Pan troglodytes (chimpanzee): 471866
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Entry
471866 CDS
T01005
Symbol
SOX4
Name
(RefSeq) transcription factor SOX-4
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
471866 (SOX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
471866 (SOX4)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
471866 (SOX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
471866
NCBI-ProteinID:
XP_527244
Ensembl:
ENSPTRG00000029832
VGNC:
3708
UniProt:
H2R7L3
A0A6D2XBP8
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All DBs
Position
6:24509198..24515046
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AA seq
474 aa
AA seq
DB search
MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGKADDPSWCKTPSGHIK
RPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHM
ADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGG
GGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAE
QAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAALAAPGKHLAEKKVKRVYLFG
GLGTSSSPVGGVGAGADPSDPLGLYEEEGAGCSPDAPSLSGRSSAASSPAAGRSPADHRG
YASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSSDDEFEDDLLDLNPSSNFESMSLG
SFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMISGDWLESSISNLVFTY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaaccaacaatgccgagaacacggaagcgctactggccggcgagagctcg
gactcgggcgccggcctcgagctgggaatcgcctcctcccccacgcccggctccaccgcc
tccacgggcggcaaggccgacgacccgagctggtgcaagaccccgagtgggcacatcaag
cgacccatgaacgccttcatggtgtggtcgcagatcgagcggcgcaagatcatggagcag
tcgcccgacatgcacaacgccgagatctccaagcggctgggcaaacgctggaagctgctc
aaagacagcgacaagatccctttcattcgagaggcggagcggctgcgcctcaagcacatg
gctgactaccccgactacaagtaccggcccaggaagaaggtgaagtccggcaacgccaac
tccagctcctcggccgccgcctcctccaagccgggggagaagggagacaaggtcggtggc
agtggcgggggcggccatgggggcggcggcggcggcgggagcagcaacgcggggggagga
ggcggcggtgcgagtggcggcggcgccaactccaaaccggcgcagaaaaagagctgcggc
tccaaagtggcgggcggcgcgggcggcggggtcagcaaaccgcacgccaagctcatcctg
gcaggcggcggcggcggcgggaaagcagcggctgccgccgccgcctccttcgccgccgaa
caggcgggggccgccgccctgctgcccctgggcgccgccgccgaccaccactcgctgtac
aaggcgcggactcccagcgcctcggcctccgcctcctcggcagcctcggcctccgcagcg
ctcgcggccccgggcaagcacctggcggagaagaaggtgaagcgcgtctacctgttcggc
ggcctgggcacgtcgtcgtcgcccgtgggcggcgtgggcgcgggagccgaccccagcgac
cccctgggcctgtacgaggaggagggcgcgggctgctcgcccgacgcgccaagcctgagc
ggccgcagcagcgccgcctcgtcccccgccgccggccgctcgcccgccgaccaccgcggc
tacgccagcctgcgcgccgcctcgcccgccccgtccagcgcgccctcgcacgcgtcctcc
tcggcctcgtcccactcctcctcttcttcctcctcgggctcctcgtcctccgacgacgag
ttcgaagacgacctgctcgacctgaaccccagctcaaactttgagagcatgtccctgggc
agcttcagttcgtcgtcggcgctcgaccgggacctggattttaacttcgagcccggctcc
ggctcgcacttcgagttcccggactactgcacgcccgaggtgagcgagatgatctcggga
gactggctcgagtccagcatctccaacctggttttcacctactga
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