KEGG   Pan troglodytes (chimpanzee): 740020
Entry
740020            CDS       T01005                                 
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    740020 (EXOSC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    740020 (EXOSC5)
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     740020 (EXOSC5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 740020
NCBI-ProteinID: XP_001152170
Ensembl: ENSPTRG00000011024
VGNC: 2556
UniProt: H2R632 A0A6D2XPW1
LinkDB
Position
20:complement(44410507..44421894)
AA seq 235 aa
MEEEMHTDAKIRAESGTGSSPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGTLHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLVLDPTSKQEKEARAV
LTFALDSVERKLLMSSTKGLYSDTELQQCLAAAQAASQHVFRFYRESLQRRYSKS
NT seq 708 nt   +upstreamnt  +downstreamnt
atggaggaggagatgcatactgacgccaaaatccgcgctgaaagtggaacagggtccagc
cctcggggtcctggctgcagcctccggcactttgcctgcgaacagaacctgctgtcgcgg
ccagatggctctgcttccttcctgcaaggtgacacctctgtcctggcgggtgtgtacggg
ccggccgaggtgaaggtcagcaaagagattttcaacaaggccacactcgaagtgatcctg
aggccgaagatcgggctgcctggtgttgcagagaagagccgggagcggctgatcaggaac
acgtgcgaggcggtggtgctgggcacgttgcacccccgcacctccatcaccgtggtgctg
caggttgtcagcgatgccggctctcttctggcctgttgtctgaatgctgcctgcatggca
ttggtggatgcaggtgtgcccatgcgggctctcttctgtggggtcacctgtgccctggac
tctgatgggaccctcgtgctggatcctacatccaagcaagaaaaggaggcccgggcagtc
ctgacctttgccctggacagcgtggaacggaagctgctgatgtccagcaccaaggggctc
tactcagacactgagctccagcagtgcctggctgcggcccaggccgcttcgcaacacgtc
ttccgtttctaccgggaatcgctgcagaggcgttactccaagagctga

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