Pan troglodytes (chimpanzee): 472670
Help
Entry
472670 CDS
T01005
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04120
Ubiquitin mediated proteolysis
ptr04137
Mitophagy - animal
ptr04144
Endocytosis
ptr04340
Hedgehog signaling pathway
ptr04350
TGF-beta signaling pathway
ptr04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
472670 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
472670 (SMURF1)
04350 TGF-beta signaling pathway
472670 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
472670 (SMURF1)
04137 Mitophagy - animal
472670 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
472670 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptr04131
]
472670 (SMURF1)
04121 Ubiquitin system [BR:
ptr04121
]
472670 (SMURF1)
03029 Mitochondrial biogenesis [BR:
ptr03029
]
472670 (SMURF1)
Enzymes [BR:
ptr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
472670 (SMURF1)
Membrane trafficking [BR:
ptr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
472670 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
472670 (SMURF1)
Ubiquitin system [BR:
ptr04121
]
Ubiquitin ligases (E3)
HECT type E3
472670 (SMURF1)
Mitochondrial biogenesis [BR:
ptr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
472670 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
472670
NCBI-ProteinID:
XP_003318656
Ensembl:
ENSPTRG00000019444
VGNC:
4509
UniProt:
K7CMM4
A0A6D2Y050
LinkDB
All DBs
Position
6:complement(108422909..108538865)
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPA
PYTDSTGAAAGGGNCRFVESPSQDQRLQAQRLRNPDVRGSLQTPQNRPHGHQSPELPEGY
EQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVD
HNNRTTQFTDPRLHHIMNHQCQLKEPSQPLPLPSEGSLEDEELPAQRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggacacgcaggaacggctccagcatcaagatccgtctgacagtgtta
tgtgccaagaaccttgcaaagaaagacttcttcaggctccccgacccttttgcaaagatt
gtcgtggatgggtctgggcagtgccactcaaccgacactgtgaaaaacacattggaccca
aagtggaaccagcactacgatctatatgttgggaaaacagattcgataaccattagcgtg
tggaaccataagaaaattcacaagaaacagggagctggcttcctgggctgtgtgcggctg
ctctccaatgccatcagcagattaaaagataccggataccagcgtttggatctatgcaaa
ctaaacccctcagatactgatgcagttcgtggccagatagtggtcagtttacagacacga
gacagaataggaaccggcggctcggtggtggactgcagaggactgttagaaaatgaagga
acggtgtatgaagactcggggcctgggaggccgctcagctgcttcatggaggaaccagcc
ccttacacagatagcaccggtgctgctgctggaggagggaactgcaggttcgtggagtcc
ccaagtcaagatcaaagacttcaggcacagcggcttcgaaaccctgatgtgcgaggttca
ctacagacgccccagaaccgaccacacggccaccagtccccggaactgcccgaaggctac
gaacaaagaacaacagtccagggccaagtttactttttgcacacacagactggagttagc
acgtggcacgaccccaggataccaagagaccttaacagtgtgaattgtgatgaacttgga
ccactgccaccaggctgggaagtcagaagtacagtttctgggaggatatattttgtagat
cataataaccgaacaacccagtttacagacccaaggttacaccacatcatgaatcaccag
tgccaactcaaggagcccagccagccgctgccactgcccagcgagggctctctggaggac
gaggagcttcctgcccagagatacgaaagagatctagtccagaagctgaaagtcctcaga
catgaactgtcgcttcagcagccccaagctggtcattgccgcatcgaagtgtccagagaa
gaaatcttcgaggagtcttaccgccagataatgaagatgcgaccgaaagacttgaaaaaa
cggctgatggtgaaattccgtggggaagaaggtttggattacggtggtgtggccagggag
tggctttacttgctgtgccatgaaatgctgaatccttattacgggctcttccagtattct
acggacaatatttacatgttgcaaataaatccggattcttcaatcaaccctgaccacttg
tcttatttccactttgtggggcggatcatggggctggctgtgttccatggacactacatc
aacgggggcttcacagtgcccttctataagcagctgctggggaagcccatccagctctca
gatctggaatctgtggacccagagctgcataagagcttggtgtggatcctagagaacgac
atcacgcctgtactggaccacaccttctgcgtggaacacaacgccttcgggcggatcctg
cagcatgaactgaaacccaatggcagaaatgtgccggtcacagaggagaacaagaaagaa
tacgttcggttgtatgtaaactggaggtttatgagaggaatcgaagcccagttcttagct
ctgcagaaggggttcaatgagctcatccctcaacatctgctgaagccttttgaccagaag
gaactggagctgatcataggcggtctggataaaatagacttgaacgactggaagtcgaac
acgcggctgaagcactgtgtggccgacagcaacatcgtgcggtggttctggcaagcggtg
gagacgttcgatgaagaaaggagggccaggctcctgcagtttgtgactgggtccacgcga
gtcccgctccaaggcttcaaggctttgcaaggttctacaggcgcggcagggccccggctg
ttcaccatccacctgatagacgcgaacacagacaaccttccgaaggcccatacctgcttt
aaccggatcgacattccaccatatgagtcctatgagaagctctacgagaagctgctgaca
gccgtggaggagacctgcgggtttgctgtggagtga
DBGET
integrated database retrieval system
