggcagcgtagggatggacctcttgtacttataggcagtgggctg
tcttcagaacaacagaaaatgctcagtgagcttgcagcaattcttaaggctaaaaaatat
actgaatttgacagtacagtaactcatgttgttgttcctggtgatgcagttcaaagtacc
ttgaagtgtatgcttgggattctcaatggatgctggattctaaaatttgaatgggtaaaa
gcatgtctacgaagaaaagtatgtgaacaggaagaaaagtatgaaattcctgaaggtcca
cgcagaagcaggctcaacagagaacagctgttgccaaagctgtttgatggatgctacttc
tatttgtggggaaccttcaaacaccatccaaaggacaaccttattaagctcgtcactgca
ggtgggggccagatcctcagtagaaagcccaagccagacagtgacgtgactcagaccatg
aatacagtcgcataccatgcgagacccgattctgatcagcgcttctgcacacagtatatc
atctatgaagatttgtgtaattatcacccagagagggttcggcagggcaaagtctggaag
gctccttcgagctggttcatagactgtgtgatgtcctttgagttgcttcctcttgacagc
tga
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