Pan troglodytes (chimpanzee): 493952
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Entry
493952 CDS
T01005
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04820
Cytoskeleton in muscle cells
ptr05169
Epstein-Barr virus infection
ptr05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
493952 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
493952 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
493952 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
493952 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptr04812
]
493952 (VIM)
04147 Exosome [BR:
ptr04147
]
493952 (VIM)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
493952 (VIM)
Cytoskeleton proteins [BR:
ptr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
493952 (VIM)
Exosome [BR:
ptr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
493952 (VIM)
Exosomal proteins of other cancer cells
493952 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF573
TolA_bind_tri
RBD-FIP
CENP-F_leu_zip
Laminin_II
Motif
Other DBs
NCBI-GeneID:
493952
NCBI-ProteinID:
NP_001009148
Ensembl:
ENSPTRG00000002328
VGNC:
5877
UniProt:
Q5R1W8
LinkDB
All DBs
Position
10:17702162..17710488
Genome browser
AA seq
466 aa
AA seq
DB search
MSIRSVSSSSYRRMFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGV
YATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEE
EIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESTEYRRQVQSPTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggcccgggcacc
gcgagccggccgagctccagccggagctacgtgactacgtccacccgcacctacagcctg
ggcagcgcgctgcgccccagcaccagccgcagcctctatgcctcgtccccgggcggcgtg
tatgccacgcgctcctctgccgtgcgcctgcggagcagcgtgcccggggtgcggctcctg
caggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctgaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaataagatcctgctggccgagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcag
gtggaccagctaaccaacgacaaagcccgcgtcgaggtggagcgcgacaacctggccgag
gacatcatgcgcctccgggagaaattgcaggaggagatgcttcagagagaggaagccgaa
aacaccctgcagtctttcagacaggatgttgacaatgcgtctctggcacgtcttgacctt
gaacgcaaagtggaatctttgcaagaagagattgcctttttgaagaaactccacgaagag
gaaatccaggagctgcaggctcagattcaggaacagcatgtccaaatcgatgtggatgtt
tccaagcctgacctcacggctgccctgcgtgatgtacgtcagcaatatgaaagtgtggct
gccaagaacctgcaggaggcagaagaatggtacaaatccaagtttgctgacctctctgag
gctgccaaccggaacaatgacgccctgcgccaggcaaagcaggagtccactgagtaccgg
agacaggtgcagtcccccacctgtgaagtggatgcccttaaaggaactaatgagtccctg
gaacgccagatgcgtgaaatggaagagaactttgccgttgaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaatatgaaggaggaaatggctcgtcacctt
cgtgaatatcaagacctgctcaatgttaagatggcccttgacattgagattgccacctac
aggaagctgctggaaggcgaggagagcaggatttctctgcctcttccaaacttttcctcc
ctgaacctgagggaaactaatctggattcactccctctggttgatacccactcaaaaagg
acacttctgattaagacggttgaaactagagatggacaggttatcaacgaaacttctcag
catcacgatgaccttgaataa
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