Pan troglodytes (chimpanzee): 470780
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Entry
470780 CDS
T01005
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X18
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
470780 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
470780 (CNOT10)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
470780 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
ARM_TT21_N
TPR_12
TPR_19
TPR_8
ARM_TT21
TPR_MalT
TPR_7
TPR_17
DUF6058
Motif
Other DBs
NCBI-GeneID:
470780
NCBI-ProteinID:
XP_001168099
Ensembl:
ENSPTRG00000014722
VGNC:
7038
UniProt:
H2QM90
A0A6D2WWX8
LinkDB
All DBs
Position
2:36702074..36790956
Genome browser
AA seq
717 aa
AA seq
DB search
MAADKPADQGAEKHEGTGQSSGITDQEKELSTNAFQAFTSGNYDACLQHLACLQDINKDD
YKIILNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNETGNNNNKDGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPK
QENGAKNSNQLGGNTESSESSETCRCSILACSAYVALALGDNLMALNHADKLLQQPKLSG
SLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSG
KRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEAILLAV
YLELQNGNTQLALQIIKRNQLLPAVKTHSEVRKKPVFQPVHPIQPIQMPAFTTVQRK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagcctgcagatcagggagcagagaaacatgaaggcacaggtcagtcc
tctgggatcactgatcaagagaaggagttatccaccaatgctttccaagctttcacatct
ggaaattatgatgcctgtctacaacaccttgcctgtctacaagatataaacaaagatgat
tataaaataattttgaatacagcagtagctgagttttttaaaagtaaccaaacaacaaca
gataatttgagacaaacacttaaccagctgaagaatcaggtccactcagctgttgaagaa
atggatggattagatgatgttgaaaacagcatgttgtactataatcaagcagtcattctt
tatcatctgcggcagtatacagaagccatatcagttggtgaaaaactttatcagttcata
gagccttttgaagaaaaatttgcccaagcagtgtgttttttgcttgtagacctgtatata
ttaacctaccaagctgagaaagctttgcatcttcttgctgtcctagaaaaaatgatttca
cagggtaacaataacaaaaatggaaagaatgagactggtaataacaacaacaaagatgga
tctaatcataaagctgaaagtggagctctaatagaagctgcaaaatcaaagatacatcag
tacaaagtacgagcttatatccaaatgaagtctctgaaagcatgtaaaagggaaatcaag
tcagtcatgaatacagctggaaattccgcaccctctctctttcttaaaagcaattttgag
tacttaagaggtaattatcgaaaagccgtgaagctattaaatagttcaaacattgctgag
catccaggattcatgaaaacaggtgaatgcttgagatgcatgttctggaataaccttggt
tgcatccattttgccatgagcaagcacaatttgggaatattctactttaaaaaggctctg
caagagaatgacaatgtctgtgcacagctcagtgcaggtagcactgatccaggtaaaaaa
ttttcaggaagacccatgtgtacgttactaaccaataagagatatgagttgctgtataac
tgtggaattcagcttcttcacattggaaggcctcttgctgccttcgaatgtctgattgaa
gctgttcaggtttatcatgcaaatcctcgcctctggctacggctggctgaatgctgcatt
gctgccaataaggggacttctgaacaagaaactaaaggccttcccagcaaaaaaggaatt
gtacagtctattgttggtcaaggctatcatcgtaaaatagttttggcatcacagtctata
cagaatactgtttataatgatgggcagtcttcggccattcctgtagccagtatggagttt
gcagccatatgtctcagaaatgccttgttgctgctacctgaagaacagcaagatccaaag
caggaaaatggggctaaaaatagtaatcaattaggtgggaacacagagagcagcgaaagc
agtgaaacttgcaggtgctccatacttgcttgcagtgcctacgtggctctggctttgggt
gataacctcatggctttgaatcatgcagataaacttcttcagcagcccaagctgtcagga
tctcttaagtttttgggacatttatatgctgcagaagccctcatctctctcgacagaata
tctgatgccattactcacttgaacccggagaatgtcactgatgtctccttagggatctct
tcaaatgagcaggaccaaggatcagacaaaggtgaaaatgaagcaatggaatcctctggt
aagcgggcccctcagtgctaccccagttccgtcaactctgccaggactgtgatgctgttc
aaccttggcagcgcttactgcctgaggagcgaatatgacaaagcccgaaagtgtctccac
caggcggcttcaatgatccatcctaaagaggtgccccctgaggccatcttgctggcagtc
taccttgaactgcagaatggtaatactcagctggccttacagatcatcaaaaggaatcag
ctgctccctgcagtgaaaacacactctgaagtgagaaagaagccagtgtttcagcctgtc
cacccgatccagcccatccaaatgccggctttcaccactgtgcagagaaagtga
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