Pan troglodytes (chimpanzee): 737845
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Entry
737845 CDS
T01005
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
737845 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptr03041
]
737845 (PRPF38B)
Spliceosome [BR:
ptr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
737845 (PRPF38B)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
737845
NCBI-ProteinID:
XP_001145049
Ensembl:
ENSPTRG00000001032
VGNC:
1472
UniProt:
H2PZJ2
A0A6D2X9R8
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All DBs
Position
1:complement(122793397..122803815)
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AA seq
546 aa
AA seq
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MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGATKPAVSGKQGNVLPLWGNEKTMNLNP
MILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVG
TGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFES
FLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRKI
KKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKE
RQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKEN
ERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSK
KEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTD
SVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHK
NKDETV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggctgca
gctgcggctcagcaacagcagcagtgcggcggcggcggcgccaccaagccggcggtctcc
ggcaagcagggcaatgtgctcccgctctggggcaacgagaagaccatgaacctcaacccc
atgatcctgaccaacatcctgtcgtcgccttacttcaaagtacagctctacgagctcaag
acctaccacgaggtggtggacgagatctactttaaggtcacgcacgttgaaccatgggag
aaaggaagcaggaaaacagcgggccagacagggatgtgcggaggggttcgaggtgttgga
acaggaggaattgtttctacagcattttgcctgttatacaaattatttaccctgaagtta
actcgaaagcaagtgatgggtcttataacacacacagactctccatatattagagcgctt
ggatttatgtatataagatatacacagccccctacagatctgtgggactggtttgaatcc
ttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatgaccatt
ggagaaatgctacgatcttttctcacaaaactggagtggttttctaccttgtttccaaga
attccagttccagttcaaaagaatattgatcaacagattaaaacccgacctagaaaaatc
aagaaagatgggaaggaaggtgctgaggaaatagacagacatgttgaacgcagacgttca
aggtctccaaggagatctctgagtccacggaggtccccaagaaggtcaagaagtagaagt
catcatcgggagggccatgggtcttctagttttgacagagaattagaaagagagaaagaa
cgccagcgactagagcgtgaagccaaagaaagggagaaagaacggcgaagatcccgaagt
attgaccgggggttagaacgcaggcgcagcagaagtagggaaaggcatagaagtcgcagt
cgaagtcgtgataggaaaggggatagaagggacagggatcgagaaagagagaaagaaaat
gagagaggtagaagacgagatcgtgactatgataaggaaagaggaaatgaacgagaaaaa
gagagagagcgatcaagagaaaggtccaaggaacagagaagtaggggagaggtagaagag
aagaaacataaagaagacaaagatgataggcggcacagagatgacaaaagagattccaag
aaagagaaaaaacacagtagaagcagaagcagagaaaggaaacacagaagtaggagtcga
agtagaaatgcagggaaacgaagtagaagtagaagcaaagagaaatcaagtaaacataaa
aatgaaagtaaagaaaaatcaaataaacgaagtcgaagtggcagtcaaggaagaactgac
agtgttgaaaaatcaaaaaaacgggaacatagtcccagcaaagaaaaatctagaaagcgt
agtagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggaccagtcagac
aaacatgatcgtcgaaggagccaaagtatagaacaagagagccaagaaaaacagcataaa
aacaaagatgagactgtgtga
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