Pan troglodytes (chimpanzee): 736229
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Entry
736229 CDS
T01005
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X5
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
736229 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
736229 (PAN3)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
736229 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
736229 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
Pkinase
zf-CCCH_4
Torus
Motif
Other DBs
NCBI-GeneID:
736229
NCBI-ProteinID:
XP_001136622
Ensembl:
ENSPTRG00000005742
VGNC:
7299
UniProt:
H2RA81
A0A6D2XZD6
LinkDB
All DBs
Position
14:27304707..27461961
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AA seq
887 aa
AA seq
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MNSGGGLPPTSAAASPSSSSLAAAVAVVAPPGVGGVPGGAAVGVKLKYCRYYAKDKTCFY
GEECQFLHEDPAAGAAPGLGLHSNSVPLALAGAPVAGFPPGAVAGGGAGPPPGPKKPDLG
DPGTGAAAGGGGSSGGLDGPRLAIPGMDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKY
PLMQRMTNSSSSPSLLNDSAKPYSAHDPLTSPASSLFNDFGALNISQRRKPRKYRLGMLE
ERLVPMGSKARKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGST
SRLSNVSQSNMSAFSQVFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRR
SHTPNPASYMVPSSASTSVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPN
YHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYH
SLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMW
KKIQHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNADAYFTKRKWGQH
DGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNCVG
VFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTIN
YSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRL
FRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLN
KLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcggcctcccgcccacctcggccgccgcctccccttcctcctcctcg
ctggcggcggcggtggcggtggtggccccgccgggggtcgggggtgtccccggcggggcg
gcggtaggagtgaagctgaagtactgccgctactacgctaaggataagacttgcttctac
ggggaggagtgtcagttcctgcatgaggaccctgccgccggggctgccccgggcctcggc
ctccatagcaacagcgtccccctggctctggctggtgcacccgtggccggctttccgccg
ggagccgtcgcgggcgggggagctgggccgccccccgggcccaagaagccggacctgggg
gacccggggaccggagccgcagccggcggaggaggcagcagcgggggactcgatggaccg
cgcctggcaattccaggaatggatggaggtgctttaactgatacaagtctcacagattcc
tattttagcaccagctttattggagtcaatggatttggaagccctgtagaaacaaaatat
cccctgatgcagagaatgactaatagtagcagctccccaagccttctaaatgacagtgcc
aagccatattcagcccatgatcctctaacatcacctgcttcatccttgtttaatgacttt
ggtgccctcaacatctctcagagacgaaagccaaggaagtatcgcctggggatgctggag
gagaggctagttccgatgggatcaaaggcacgaaaagcaaagaaccctattggctgcctt
gctgacaggtgtaaatcaggagtacccatcaatatggtttggtggaacagagtcacagaa
aacaatttacagacaccaaatcctactgcaagcgagtttattcctaaaggaggatcaacc
tccaggctgagtaacgtgtcccagtcaaatatgtctgccttctctcaagttttctctcac
ccatccatgggaagccctgctactgctggattagcgccaggaatgtcgttgtctgctggg
tcttcccctcttcattcccccaagattactccacatacttctcctgctcccagaagaaga
agtcacactccaaatccagcaagttacatggtgccttctagtgcctctacatctgttaat
aatcctgtttctcagactccgtcttctggtcaggtgatccaaaaggaaactgttggtggg
acgacttacttctatacagacacaactccagcacctttgactggaatggtgtttccaaac
tatcatatttatcctccaactgcacctcacgttgcttatatgcaaccgaaagcaaatgca
ccttccttcttcatggctgatgaactccgacaggagctgatcaacagacatttaataaca
atggctcaaattgatcaagcagatatgccagcagttcctacagaggttgacagctaccat
agcctattccctctagaaccactgccacctcccaaccggatacagaaatcaagtaatttt
gggtatattacgtcttgctacaaagctgtaaatagcaaagatgatctgccatattgcctt
cggaggatacatggttttcgtcttgttaacacaaagtgcatggtgttggtcgacatgtgg
aagaaaattcaacactcaaatatcgtaactttgcgcgaagtatttaccactaaagcattt
gctgagccctctcttgtgtttgcatatgatttccatgctggaggagaaactatgatgagc
agacactttaatgaccctaatgctgatgcctacttcaccaagagaaagtggggtcagcac
gatggaccattgcccaggcagcatgctggattattgccagaatctcttatttgggcatat
attgtccaactaagttctgcattgcgtaccattcatacagcaggtttggcatgtcgagtt
atggatccaacaaagattctgataactggcaaaacaaggttgcgagtaaattgtgttgga
gtttttgatgttttaacatttgataacagtcaaaataataatccattggcattaatggcc
cagtaccagcaagcagatctgatatcattaggaaaagttgtgttggctttggcttgcaac
tctttggcaggaattcagcgagagaatttacagaaagccatggaactggtgacaatcaac
tattcctctgacctgaagaatctgattttgtatttgttgactgaccaaaacaggatgcga
agtgtaaatgacatcatgcccatgattggtgctcgattttatactcaattggatgctgct
caaatgagaaatgatgtcatagaggaagaccttgcaaaggaggttcaaaatggaagactg
tttaggctcctagcaaaattgggaacaatcaatgagaggccggagtttcagaaggatccc
acttggtcagagactggagaccgttatctgttgaaactctttagggatcatctttttcat
caggtgacagaagcaggtgctccctggattgacctcagtcatataatttcttgtcttaac
aagctagatgctggtgtgccagaaaaaataagcctgatttccagagatgagaagagtgta
cttgtggtgacctacagtgacttaaagcgctgctttgaaaatacttttcaagaactgatt
gcagctgcaaatggtcagttgtag
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