Pan troglodytes (chimpanzee): 739795
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Entry
739795 CDS
T01005
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptr03041
]
739795 (PRPF39)
Spliceosome [BR:
ptr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
739795 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
739795
NCBI-ProteinID:
XP_001151081
Ensembl:
ENSPTRG00000006304
VGNC:
3325
UniProt:
H2R2U4
A0A6D2W8V4
LinkDB
All DBs
Position
15:43162967..43194440
Genome browser
AA seq
669 aa
AA seq
DB search
MQNSHMDEYRNSSNGSTGNSSEVVVEHPTDFSTEIMNVTEMEQSPDDSPNVNASTEETEM
ASAVDLPVTLTETEANFPPEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDR
FFIHYPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPG
DPETNNTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLY
SHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPA
KLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL
EFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKK
PMVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNLEEAEHLLQD
AIKNAKSNNESSFYAVKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSG
DLKQNEENILNCFDKAVHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKE
QDSLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAVYNYSAWYQYNYQNPWNY
GQYYPPPPT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgaatacagaaattctagtaatggcagcacaggcaacagt
tcagaggtagtggtagaacatcctactgatttcagtactgagattatgaacgttacagaa
atggaacagtcacctgatgactctcccaatgtgaatgcatctacagaagaaactgaaatg
gcaagtgctgtggaccttccagtgacgctgacagaaacagaagcaaatttccctccggaa
tatgaaaaattttggaaaactgtagaaaataatcctcaggattttacaggctgggtatat
ttgcttcaatatgtagaacaggagaatcacttgatggctgccaggaaggcatttgacaga
tttttcatacactatccttattgctatggttactggaaaaagtatgcagaccttgaaaag
cggcacgacaacattaaaccatcagatgaggtttatcggcgggggcttcaggcaatacct
cttagtgttgacctttggatacattatataaacttcttaaaagaaacattggaccctggt
gatcctgagacaaacaatacaataagaggaacttttgagcatgctgttctagctgcagga
acagatttccgttctgacagactgtgggaaatgtatataaactgggaaaatgagcaggga
aacctgagagaagttacagctatatatgatcgtattcttggtattccaacacagctgtat
agtcatcattttcagagatttaaagaacatgtacagaataatttgcctagagatctttta
actggtgaacagtttattcagttgcgaagggaattagcttctgtaaatggtcatagtggt
gatgatggtcctcctggtgatgatctaccatcgggaattgaagacataaccgatcctgca
aagctaattacagaaatagaaaacatgagacatagaatcattgagattcatcaagaaatg
tttaattataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaaga
ccttactttcatgtgaaacctttggaaaaggcacaactaaaaaactggaaagaatactta
gaatttgaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtc
atatcatgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccat
agcattgaaggagtgaggcatgtcttcagcagagcttgtactatacatctcccaaagaaa
cccatggtgcatatgctttgggcagcttttgaggaacagcagggtaatattaatgaagcc
aggaatatcttgagaacatttgaagaatgtgttctaggattggcaatggttcgtttacga
agagtaagtttagaacgacggcatggaaatctggaagaagctgaacatttgcttcaggat
gccattaagaatgccaaatcaaataatgaatcttcattttatgctgtcaaactagcccgg
catcttttcaaaatacagaaaaaccttccaaaatcaagaaaggtgcttttggaagcaatc
gaaagagacaaagagaacacaaagttatacctcaatttacttgaaatggaatatagtggt
gacctcaaacaaaatgaagaaaatatcctaaattgttttgacaaagctgtacatggttca
ttacctattaaaatgagaattacattttctcagagaaaagtggaatttcttgaagatttt
ggttccgatgttaataagcttctgaatgcttatgatgaacatcaaacactcctgaaagaa
caggattctttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagca
catacagaagatacaacttcatcatctacacagatgattgatggtgatttacaggcaaac
caagctgtatataattatagtgcatggtatcaatacaattatcagaatccttggaattat
ggacaatattatcctccccctccaacctga
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