Pan troglodytes (chimpanzee): 474092
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Entry
474092 CDS
T01005
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptr03021
]
474092 (SCAF4)
03041 Spliceosome [BR:
ptr03041
]
474092 (SCAF4)
Transcription machinery [BR:
ptr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
474092 (SCAF4)
Spliceosome [BR:
ptr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
474092 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
474092
NCBI-ProteinID:
XP_003319088
Ensembl:
ENSPTRG00000013848
VGNC:
8670
UniProt:
H2QKY4
A0A6D2Y7E7
LinkDB
All DBs
Position
22:complement(32380179..32442076)
Genome browser
AA seq
1147 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQL
PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ
PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTA
TVPAAAAPAAASPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLP
PNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPC
IQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQE
RRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMI
PPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVT
YIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPK
PLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPP
PPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLS
IGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVI
GLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMP
PPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQ
QQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRN
DDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEK
PEVTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSG
SAAEAPR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcgcttatggatatgaaacctccc
atctctagagccaagatgattctcatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccgggattatatgtaattgactcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataactgccacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaat
ggagtgttcaaaattgaaattattcaacctcttttggacatggcagcaggaaccagtaat
gcagccccagtagcagaaaatgttaccaataatgaaggctcacctccacctccagtaaaa
gtttcttctgaacctcccacacaagccactccaaactccgtcccagctgtaccacagttg
cccagctctgatgcttttgctgctgtggctcagctgtttcagacaactcaaggccaacag
cttcagcagatccttcagacttttcaacagcctccaaaaccacagtctcctgcccttgac
aatgctgtgatggctcaggttcaggctatcacagctcagttaaagacaactcctacacaa
ccatctgaacaaaaagctgctttccccccacctgaacagaaaactgcatttgacaagaag
ttgcttgatagatttgactatgatgatgagccagaagctgtggaagaatcaaagaaagag
gataccactgccgtcaccacgacagcacctgctgccgcagtaccccctgcacccaccgcc
accgtgcctgctgctgctgcacccgctgctgcctctcctcctcctccacaggcaccattt
ggctttcctggagatggcatgcagcagccagcatacacacagcatcaaaatatggatcag
tttcagccacgaatgatgggaatacaacaggatccaatgcaccatcaggttccacttcct
cctaatggacaaatgccaggatttggacttcttcctacacctccatttcctcccatggct
cagcctgtgattcctccaactccaccagtgcagcagcctttccaagcttcttttcaggca
caaaatgaaccacttacacagaagccacatcagcaggaaatggaagtagaacaaccttgt
attcaagaggttaagcgacatatgtctgataacagaaagtcaagatctaggtcagcatcc
aggtcaccaaaaaggaggcgatctagatctggttctagatctcgaaggtctcggcatcga
cgttctcgatctcggtccagggatagacgccgacattctccccgatctcgatcccaagaa
agacgggatcgagaaaaagagagagaacgtcgacaaaaaggcctccctcaagtgaaaccg
gaaactgcaagtgtttgcagtactaccctctgggtggggcagctggacaaaagaactact
cagcaggatgttgccagtctcttggaagagtttggtccaattgaatcaattaatatgatt
cctcccaggggttgtgcctatattgttatggttcataggcaagatgcctatcgtgccctg
cagaaactgagccgaggaaactataaagtgaaccagaaatccataaagattgcctgggcc
ttaaacaaaggaataaaggcagattataagcagtattgggatgtagaacttggtgttact
tatattccatgggacaaagtcaagcctgaggaactcgagagtttttgtgaaggaggaatg
ttggacagtgacacacttaacccagattggaaaggaattcctaagaagcctgaaaatgaa
gttgctcaaaatggaggtgctgaaacctcacacacagaaccagtatcacccatacctaaa
ccattacctgtgcctgtccctcctattcctgttcctgcacctataacagtgccacctcca
caggtcccaccacatcaaccgggtccacctgtagttggtgctctccagccgcctgctttc
acgcctcctctgggaataccgcctccaggctttggtcctggtgttcctcctccccctcct
cctccaccatttttgcgcccaggattcaacccaatgcatttaccaccaggttttctgcct
cctggacccccacctcctataactccaccagtatccattcctcctcctcacactccacca
ataagcatcccaaactctactatcgctggtataaatgaagacactacaaaagacttatct
attggaaatcccattccaacagtggtgtctggggctagaggaaacgccgagtctggtgac
agcgtgaaaatgtatggctctgctgtgccacctgctgcacccacgaatctgcccacccct
cctgtaacccagcctgtttcacttcttggcactcaaggagttgcccctggtcctgtaatt
ggacttcaggcaccatctactggtcttcttggcgcccggcccggtctcatcccactccag
cgccctccaggaatgcccccacctcacttacagcggttccctttgatgccgccccgtccc
atgccaccgcacatgatgcacagaggcccaccgccaggaccagggggctttgcgatgcct
ccacctcatggaatgaaaggtcccttcccaccgcatggcccctttgttaggcctggtgga
atgccagggctcgggggcccagggccaggcccagggggtcctgaagacagagacggaagg
caacagccgccgcagcagccacagcagcagccacagccgcaggcgccccagcaaccacag
cagcagcagcagcagcagccaccaccatcacaacagcctccaccaacacagcagcagcca
cagcagtttagaaatgataacaggcagcagttcaattcaggtagagaccaagaaaggttt
ggaagaagatcttttggaaatagggtggaaaatgaccgggaacggtatgggaaccgtaat
gatgatagagataatagtaaccgtgacaggagagagtggggaaggaggagccctgaccgg
gacaggcacagagacttggaagagagaaatagacgctctagtgggcatcgagacagagag
agagattctagagatagagagtctcgtagagagaaggaagaagcccgaggaaaggaaaag
cctgaggtgacagacagggcaggtggtaacaaaaccgttgaacctcccattagccaagtg
ggaaatgtagacactgcttcagaacttgagaagggggtgtctgaggctgcagtcctaaag
ccttctgaagagttacctgctgaggctacctcatccgttgaacccgaaaaggattctggc
tcagcagcagaggctcctcgttag
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