Pan troglodytes (chimpanzee): 553154
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Entry
553154 CDS
T01005
Symbol
PCDHB8
Name
(RefSeq) protocadherin beta-8 precursor
KO
K16494
protocadherin beta
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptr04515
]
553154 (PCDHB8)
Cell adhesion molecules [BR:
ptr04515
]
Cadherins
Protocadherins
553154 (PCDHB8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
553154
NCBI-ProteinID:
NP_001019303
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Position
4:138893023..138895615
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AA seq
801 aa
AA seq
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MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF
SRRGVRVVSRGNKLHLQLNQETGDLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA
ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDVGQNNIENYIISPNSYFR
VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA
PEFEQPFYRAQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFTVDFLTG
EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN
APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV
TITVTDLGTPGLTTHLNMTVLVSDVNDNAPAFTQASYTLFVRENNSPALHIGSVSATDRD
SGTNAQVTYSLLPPQNPHLPLASLVSINTDKGHLFALRSLDYEALQAFEFRVGASDRGSP
ALSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLH
VLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA
ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF
GPEMEQNSNFRNGFGFSLQLK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagcgggaagctcatttgcagacaaaggcaagtccttttttcctttctcctt
ttgggcttatctctggcgggcgcggcggaacctagaagctattctgtggtggaggaaact
gagggcagctcctttgtcaccaatttagcaaaggacctgggtctggagcagagggaattc
tccaggcggggggttagggttgtttccagagggaacaagctacatttgcagctcaatcag
gagaccggggatttgttgctaaatgagaaattggaccgtgaggatctgtgcggtcacaca
gagccctgtgtgctacgattccaagtgttgctagagagtcccttcgagttttttcaagct
gagctgcaagtaatagacataaacgaccactctccagtatttctggacaaacaaatgttg
gtgaaagtatcagagagcagtcctcctgggactgcgtttcctctgaagaatgctgaagac
ttagatgtaggccaaaacaatattgagaactatataatcagccccaactcctattttcgg
gtcctcacccgcaaacgcagtgatggcaggaaatacccagagctggtgctggacaaagcg
ctggaccgagaggaagaagctgagctcaggttaacactcacagcactggatggtggctct
ccgcccagatctggcactgctcaggtctacattgaagttgtcgatgtcaacgataatgcc
cctgaatttgagcagcctttctatagggcgcagatctctgaggacagtccaataagcttc
ctggttgtgaaggtctctgccacggatgtagacacaggagtcaacggagagatttcctat
tcacttttccaagcttcagatgagataagcaaaacttttacggtcgatttcttgacagga
gaaattcgactaaagaaacaacttgatttcgaaaaatttcagtcctatgaagtcaatatc
gaggcgagagatgctggaggcttttctggaaaatgcaccgttctgattcaagtgatagat
gtgaacgaccatgccccagaagttaccatgtctgcatttaccagcccaatacctgagaat
gcgcctgaaactgtggttgcacttttcagtgtttcagaccttgattcaggagaaaatggg
aaaataagttgctccattcaggaggatctacccttcctcctgaaatcttctgtggggaac
ttttacaccctactaacggagacaccactagacagagaaagcagagccgagtacaacgtc
actatcaccgtcactgacttagggacacccgggctgacaacacatctcaatatgaccgtg
ctggtgtcggacgtcaatgacaacgcccccgccttcacccaagcctcctacaccctgttc
gtccgcgagaacaacagccccgccctgcacatcggcagcgtcagcgccacagacagagac
tcaggcaccaacgcccaggtcacctactcgctgctgccgccccagaacccgcacctgccc
ctcgcctccctggtctccatcaacacagacaacggccacctgttcgccctcaggtccctg
gactacgaggccctgcaggcgttcgagttccgggtgggcgcttcagaccgcggctccccg
gcgctgagcagcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgccc
ttcgtgctgtacccgctgcagaatagctccgcgccctgcaccgagctggtgccccgggcg
gccgagccgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaac
gcctggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggtgtgtgggcg
cacaatggggaggtgcgcaccgccaggctgttgagcgagcgcgacgcagccaagcagagg
ctggtggtgctggtcaaggacaatggcgagcctccgtgctcggccaccgccacgctgcac
gtgctcctggtggacggcttctcccagccctacctgccgcttccggaggctgccccagcc
cagggccaggccgactctctcaccgtctacctggtggtggcgttggcctcggtgtcttcg
ctcttcctcttctcggtgctcctgttcgtggcggtgcggctgtgcaggaggagcagggcg
gcctcggtgggtcgctgctcagtgcctgagggcccctttccagggcatctggtggacgtg
aggggcaccgggagcctgtctcagaactatcagtacgaggtgtgcctggcaggaggctca
gggacgaatgagttccagttcctgaaaccagtattacctaatattcagggccattctttt
gggccagaaatggaacaaaactctaactttaggaatggctttggtttcagccttcagtta
aagtaa
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