Pan troglodytes (chimpanzee): 471319
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Entry
471319 CDS
T01005
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptr04131
]
471319 (LRBA)
Membrane trafficking [BR:
ptr04131
]
Endosome - Lysosome transport
Others
Others
471319 (LRBA)
Endosome - Golgi transport
471319 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
471319 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
SUKH_6
Motif
Other DBs
NCBI-GeneID:
471319
NCBI-ProteinID:
XP_016807842
Ensembl:
ENSPTRG00000023095
VGNC:
10383
LinkDB
All DBs
Position
3:complement(152039691..152801043)
Genome browser
AA seq
2868 aa
AA seq
DB search
MASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIRGIRMKFAVLTGLVEVGEV
SNRDIVETVFNLLVGGQFDLEMNFIIQEGESINCMVDLLEKCDITCQAEVWSMFTAILKK
SIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK
GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFT
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF
AQLDYRQYLSDEIDLTICSTLLAFVMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV
SRAVLELCLAFSKYLSNLQNGMPLLKQLCDHVLLNPAIWIHTPAKVQLMLYTYLSTEFIG
TVNIYNTIRRVGTVLLIMHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEMLSLRAFLLM
FIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG
LRVIYKLLASKSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLIT
MTTYNVLFEILIEQIGTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESMEVHR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH
AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFREQQGKVDEEIGLCSSTSVQAASG
IRRDINVSVGSQQPDTKDSPVCPHFTTNGNENSSIEKTSSLESASNIELQTTNTSYEEMK
AEQENQELPVEGTLEETLTNETRNADDLEVSSDIIEAVTISSNSFITTGKDSMTVSEVTA
SISSPSEEDASEMPEFLDKSIVEEEEDDDYVELKVEGSPTEEANLPTELQDNSLSPAASE
AGEKLDMFGNDHKLIFQEGKPVTEKQTDTETQDSKDSGIQTMTASGSSAVSPETTVSQIA
VESDLGQMLEEGKKATNLTRETKLINDCHGSVSEASSEQKIAKLDVSNVATDTERLELKA
SPNVEAPQPHRHVLEISRQHEQPGQGIAPDAVNGQRRDSRSTMFRIPEFNWSQMHQRLLT
DLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPLLS
AATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKSMSSGGIL
RQCLRLVCAVAVRNCLECQQHSQLKTRGDKALKPMHSLIPLGKSAAKSPVDIVTGGISPV
RDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERHS
QSCTETGSENENVSLSEITPAAFSTLTTASVEESESTSSARRRDSGIGEETATGLGSHVE
VTPHTAPPGVSAGPDAISEVLSTLSLEVNKSPETKNDRGNDLDTKATPSVSVSKNVNVKD
ILRSLVNIPADGVTVDPALLPPACLGALGDLSVEQPVQFRSFDRSVIVAAKKSAVSPSTF
NTSIPTNAVSVVSSVDSAQASDMGGESPGSRSSNAKLPSVPTVDSVSQDPVSNMSITERL
EHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQ
EWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFESL
CAQYSADKREDEKMCDHLIRAAKYRDHVTATQLVQKIINILTDKHGAWGNSAVSRPREFW
RLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHVCIFKLRENSKATDEDILAKGKQSI
KSQALGNQNSENEILLEGDDDTLSSVDEKDLENLAGPVSLSTPAQLVAPSVVVKGTLSVT
SSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANR
VAVMFNFPDPATVKKVVNYLPRVGVGTSFGLPQTRRISLASPRQLFKASNMTQRWQHREI
SNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPIGALNPKR
AAFFAERYESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTF
SSISRAWRNSQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTS
EEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLNSITD
PVLREAVEAQIRSFGQTPSQLLIEPHPPRGSAMQVYLLLQSPLMFTDKAQQDVIMVLKFP
SNSPVTHVAANTQPGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLI
ASNTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDTGRLIQVVF
GHWDVVTCLARSESYIGGNCYILSGSRDATLLLWYWNGKCSGIGDNPGSETAAPRAILTG
HDYEVTCAAVCAELGLVLSGSQEGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCV
IFYENGLFCTFSVNGKLQATMETDDNIRAIQLSRDGQYLLTGGDRGVVVVRQVSDLKQLF
AYPGCDAGIRAMALSYDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8607 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaagacaatcgtgtcccttccccgccaccaacaggtgatgacgggggaggt
ggagggagagaagaaacccctactgaagggggtgcattgtctctgaaaccagggctcccc
atcaggggcatcagaatgaaatttgccgtgttgaccggtttggttgaagttggagaagta
tccaatagggatattgtagaaactgtctttaacctgttggtaggaggacagtttgatctg
gaaatgaatttcattatccaagaaggtgagagtattaactgcatggtggacctactggaa
aaatgtgacattacgtgccaagcagaagtctggagcatgtttacagccattctgaagaaa
agcatacggaatcttcaagtctgcactgaagtaggccttgttgaaaaagtgcttgggaaa
attgaaaaagttgacaatatgatagcagatcttttggttgacatgttgggagtgctggct
agctataatttgacagttcgcgagctaaagcttttcttcagtaaacttcaaggagataaa
ggacgatggcctccacatgctgggaagttgctgtctgtgttaaagcatatgcctcagaag
tatggtcctgatgccttttttaactttccaggaaagagtgctgcagctattgcattacct
cctatagccaaatggccataccagaatggttttacatttcatacatggcttagaatggat
cctgtaaataacatcaatgtagataaggataaaccatatttgtattgtttcagaaccagc
aaaggtcttggctattctgctcattttgttggaggctgtttgattataacatcaataaag
tcaaaaggaaaaggctttcaacactgtgtgaaatttgatttcaagccacaaaagtggtat
atggttaccatagtacacatctataaccgatggaagaatagtgaacttcgatgttatgtg
aatggtgagctggcttcctatggagagataacatggtttgtcaacactagcgataccttt
gacaaatgtttcttgggctcatcagaaacagcagatgctaatagagtattctgtggtcag
atgactgcagtttaccttttcagtgaagctctaaatgcagctcagatatttgctatttat
cagttgggcctgggatacaagggtacatttaaattcaaagcagaaagcgaccttttcctt
gctgagcatcacaaacttttattgtacgatgggaaactctctagtgccattgcattcacg
tacaatccacgggctacagatgcccagctttgtcttgaatcatctcctaaggacaaccct
tcaatttttgttcattcaccacatgcactcatgctccaggatgtaaaggcagttttaaca
cattccatccaaagtgcaatgcattcaattggaggagtacaagtactatttccacttttt
gcacagttggattacaggcaatatttgtctgatgagattgatttgactatatgttcaacc
ttgctggcctttgtcatggaattgttgaagaactcaattgctatgcaggaacagatgctt
gcctgtaagggcttcttggtaataggatatagccttgaaaagtcttccaaatctcatgtt
agcagagcagtacttgaactttgccttgcattttcaaaatatctgagtaatctgcagaat
gggatgcccctgctcaagcaattgtgtgatcacgttcttcttaatcctgccatatggatt
cataccccagccaaggttcaactgatgctctatacttatctgtccacggaattcattggt
acagtcaacatatataacaccattcggagagttggaacagtgcttctcatcatgcacacg
ctgaagtactactactgggcagtgaatcctcaggatcgaagtggtatcaccccaaaagga
ttagatggaccgcgacctaatcaaaaagaaatgctttctctacgagcattcttgttgatg
ttcattaagcaattagtgatgaaggattctggagtaaaggaagatgaattacaggccatt
cttaattacctactgactatgcatgaggatgacaatctaatggatgtcctacagctgctt
gttgcattaatgtcagaacaccctaactctatgattcctgcttttgaccaaaggaatggg
ttacgtgttatctacaaacttctggcatcgaaaagtgaaggaatcagggtacaagctctt
aaggcaatgggttattttttaaaacatctggccccaaagaggaaagcagaagtcatgctt
ggacatggattgttttcattgctagctgaaaggctcatgcttcagacaaatttaatcaca
atgaccacatataatgtgctgtttgagattcttatagaacagattggtactcaggtgata
cataaacagcatccagatcctgattcttcagtgaagatacaaaaccctcagatactaaaa
gtaattgcgaccctacttcgaaattctccccagtgcccagagagcatggaggttcacaga
gcctttctttctgacatgattaaactttttaataacagtagagaaaacaggaggagcttg
ctacaatgctctgtgtggcaagaatggatgctttctctctgctattttaatcctaagaat
tcagatgagcaaaagataacggaaatggtatacgccatattcagaatcctgctttaccat
gcagtcaaatatgagtggggtggctggcgtgtatgggtagacactttatcaatcactcat
tcaaaggtcacttttgaaatacacaaagaaaaccttgccaatatatttagggaacagcaa
ggaaaagttgatgaagaaatagggctgtgttcttcaacttcagttcaagcagcctctggc
attagaagggatattaatgtttcagtaggatcccagcaaccagatacgaaggattctcct
gtctgtcctcatttcaccacaaatggtaatgaaaattcaagtatagagaagacaagttca
ctagaatctgcatctaatattgaactgcaaactactaatacatcttatgaagaaatgaaa
gctgagcaagaaaatcaggagttaccagttgaaggcactttggaagaaacactgacaaat
gagacaaggaatgcagatgatttagaagtatcttctgacataatagaagctgtgactatt
tcctccaattcttttataacaactggcaaagattcaatgactgtcagtgaagtaactgct
tctataagttctccttcagaagaggatgcttcagagatgccagaattcttggataagtct
atagtagaggaagaggaagatgatgattatgtggaactgaaagtagaaggcagtcctact
gaggaagctaatctacccacagagctccaagataacagtttgtctccagctgcatctgaa
gccggtgaaaaactggacatgtttggtaatgatcacaaattaatatttcaagaaggaaaa
cctgttactgaaaagcaaactgatactgaaactcaagattctaaagattctggaattcag
actatgacagcatcagggtcttcagctgtgtcaccagaaactactgtttcccaaatagct
gtagaatcagaccttggtcagatgctggaggaagggaagaaagcaactaacctcactaga
gaaaccaaattaattaatgattgtcatggtagtgtctctgaggcttcttctgagcaaaag
attgcgaagttggatgtttccaatgttgctacagatactgagaggctggagttgaaggcc
agtcccaacgtggaagcacctcaacctcatcgacatgtgcttgagatatcaaggcaacat
gagcagccagggcaaggaatagcaccagatgcagttaatggacaaaggagggattccaga
tctactatgtttcgtattcctgagttcaactggtctcagatgcatcaacgtttgctcact
gatctattattttcaatagaaacagatatacagatgtggagaagccattcaacaaagaca
gttatggacttcgtgaatagcagtgataatgtcatctttgtacacaacacaattcatctc
atctctcaagtgatggacaatatggtcatggcttgtgggggtatactgccattgctttca
gctgctacatcggctacacatgaactggaaaatattgaacctactcaaggcctttcaata
gaagcctctgtgacatttttgcagaggctaattagccttgtggatgtgcttatatttgca
agttctcttggctttactgaaattgaagctgaaaaaagtatgtcatctggaggaattttg
cggcagtgtctccgactagtttgtgcagtagcagtaaggaattgcttggagtgtcaacag
cattcacaactgaaaactaggggagataaagccttgaaaccaatgcatagccttattcct
ttagggaaatctgcagcgaagagcccagtggacattgtgactggcggtatatctccagta
agagatcttgacaggcttctacaggacatggatattaatcggcttagggcagttgttttc
agagacatagaggatagcaaacaagctcaatttttagccttggcagtagtatactttatc
tctgttcttatggtctccaagtacagagacattttggaaccccaaaatgaaaggcatagc
cagtcatgtacagaaactggcagtgaaaatgaaaatgtatcactctctgaaatcacacca
gcagcattcagcactttaactacggcatcagtggaagaatctgaaagcacatcatctgct
cgaaggagggactcaggcattggggaagaaacagccactggtttaggaagccatgtggaa
gtaactcctcacacagcacctcctggtgtcagtgcaggcccagatgcaatcagcgaagtg
ctatctactctttctttagaagtcaataagtctccggaaaccaaaaatgatagaggaaat
gacttggacactaaggctacaccgtcagtttcagtttcaaaaaacgtcaatgtgaaagac
attctccgaagcttggttaacataccagcagatggagtcacagtggatcctgcccttctg
ccaccagcctgccttggagcccttggtgatctatctgtggaacaacctgtgcagttcaga
tcttttgacagaagtgtcattgttgcagcaaaaaagtcagcagtctcaccttccaccttt
aatacaagcatacctaccaatgctgtcagtgtggtttcctcagtagattcagcccaagcc
tcagatatgggaggagaatcaccaggcagtagatcatctaatgcaaaattgccctcagtt
ccaacagttgattcagtttcacaagatccggtttcaaatatgagtattacagagaggctt
gaacacgctttggaaaaggcagctcctctccttcgtgagatttttgtggattttgcacct
ttcctttctcggacacttttgggtagccatggacaagaactgcttatagaaggaacaagt
ctggtttgcatgaagtcgagtagttcagttgtggaattggttatgctactgtgttctcag
gagtggcaaaattctattcagaagaatgcaggccttgcttttatcgaacttgtcaatgaa
ggaaggttgcttagccagacaatgaaggatcatctagtaagagtagcaaatgaagctgaa
tttatcctgagcaggcagagagcagaagatattcacagacatgcggaatttgagtcactg
tgtgcccagtattctgcagacaaacgagaagatgagaagatgtgtgatcatttgataaga
gcagcaaaatatcgtgaccacgtgacagcaactcaactagtccagaaaattatcaacatt
ctcacagacaagcatggagcctggggaaattctgcagtgagtcgtcctcgtgagttctgg
cgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaaccctcta
ggatcgacacatcctgaagcgacactaaaaacagccgtggaacatgtgtgcatttttaaa
ttgagagagaacagcaaagccacagatgaagatatccttgctaaaggaaaacagtccatc
aagagtcaggctttaggaaatcagaactcagaaaacgagatcctcctggaaggcgatgat
gatactctgtcatccgtggatgagaaagatttagagaatcttgctggtcctgttagcctg
agcacaccagctcagcttgtggccccctctgttgtagtaaagggcactctttctgtcacc
tcctccgaactctattttgaggtggatgaagaggatcctaacttcaaaaaaatcgacccc
aagatcttggcgtatacagaagggctgcatggaaaatggctgttcacagagatacgatca
atcttttctcgtcgttatcttttgcaaaatacagccctggagatctttatggcaaacaga
gttgctgtgatgttcaacttcccagaccctgcaacagtaaagaaagtggttaactatcta
cctcgtgttggcgttggaacaagttttggattgcctcaaaccagacgtatttcattagct
agtccacgtcagctttttaaggcttctaatatgacccagcgatggcaacacagagagata
tctaattttgagtacttgatgtttctcaacacgatagcaggacggagttataatgactta
aatcagtatccagtgtttccttgggtcatcactaattatgaatcagaagaactggatctt
accttgcccaccaacttcagagatttgtccaagccaataggagctctgaacccaaaaaga
gcagcattcttcgctgagcgttacgaatcatgggaagatgatcaagttccaaagtttcac
tatggtactcattactcaactgcaagttttgttcttgcatggctgctaagaatagaaccc
tttacaacttatttcctaaatttgcaaggaggcaaatttgatcatgccgatcgaactttt
tcatcaatttccagagcttggcgaaacagtcagcgtgatacctctgatattaaggagttg
atccctgaattttattatctccctgagatgtttgtcaacttcaataattataatcttgga
gtgatggatgatgggacagtagtgtctgatgtcgaacttcctccttgggccaaaacctca
gaagaatttgttcacataaacagattggccctggagagtgaatttgtgtcctgccagctt
caccaatggattgatctcatttttggctataaacagcaaggaccagaagctgtccgagcc
ctcaatgtgttctattacttgacctatgaaggagctgtcaatctgaattcaataactgat
cctgtgttgagagaggctgttgaagctcaaatccgaagttttggacagactccttctcaa
ctactcatagagccccatcctcccagaggttctgccatgcaagtgtatctcctcctgcag
agtccattgatgttcacagacaaagcccagcaggatgttatcatggtcctcaagtttccc
tccaactcccctgttactcacgtggcagccaacacccagcctggtttggcaactcccgct
gtgatcacagtcactgctaacaggttatttgcagtgaacaaatggcacaaccttcctgct
catcaaggtgctgtacaagaccagccataccagctgccagtggaaatcgatcctctcata
gccagcaatacaggaatgcacaggaggcaaatcactgaccttttagaccaaagtattcaa
gtgcattcccagtgctttgtcatcacttcagacaaccgctatattctcgtctgtggcttc
tgggataagagtttcagagtctattctacagacacaggaagattgatccaagtggtgttt
ggccattgggatgtcgtcacttgccttgctcgttctgagtcatatattgggggaaattgc
tacattctctcagggtcacgtgatgcaactcttttgctgtggtattggaatggaaaatgc
agtgggattggagataacccaggcagtgagactgctgctcctcgggccattttgacaggc
catgactatgaggtcacatgtgctgcagtgtgtgccgagctaggcctggtgttgagtggt
tcacaagaaggaccatgtctcatacattccatgaatggagacttgttgaggaccttggag
ggtcctgaaaactgcctgaaaccaaaactcattcaggcttcaagagagggtcattgtgtc
atattctatgaaaacggcctcttctgtacattcagtgtgaatggaaaactccaggccacg
atggaaacagatgataacataagagccatccagctgagccgagatgggcagtacctgctc
acaggaggagacagaggagtggtcgtggtccggcaggtgtcggacctcaagcagctcttt
gcctatccaggatgcgacgctggaatccgggccatggcgctgtcttatgaccagaggtgc
atcatttctggcatggcttcaggaagcattgtgctattttacaacgactttaaccggtgg
catcatgaataccaaacccgctactga
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integrated database retrieval system
